Contig 011903:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A23Sequence491011903 (4)gb|KDP36577.1|2e-58hypothetical protein JCGZ_08344 [Jatropha curcas]790013652 (2)ref|XP_011101211.1|1e-62PREDICTED: protein S-acyltransferase 8 [Sesamum indicum]
JMFF033A18Sequence522011903 (4)gb|KDP36577.1|4e-68hypothetical protein JCGZ_08344 [Jatropha curcas]668013652 (2)ref|XP_011101211.1|4e-45PREDICTED: protein S-acyltransferase 8 [Sesamum indicum]
JMSF006A12Sequence215011903 (4)381001810 (12)emb|CDP21807.1|2e-34unnamed protein product, partial [Coffea canephora]
JMSF022D05Sequence656011903 (4)gb|KDP36577.1|2e-90hypothetical protein JCGZ_08344 [Jatropha curcas]

Alignment

This contig is upended


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JMSF022D05+                                                                    AGA
                      ____________________________________________________________
consensus                                                                      AGA
 
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JMSF022D05+           TGGAGCAGTGAGAGCAGCGAGGAGGCCGATAGAGCATGCAGGTATCACAGTATTTTACCT
                      ____________________________________________________________
consensus             TGGAGCAGTGAGAGCAGCGAGGAGGCCGATAGAGCATGCAGGTATCACAGTATTTTACCT
 
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JMFF033A18+                                            TTCGAGGGAATTGAAGGCTTGGAGTTT
JMSF022D05+           TGACAGTCATTCCATTAACAATTACATCCTTTATTCGAGGGAATTGAAGGCTTGGAGTTT
                      ____________________________________________________________
consensus             TGACAGTCATTCCATTAACAATTACATCCTTTATTCGAGGGAATTGAAGGCTTGGAGTTT
 
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JMFF033A18+           GCCTTCCACCGATCTCTGCTGATGCTGAGGTGTCATAGCGAAGCTCTTCCTCAGGTGGAT
JMFF012A23+                   CCGATCTCTGCTGATGCTGAGGTGTCATAGCGAAGCTCTTCCTCAGGTGGAT
JMSF022D05+           GCCTTCCACCGATCTCTGCTGATGCTGAGGTGTCATAGCGAAGCTCTTCCTCAGGTGGAT
                      ____________________________________________________________
consensus             GCCTTCCACCGATCTCTGCTGATGCTGAGGTGTCATAGCGAAGCTCTTCCTCAGGTGGAT
 
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JMFF033A18+           GCGAATTGCGTGGAACAATGCCAGGATCCCGAGCTGATGTAAGCAGAAGTAGAGCCAATA
JMFF012A23+           GCGAATTGCGTGGAACAATGCCAGGATCCCGAGCTGATGTAAGCAGAAGTAGAGCCAATA
JMSF022D05+           GCGAATTGCGTGGAACAATGCCAGGATCCCGAGCTGATGTAAGCAGAAGTAGAGCCAATA
                      ____________________________________________________________
consensus             GCGAATTGCGTGGAACAATGCCAGGATCCCGAGCTGATGTAAGCAGAAGTAGAGCCAATA
 
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JMFF033A18+           CATGAATGGTAAAGGCAATTGCTACCCCCAAAATTGCATATCCAGCGTTATGTGGTGAAA
JMFF012A23+           CATGAATGGTAAAGGCAATTGCTACCCCCAAAATTGCATATCCAGCGTTATGTGGTGAAA
JMSF022D05+           CATGAATGGTAAAGGCAATTGCTACCCCCAAAATTGCATATCCAGCGTTATGTGGTGAAA
                      ____________________________________________________________
consensus             CATGAATGGTAAAGGCAATTGCTACCCCCAAAATTGCATATCCAGCGTTATGTGGTGAAA
 
