Contig 011896:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005H17Sequence432011896 (2)ref|XP_004238422.1|3e-21PREDICTED: mast cell carboxypeptidase A [Solanum lycopersicum]377001354 (4)emb|CDO98696.1|1e-17unnamed protein product [Coffea canephora]
JMSF030H11Sequence658011896 (2)ref|XP_004238422.1|1e-72PREDICTED: mast cell carboxypeptidase A [Solanum lycopersicum]778006773 (3)ref|XP_004238422.1|4e-81PREDICTED: mast cell carboxypeptidase A [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF030H11+                                                           TTCACAAAGCTC
                      ____________________________________________________________
consensus                                                             TTCACAAAGCTC
 
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JMSF030H11+           CCCNTCCTCTACAAGTTTGCGCCCATTCACATTTTCCATTGGAACAATCTTAATAACAAG
                      ____________________________________________________________
consensus             CCCNTCCTCTACAAGTTTGCGCCCATTCACATTTTCCATTGGAACAATCTTAATAACAAG
 
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JMSF030H11+           TTTGTCCAAAGTATTATTAAGTGTAAGTGGGTATTGCTTTGGTAAGAATTCTTCATCGCT
                      ____________________________________________________________
consensus             TTTGTCCAAAGTATTATTAAGTGTAAGTGGGTATTGCTTTGGTAAGAATTCTTCATCGCT
 
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JMSF030H11+           TAAAATAGAAAGAATCCGTAATGCAAGCTCGGTTGTTATGAGCTCCCTCCCATGCTGCCC
                      ____________________________________________________________
consensus             TAAAATAGAAAGAATCCGTAATGCAAGCTCGGTTGTTATGAGCTCCCTCCCATGCTGCCC
 
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JMSF030H11+           AAAAGTAAGGAGGATTCTAACTTTTGATCTATCATCGCAGTCTTTCCCACCTTGGCAATA
                      ____________________________________________________________
consensus             AAAAGTAAGGAGGATTCTAACTTTTGATCTATCATCGCAGTCTTTCCCACCTTGGCAATA
 
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JMSF030H11+           TGTAACTATAGTTGTATCAGCATGATACCCTCTATTCTTAGTAGAAAGGGTTTCAATAAA
JMSF005H17+                                                                    AAA
                      ____________________________________________________________
consensus             TGTAACTATAGTTGTATCAGCATGATACCCTCTATTCTTAGTAGAAAGGGTTTCAATAAA
 
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JMSF030H11+           GAGTTTGTCTGGGTGTCGATGCACCAACGACTCAATTTCTTCCAGCAAAGCCCCACTGGT
JMSF005H17+           GAGTTTGTCTGGGTGTCGATGCACCAACGACTCAATTTCTTCCAGCAAAGCCCCACTGGT
                      ____________________________________________________________
consensus             GAGTTTGTCTGGGTGTCGATGCACCAACGACTCAATTTCTTCCAGCAAAGCCCCACTGGT
 
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JMSF030H11+           ATGATAAAGATCGCGATTGATGGGCGTCACAGAAGCTTGGCCCTTGGTGGCATTACTTTT
JMSF005H17+           ATGATAAAGATCGCGATTGATGGGCGTCACAGAAGCTTGGCCCTTGGTGGCATTACTTTT
                      ____________________________________________________________
consensus             ATGATAAAGATCGCGATTGATGGGCGTCACAGAAGCTTGGCCCTTGGTGGCATTACTTTT
 
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JMSF030H11+           GGCATTGACATTAGAAAAATAAGCAAAGGATGATAATAGGAAGAGAAGAGACAAAAAGGA
JMSF005H17+           GGCATTGACATTAGAAAAATAAGCAAAGGATGATAATAGGAAGAGAAGAGACAAAAAGGA
                      ____________________________________________________________
consensus             GGCATTGACATTAGAAAAATAAGCAAAGGATGATAATAGGAAGAGAAGAGACAAAAAGGA
 
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JMSF030H11+           GATCGACGGAGAGGAGAAGAGAGAATAGAGGCGGCGTTGGCGACGGCGGCCCATCTAAAT
JMSF005H17+           GATCGACGGAGAGGAGAAGAGAGAATAGAGGCGGCGTTGGCGACGGCGGCCCATCTAAAT
                      ____________________________________________________________
consensus             GATCGACGGAGAGGAGAAGAGAGAATAGAGGCGGCGTTGGCGACGGCGGCCCATCTAAAT
 
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JMSF030H11+           CTGGAGATTGGTGAAGGGAAAGGGAAGAAGAACAAGGACAGCAGCTGTCGTCAGCGTGCT
JMSF005H17+           CTGGAGATTGGTGAAGGGAAAGGGAAGAAGAACAAGGACAGCAGCTGTCGTCAGCGTGCT
                      ____________________________________________________________
consensus             CTGGAGATTGGTGAAGGGAAAGGGAAGAAGAACAAGGACAGCAGCTGTCGTCAGCGTGCT
 
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JMSF030H11+           CATTTGAATCAACAGTACAATGTCGTGTCGGGACTCGCAAAATT                
JMSF005H17+           CATTTGAATCAACAGTACAATGTCGTGTCGGGACTCGCAAAATTTGAAACAGCAAATGCC
                      ____________________________________________________________
consensus             CATTTGAATCAACAGTACAATGTCGTGTCGGGACTCGCAAAATTTGAAACAGCAAATGCC