Contig 011893:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023D15+                                                            ATAACATTNGG
                      ____________________________________________________________
consensus                                                              ATAACATTNGG
 
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JMSF023D15+           TTGTTTTACCNNTAAAAATTCTGTACAGTCCTTACAAACAGAATTCTGCTTAAAGACATG
                      ____________________________________________________________
consensus             TTGTTTTACCNNTAAAAATTCTGTACAGTCCTTACAAACAGAATTCTGCTTAAAGACATG
 
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JMSF023D15+           CGGAAGATTACTTCATCAACAGTTATTGGTGGAAAAAGAAAAATCAGCACTAAACATTTT
                      ____________________________________________________________
consensus             CGGAAGATTACTTCATCAACAGTTATTGGTGGAAAAAGAAAAATCAGCACTAAACATTTT
 
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JMSF023D15+           TTAAGCTACCTATTTCTATGGATCTTCATGAGCATGTTCAAACTGAAAATCAATTGCTAG
JMSF048C02+                                   TTCATGAGCATGTTCAAACTGAAAATCAATTGCTAG
                      ____________________________________________________________
consensus             TTAAGCTACCTATTTCTATGGATCTTCATGAGCATGTTCAAACTGAAAATCAATTGCTAG
 
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JMSF023D15+           ATTGCTACCTTTATGCCTCAGGAATTAGTCTGGAATAATGTAAAAAAAGTAAGATAAAAA
JMSF048C02+           ATTGCTACCTTTATGCCTCAGGAATTAGTTTGGAATAATGTAAAAAAAGTAAGATAAAAA
                      ____________________________________________________________
consensus             ATTGCTACCTTTATGCCTCAGGAATTAGTTTGGAATAATGTAAAAAAAGTAAGATAAAAA
 
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JMSF023D15+           ATAACCTAAAATCAAAACTTAGCTATTTTGCCCCTTTGTATGGTGATTTGTCCTTTCGAT
JMSF048C02+           AAGACCTAAAATTAAAACTCAGCTATTTTGCCCCTTTGTATGGTGATTTGTCCTTTCGAT
                      ____________________________________________________________
consensus             ATGACCTAAAATTAAAACTTAGCTATTTTGCCCCTTTGTATGGTGATTTGTCCTTTCGAT
 
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JMSF023D15+           ATGTATATGAAGATTTCAATCAGAAGTCTAAAAAAATGTAAATCACACAAACAATAATAA
JMSF048C02+           ATGTATATGAAGATTTCAATCAGAAGTCTAAAATAATGTAAACCACACAAACAATAATAA
                      ____________________________________________________________
consensus             ATGTATATGAAGATTTCAATCAGAAGTCTAAAATAATGTAAATCACACAAACAATAATAA
 
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JMSF023D15+           ATGAGTAAAATTAAACATTTGAATTTCACAAATTAACACAGATTTATACACATTAGATAC
JMSF048C02+           ATGAGTAAAATTAAACATTTGAATTTCACAAATTAACACAGATTTATACACATTAGATAC
                      ____________________________________________________________
consensus             ATGAGTAAAATTAAACATTTGAATTTCACAAATTAACACAGATTTATACACATTAGATAC
 
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JMSF023D15+           CTGGCAAAAAAATAACTTATCTGGTAGATTTCATTCGATGTTTGAGTTGCTCTTTTTAGT
JMSF010G01+                               CTGGTAGATTTCATTCGATGTTTGAGTTGCTCTTCTTAGT
JMSF048C02+           CTGGCAAAAAAATAACTTATCTGGTAGATTTCATTCGATGTTTGAGTTGCTCTTCTTAGT
                      ____________________________________________________________
consensus             CTGGCAAAAAAATAACTTATCTGGTAGATTTCATTCGATGTTTGAGTTGCTCTTCTTAGT
 
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JMSF023D15+           TCGAACAGGTGATTTAAAGCAACAGAGATCCTTCCGTTTCGATTCGTACTCGGGTTTCCA
JMSF010G01+           TCGAACAGGTGATTTAAAGCAACAGAGATCCTTCCGTTTCGATTCGTACTCGGGTTTCCA
JMSF048C02+           TCGAACAGGTGATTTAAAGCAACAGAGATCCTTCCGTTTCGATTCGTACTCGGGTTTCCA
JMSF009P02+                                                                 TTTCCA
JMSF005C20+                                                      TCGTACTCGGGTTTCCA
                      ____________________________________________________________
consensus             TCGAACAGGTGATTTAAAGCAACAGAGATCCTTCCGTTTCGATTCGTACTCGGGTTTCCA
 
