Contig 011911:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E24Sequence565011911 (7)gb|KDO58886.1|3e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]744008442 (9)ref|XP_009765510.1|1e-80PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl
JMFF012O02Sequence523011911 (7)gb|KDO58886.1|2e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]611008442 (9)ref|XP_009625495.1|9e-58PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF029C09Sequence483011911 (7)gb|KDO58886.1|2e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]739008442 (9)ref|XP_009625495.1|7e-75PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF037O16Sequence573011911 (7)ref|XP_010046605.1|50.1PREDICTED: uncharacterized protein LOC104435580, partial [Eucalyptus grandis]738008442 (9)ref|XP_009625495.1|7e-79PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF039I06Sequence623011911 (7)gb|KDO58886.1|4e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]630008442 (9)ref|XP_009765510.1|7e-59PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl
JMFS164D04Sequence624011911 (7)gb|KDO58886.1|4e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]
JMSF008A05Sequence264011911 (7)766008442 (9)ref|XP_009625495.1|2e-84PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFS164D04+           TCCAATTGAGCTCTCGAAAGCAATCGAAGGCCCTTTCCATTAGGATCAGCAAAGATTCCG
JMFF039I06+                                          CCTTTCCATTAGGATCAGCAAAGATTCCG
                      ____________________________________________________________
consensus             TCCAATTGAGCTCTCGAAAGCAATCGAAGGCCCTTTCCATTAGGATCAGCAAAGATTCCG
 
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JMFS164D04+           GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF007E24+                                       TCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF039I06+           GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF037O16+                                     CTTCTCATACCCTTCGAATCCAATGGGAGACACA
                      ____________________________________________________________
consensus             GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
 
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JMFS164D04+           GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF007E24+           GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF012O02+                      CGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF029C09+                                                              TAGGGGGAC
JMFF039I06+           GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF037O16+           GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
                      ____________________________________________________________
consensus             GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
 
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JMFS164D04+           AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF007E24+           AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF012O02+           AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF029C09+           AAAAGCAGCAAANCAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF039I06+           AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF037O16+           AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
                      ____________________________________________________________
consensus             AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
 
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JMFS164D04+           AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF007E24+           AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF012O02+           AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF029C09+           AATCCTAAAGGCAGCACACGTCTNGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF039I06+           AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF037O16+           AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
                      ____________________________________________________________
consensus             AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
 
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JMFS164D04+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF007E24+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF012O02+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF029C09+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF039I06+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF037O16+           ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATTCCCT
                      ____________________________________________________________
consensus             ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
 
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JMFS164D04+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF007E24+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF012O02+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF029C09+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF039I06+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF037O16+           CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMSF008A05+                                               GGAGCTTCGTAGAATAAGGACGAT
                      ____________________________________________________________
consensus             CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
 
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JMFS164D04+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF007E24+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF012O02+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF029C09+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF039I06+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF037O16+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMSF008A05+           TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
                      ____________________________________________________________
consensus             TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
 
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JMFS164D04+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF007E24+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF012O02+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF029C09+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF039I06+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF037O16+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMSF008A05+           AAGTTGGGATTTTTATGAACCCAGTGACTCCCCATGGCTATCGGAACCGCGCCCAGATCA
                      ____________________________________________________________
consensus             AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
 
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JMFS164D04+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF007E24+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF012O02+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF029C09+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF039I06+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF037O16+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMSF008A05+           ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
                      ____________________________________________________________
consensus             ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
 
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JMFS164D04+           TCTTCGAGAGAACGAGAGATTTCAG                                   
JMFF007E24+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGT        
JMFF012O02+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGT        
JMFF029C09+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT     
JMFF039I06+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT     
JMFF037O16+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT     
JMSF008A05+           TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTATGAGCC
                      ____________________________________________________________
consensus             TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTATGAGCC