Contig 011908:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS094G04+                                                           GATGGAGCTCCA
                      ____________________________________________________________
consensus                                                             GATGGAGCTCCA
 
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JMFS094G04+           CCGCCCAAACGACACGTGGATTCTTCAAGGTGGATGAATCATCCCTTTATTCGCCTTCAT
                      ____________________________________________________________
consensus             CCGCCCAAACGACACGTGGATTCTTCAAGGTGGATGAATCATCCCTTTATTCGCCTTCAT
 
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JMFS094G04+           GGTGTTCGACCTTTCTTTTCTGCGAGCGTATCCAGTTCCCTTCGTTACCGAAGGCGAGTA
                      ____________________________________________________________
consensus             GGTGTTCGACCTTTCTTTTCTGCGAGCGTATCCAGTTCCCTTCGTTACCGAAGGCGAGTA
 
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JMFS094G04+           ATCAGCATCGTCGTAAGGTATGTCAGACCGATCTCCGCCTTTTTTTGCACTCAATGATTG
                      ____________________________________________________________
consensus             ATCAGCATCGTCGTAAGGTATGTCAGACCGATCTCCGCCTTTTTTTGCACTCAATGATTG
 
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JMFS094G04+           CTCGGGATCCTTTTCCTTCCACTCGGGCTTCCTTTTGCGGACCACATGTTGCCATATGTT
                      ____________________________________________________________
consensus             CTCGGGATCCTTTTCCTTCCACTCGGGCTTCCTTTTGCGGACCACATGTTGCCATATGTT
 
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JMFS094G04+           TTTCAGTGCCTCTATACGGACCGGCTTGATCAGATAATCACACGCACCGTGCGTAACGCC
JMFF050B02+                                                   CACGCGCCGTGCGTAACGCC
                      ____________________________________________________________
consensus             TTTCAGTGCCTCTATACGGACCGGCTTGATCAGATAATCACACGCGCCGTGCGTAACGCC
 
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JMFS094G04+           CTTCATCGCAACGTTCGTGCTATCGTCGGGTGACATCATAATAACGGGCAGGTCCATCTG
JMFF050B02+           CTTCATCACAACGTTCTTGCTATCGTCGGCTGACATCATAATAACGGGCAGGTCCATCTC
JMSF032P07+                                          GACATCATAATAACGGGCAGGTCCATCTC
                      ____________________________________________________________
consensus             CTTCATCGCAACGTTCTTGCTATCGTCGGGTGACATCATAATAACGGGCAGGTCCATCTC
 
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JMFS094G04+           GAGACCGACATGCTCAAGAAGTTTGAAACCGTCCATGTCGGGCATATGGACATCACTTAT
JMFF050B02+           GAGACCGACATGCTCAAGAAGTTTGAAACCGTCCATGTCGGGCATATGGACATCACTTAT
JMFF037C13+                   CATGCTCAAGAAGTTTGAAACCGTCCATGTCGGGCATATGGACATCACTTAT
JMSF032P07+           GAGACCGACATGCTCAAGAAGTTTGAAACCGTCCATGTCGGGCATATGGACATCACTTAT
                      ____________________________________________________________
consensus             GAGACCGACATGCTCAAGAAGTTTGAAACCGTCCATGTCGGGCATATGGACATCACTTAT
 
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JMFS094G04+           AACGATATCAAAGCCACTCTTATTTTCCCGAAGCAACGATAGAGCAAGCTCTGCCCTACT
JMFF050B02+           AACGATATCAAAGCCATTCTTATTTTCCCGAAGCAACGATAGAGCAAGCTGTGCCCTATT
JMFF037C13+           AACGATATCAAAGCCATTNTTATTTTCCCGAAGCAACGATAGAGCAAGCTNTGCCCTATT
JMSF032P07+           AACGATATCAAAGCCATTCTTATTTTCCCGAAGCAACGATAGAGCAAGCTNTGCCCTATT
                      ____________________________________________________________
consensus             AACGATATCAAAGCCATTCTTATTTTCCCGAAGCAACGATAGAGCAAGCTGTGCCCTATT
 
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JMFS094G04+           GGACTTGGTTACTTCATAGAGGCAGGTCCTAAGCATATTCTCCAAGATCATGAGGCAAGT
JMFF050B02+           GGACTTGGTTACTTCATAGAGGCAGGTCCTAAGCATCTTCTCCAAGATCCTGAGGCAAGT
JMFF037C13+           GGACTTGGTTACTTCATAGAGGCAGGTCCTAAGCATNTTNTCCAAGATCCTGAGGCAAGT
JMSF032P07+           GGACTTGGTTACTTCATAGAGGCAGGTCCTAAGCATNTTNTCCAAGATCCTGAGGCAAGT
                      ____________________________________________________________
consensus             GGACTTGGTTACTTCATAGAGGCAGGTCCTAAGCATCTTCTCCAAGATCCTGAGGCAAGT
 