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JMFF033A18+           ACTGATGGCGAAGATGTCTTGCAACAAAGACACAAAAAATAATGGCAGGTACCGTGATTA
JMFF012A23+           ACTGATGGCGAAGATGTCTTGCAACAAAGACACAAAAAATAATGACAGGTACCGTGATTA
JMSF022D05+           ACTGATGGCGAAGATGTCTTGCAACAAAGACACAAAAAATAATGACAGGTACCGTGATTA
                      ____________________________________________________________
consensus             ACTGATGGCGAAGATGTCTTGCAACAAAGACACAAAAAATAATGACAGGTACCGTGATTA
 
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JMFF033A18+           AGAGAAAAGATACAAGCAACGACCTCGCATCAGGCCCAAATATCAACCTTCCACCAAGAA
JMFF012A23+           AGAGAAAAGATACAAGCAACGACCTCGCATCAGGCCCAAATATCAACCTTCCACCAAGAA
JMSF022D05+           AGAGAAAAGATACAAGCAACGACCTCGCATCAGGCCCAAATATCAACCTTCCACCAAGAA
                      ____________________________________________________________
consensus             AGAGAAAAGATACAAGCAACGACCTCGCATCAGGCCCAAATATCAACCTTCCACCAAGAA
 
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JMFF033A18+           AGAACTTATTGCTCCCTTTCCAGACTTCGAAGACGCGCTTTGCCATGAGCACGCCACAGC
JMFF012A23+           AGAACTTATTGCTCCCTTTCCAGACTTCGAAGACGCGCTTTGCCATGAGCACGCCACAGC
JMSF022D05+           AGAACTTATTGCTCCCTTTCCAGACTTCGAAGACGCGCTTTGCCATGAGCACGCCACAGC
JMSF006A12+                                       GAAGACGCGCTTTGCCATGAGCACGCCACAGC
                      ____________________________________________________________
consensus             AGAACTTATTGCTCCCTTTCCAGACTTCGAAGACGCGCTTTGCCATGAGCACGCCACAGC
 
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JMFF033A18+           TTCAAGCGTCCCCTCCTTTCTTTCTCTCTGTCTCTCTCAAGTCAACCCGGAA---AGTTG
JMFF012A23+           TTCAAGCGTCCCCTCCTTTCTTTCTCTCTGTCTCTCTCAAGTCAACCCGGAAAGCAGTTG
JMSF022D05+           TTCAAGCGTCCCCTCCTTTCTTTCTCTCTGTCTCTCTCAAGTCAACCCGGAAAGCAGTTG
JMSF006A12+           TTCAAGCGTCCCCTCCTTTCTTTCTCTCTGTCTCTCTCAAGTCAACCCGGAAAGCAGTTG
                      ____________________________________________________________
consensus             TTCAAGCGTCCCCTCCTTTCTTTCTCTCTGTCTCTCTCAAGTCAACCCGGAAAGCAGTTG
 
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JMFF033A18+           AACGACTTGAAGCTTGAAACTATCCATCTCCCTTCTTCTTCTTCTTCTTCAGCTCAATCC
JMFF012A23+           AACGACTTGAAGCTTGAAACTATCCATCTCCCTTCTTCTTCTTCTTCTTCAGCTCAATCC
JMSF022D05+           AACGACTTGAAGCTTGAAACTATCCATCTCCCTTCTTCTTCTTCTTCTTCAGCTCAATCC
JMSF006A12+           AACGACTTGAAGCTTGAAACTATCCATCTCCCTTCTTCTTCTTCTTCTTCAGCTCAATCC
                      ____________________________________________________________
consensus             AACGACTTGAAGCTTGAAACTATCCATCTCCCTTCTTCTTCTTCTTCTTCAGCTCAATCC
 
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JMFF033A18+           CTCGTCGACCCAGACGC                                           
JMFF012A23+           CTCGTCGACCCAGACGCGC                                         
JMSF022D05+           CTCGTCGACCCAGACGCGCAGACACGGAGAGGGAACGAATCTCAGTATATT         
JMSF006A12+           CTCGTCGACCCAGACGCGCAGACACGGAGAGGGAACGAATCTCAGTATATTCAGCAGTCC
                      ____________________________________________________________
consensus             CTCGTCGACCCAGACGCGCAGACACGGAGAGGGAACGAATCTCAGTATATTCAGCAGTCC