Contig 011906:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS097C05Sequence627011906 (2)ref|XP_009782434.1|2e-60PREDICTED: putative U-box domain-containing protein 50 isoform X1 [Nicotiana sy
JMSF006D01Sequence373011906 (2)ref|XP_011099977.1|1e-20PREDICTED: putative U-box domain-containing protein 50 [Sesamum indicum]

Alignment

This contig is upended


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JMFS097C05+                                                                  TGAAG
                      ____________________________________________________________
consensus                                                                    TGAAG
 
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JMFS097C05+           AAGAAGAAGGTGAATCACAAGACCTTTTCTCTTTATCTGCAATTTCTGGGAGCATTATTC
                      ____________________________________________________________
consensus             AAGAAGAAGGTGAATCACAAGACCTTTTCTCTTTATCTGCAATTTCTGGGAGCATTATTC
 
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JMFS097C05+           TTTCTAACAGAACTTTAAAACCATGCTTCTTCTTTTTCTTTTCTCTAGCCCTTCCAATCA
                      ____________________________________________________________
consensus             TTTCTAACAGAACTTTAAAACCATGCTTCTTCTTTTTCTTTTCTCTAGCCCTTCCAATCA
 
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JMFS097C05+           CCCCTCCTACCTCATCCTTTATCACACTTTCACCATTCTCTTCTATTAGGAAAACCAGTT
                      ____________________________________________________________
consensus             CCCCTCCTACCTCATCCTTTATCACACTTTCACCATTCTCTTCTATTAGGAAAACCAGTT
 
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JMFS097C05+           TCCCTCCAAACACTACAAATAACTCACAGAAATCCGGTTTCTGGTTATGAATGTGAAACA
                      ____________________________________________________________
consensus             TCCCTCCAAACACTACAAATAACTCACAGAAATCCGGTTTCTGGTTATGAATGTGAAACA
 
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JMFS097C05+           ATCCCCTTAATGCACTTCTGGATTTCCATAATAAAGGTTTCATGAATGTTAAGGACAATA
                      ____________________________________________________________
consensus             ATCCCCTTAATGCACTTCTGGATTTCCATAATAAAGGTTTCATGAATGTTAAGGACAATA
 
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JMFS097C05+           CTAGTTTTGTTATCTGGAGACTAGAGATCAAATCCACCATGATCTTTTCAATGGATCCAT
                      ____________________________________________________________
consensus             CTAGTTTTGTTATCTGGAGACTAGAGATCAAATCCACCATGATCTTTTCAATGGATCCAT
 
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JMFS097C05+           CATGTCTCTGGATCTTTAGAATTTCAGCTTTAACCTTGCCACAAAAAGCTATGTAATTGG
JMSF006D01+                                                          GCTATGTAATTGG
                      ____________________________________________________________
consensus             CATGTCTCTGGATCTTTAGAATTTCAGCTTTAACCTTGCCACAAAAAGCTATGTAATTGG
 
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JMFS097C05+           CTAGAATCTTATCAGTTTTTGCTTCCTCATACTTGTCAAGATCTTTCAATTTCTCCTCAT
JMSF006D01+           CTAGAATCTTATCAGTTTTTGCTTCCTCATACTNGTCAAGATCTTTCAATTTCTCCTCAT
                      ____________________________________________________________
consensus             CTAGAATCTTATCAGTTTTTGCTTCCTCATACTTGTCAAGATCTTTCAATTTCTCCTCAT
 
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JMFS097C05+           TGACAGAGCTAGAAGGCAGTCTCCCAATTGGAGTATACACATAATCTCTGCAAATAGTAT
JMSF006D01+           TGACAGAGCTAGAAGGCAGTCTCCCAATTGGAGTATACACATAATCTCTGCAAATAGTAT
                      ____________________________________________________________
consensus             TGACAGAGCTAGAAGGCAGTCTCCCAATTGGAGTATACACATAATCTCTGCAAATAGTAT
 
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JMFS097C05+           TAGCAGCATAGAGAATGAGTATGGTGGTTGATTGGGAGGAGCAGTTTCTGAGCACCCACT
JMSF006D01+           TAGCAGCATAGAGAATGAGTATGGTGGTTGATTGGGAGGAGCAGTTTCTGAGCACCCACT
                      ____________________________________________________________
consensus             TAGCAGCATAGAGAATGAGTATGGTGGTTGATTGGGAGGAGCAGTTTCTGAGCACCCACT
 
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JMFS097C05+           CTAAGCTCTGAAAACCATCATG                                      
JMSF006D01+           NTAAGCTCTGAAAACCATCATGCACATCTTCCCCAATGCCCACATAAACTCTCTCTTCTT
                      ____________________________________________________________
consensus             CTAAGCTCTGAAAACCATCATGCACATCTTCCCCAATGCCCACATAAACTCTCTCTTCTT
 
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JMSF006D01+           TCTGACTCTCCTCCATACACTGTCTCTTTCCTCAAGCTGGGCTTCAGCAATGATGGAGAA
                      ____________________________________________________________
consensus             TCTGACTCTCCTCCATACACTGTCTCTTTCCTCAAGCTGGGCTTCAGCAATGATGGAGAA
 
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JMSF006D01+           GGGAAAACCATAAATGTTCTTGAAACAGCATGTGATTGCTGTACACAAAAAAAAACAATC
                      ____________________________________________________________
consensus             GGGAAAACCATAAATGTTCTTGAAACAGCATGTGATTGCTGTACACAAAAAAAAACAATC