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JMFS094G04+           TGGGTCATCATCC                                               
JMFF050B02+           TGGGTCATCATCCACAACCAGCACCCGGAGACCCGCCGGAAACTTGTCGGAGACCGCATC
JMFF037C13+           TGGGTCATCATCCNCAACCAGCNCCCGGAGACCCGCCGGAAACTTGTCGGAGACCGCATC
JMSF032P07+           TGGGTCATCATCCACAACCAGCACCCGGAGACCCGCCGGAAACTTGTCGGAGACCGCATC
                      ____________________________________________________________
consensus             TGGGTCATCATCCACAACCAGCACCCGGAGACCCGCCGGAAACTTGTCGGAGACCGCATC
 
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JMFF050B02+           ACCGGACTTCCAAGAGGCGTTTGAGCACGTAGCCGACATCCCCTTTCCCACTTGACCACC
JMFF037C13+           NCCGGACTTCCAAGAGGCGTTTGAGCACGTAGCCGACATCCCCTTTCCCACTTGACCNCC
JMSF032P07+           NCCGGACTTCCAAGAGGCGTTTGAGCACGTAGCCGACATCCCCTTTCCCACTTGACCNCC
                      ____________________________________________________________
consensus             ACCGGACTTCCAAGAGGCGTTTGAGCACGTAGCCGACATCCCCTTTCCCACTTGACCACC
 
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JMFF050B02+           ACCTAGATTCATTCTTTTTTTTTTCTTTTCTTTTCTCCCCTTCACTATTCAGCTCATATA
JMFF037C13+           NCCTAGATTCATTCTTTTTTTTTTCTTTTCTTTTCTCCCCTTCACTATTCAGCTCATATA
JMSF032P07+           ACCTAGATTCATTCTTTTTTTTTTCTTTTCTTTTCTCCCCTTCACTATTCAGCTCATATA
JMSF006N12+                                           TTCTCCCCTTCACTATTCAGCTCATATA
                      ____________________________________________________________
consensus             ACCTAGATTCATTCTTTTTTTTTTCTTTTCTTTTCTCCCCTTCACTATTCAGCTCATATA
 
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JMFF050B02+           TAAATATACTACATCCAATTTATGGTAAGTACAAAATTAAGGTGAAATTGAGAAGTACCC
JMFF037C13+           TAAATATACTACATCCAATTTATGGTAAGTACAAAATTAAGG-GAAATTGAGAAGTACCC
JMSF032P07+           TAAATATACTACATCCAATTTATGGTAAGTACAAAATTAAGG-GAAATTGAGAAGTACCC
JMSF006N12+           TAAATATACTACATCCAATTTATGGTAAGTACAAAATTAAGG-GAAATTGAGAAGTACCC
                      ____________________________________________________________
consensus             TAAATATACTACATCCAATTTATGGTAAGTACAAAATTAAGG-GAAATTGAGAAGTACCC
 
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JMFF050B02+           AAAAACAGAAATATCCCAAAATTCAAGCCTATGAATTTTCACATGCCCAAACTCATACCC
JMFF037C13+           AAAAACAGAAATATCCCAAAATTCAAGCCTATGAATTTTCACATGCCCAAACTCATACCC
JMSF032P07+           AAAAACAGAAATATCCCAAAATTCAAGCCTATGAATTTTCACATGCCCAAACTCATACCC
JMSF006N12+           AAAAACAGAAATATCCCAAAATTCAAGCCTATGAATTTTCACATGCCCAAACTCATACCC
                      ____________________________________________________________
consensus             AAAAACAGAAATATCCCAAAATTCAAGCCTATGAATTTTCACATGCCCAAACTCATACCC
 
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JMFF050B02+           AGTTCCCAGAAATTCC                                            
JMFF037C13+           AGTTCCCAGAAATTCC                                            
JMSF032P07+           AGTTCCCAGAAATTCCAAGAAAACATCAAAGTAAGCGAAAGAAAAAGGCTTTTTGGGCTT
JMSF006N12+           AGTTCCCAGAAATTCCAAGAAAACATCAAAGTAAGCGAAAGAAAAAGGCTTTTTGGGCTT
                      ____________________________________________________________
consensus             AGTTCCCAGAAATTCCAAGAAAACATCAAAGTAAGCGAAAGAAAAAGGCTTTTTGGGCTT
 
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JMSF032P07+           ATAGAGGAAGAAAAATGAAAGAGAGGCAGCAGAAGAGAAGTAATTATTTATACACTAATC
JMSF006N12+           ATAGAGGAAGAAAAATGAAAGAGAGGCAGCAGAAGAGAAGTAATTATTTATACACTAATC
                      ____________________________________________________________
consensus             ATAGAGGAAGAAAAATGAAAGAGAGGCAGCAGAAGAGAAGTAATTATTTATACACTAATC