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JMSF023D15+           GAATATTGCCGAACAGAAAAATCGAGGAATGAAACAAATTGCGACCGATCTAAAACTACA
JMSF010G01+           GAATATTGCCGAACAGAACAATCGAGGAATGAAACAAATTGCGACCGATCTAAAACTACA
JMSF048C02+           GAATATTGCCGAACAGAACAATCGAGGAATGAAACAAATTGCGACCGATCTAAAACTACA
JMSF009P02+           GAATATTGCCGAACAGAACAATCGAGGANTGAAACAAATTGCGACCGATCTAAAACTACA
JMSF005C20+           GAATATTGCCGAACAGAACAATCGAGGAATGAAACAAATTGCGACCGATCTAAAACTACA
                      ____________________________________________________________
consensus             GAATATTGCCGAACAGAACAATCGAGGAATGAAACAAATTGCGACCGATCTAAAACTACA
 
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JMSF023D15+           CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGAG
JMSF010G01+           CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGCG
JMSF048C02+           CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGCG
JMSF009P02+           CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGCG
JMSF005C20+           CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGCG
                      ____________________________________________________________
consensus             CTTTCAGATCGAGGAGTACTGCAAGGAGAAATGAAGAACCAATCACACAGTACGAAAGCG
 
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JMSF023D15+           AGGACGATCCGACTGAGATTGGCGAGAACCAGCC                          
JMSF010G01+           AGGACGATCCGACTGAGATTGGCGAGAACCAGCCTTCTATATGATGAAGCTCATTCAGAA
JMSF048C02+           AGGACGATCCGACTGAGATTGGCGAGAACCAGCCTTCTATATGATGAAGCTCATTCAGAA
JMSF009P02+           AGGACGATCCGACTGAGATTGGCGAGAACCAGCCTTCTATATGATGAAGCTCATTCAGAA
JMSF005C20+           AGGACGATCCGACTGAGATTGGCGAGAACCAGCCTTCTATATGATGAAGCTCATTCAGAA
                      ____________________________________________________________
consensus             AGGACGATCCGACTGAGATTGGCGAGAACCAGCCTTCTATATGATGAAGCTCATTCAGAA
 
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JMSF010G01+           CTATATGATTAATGTTGTTTTCAACAGATGGTAGCCAGACTCAGCCGGATGTAGAGAAGA
JMSF048C02+           CTATATGATTAATGTTGTTTTCAACAGATGGTAGCCAGACTCAGCCGGATGTAGAGAAGA
JMSF009P02+           CTATATGATTAATGTTGTTTTCAACAGATGGTAGCCAGACTCAGCCGGATGTAGAGAAGA
JMSF005C20+           CTATATGATTAATGTTGTTTTCAACAGATGGTAGCCAGACTCAGCCGGATGTAGAGAAGA
                      ____________________________________________________________
consensus             CTATATGATTAATGTTGTTTTCAACAGATGGTAGCCAGACTCAGCCGGATGTAGAGAAGA
 
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JMSF010G01+           CGAAAGAGACAGAGAAGAGAAGATAGAGACAAGAAGCAATTTAGATCTGCCGAGTCTTTC
JMSF048C02+           CGAAAGAGACAGAGAAGAGAAGATAGAGACAAGAAGCAATTTAGATCTGCCGAGTCTTTC
JMSF009P02+           CGAAAGAGACAGAGAAGAGAAGATAGAGACAAGAAGCAATTTAGATCTGCCGAGTCTTTC
JMSF005C20+           CGAAAGAGACAGAGAAGAGAAGATAGAGACAAGAAGCAATTTAGATCTGCCGAGTCTTTC
                      ____________________________________________________________
consensus             CGAAAGAGACAGAGAAGAGAAGATAGAGACAAGAAGCAATTTAGATCTGCCGAGTCTTTC
 
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JMSF010G01+           GTTCAAT                                                     
JMSF048C02+           GTTCAAT                                                     
JMSF009P02+           GTTCAAT                                                     
JMSF005C20+           GTTCAATGTACTAGAGATTCCCACCACACCCGCCTTTTTTATTTTCTTTTTCATCTCCCC
                      ____________________________________________________________
consensus             GTTCAATGTACTAGAGATTCCCACCACACCCGCCTTTTTTATTTTCTTTTTCATCTCCCC