| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022G17 | Sequence | 526 | 011892 (7) | ref|XP_006347706.1| | 2e-33 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1 [S | 769 | 004018 (3) | emb|CCW28845.1| | 3e-63 | DNA gyrase, partial [Arachis ipaensis] |
| JMFS150C01 | Sequence | 539 | 011892 (7) | ref|XP_006347708.1| | 3e-38 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X3 [S | |||||
| JMFS157A05 | Sequence | 608 | 011892 (7) | ref|XP_006347708.1| | 8e-66 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X3 [S | |||||
| JMSF003F15 | Sequence | 255 | 011892 (7) | ref|XP_004230064.1| | 8e-05 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 [Solanu | |||||
| JMSF004K07 | Sequence | 367 | 011892 (7) | ref|XP_006347708.1| | 3e-07 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X3 [S | |||||
| JMSF005B21 | Sequence | 298 | 011892 (7) | ref|XP_006347708.1| | 2e-07 | PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X3 [S | 428 | 014949 | ref|XP_011042076.1| | 3e-15 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein |
| JMSF031G24 | Sequence | 133 | 011892 (7) | emb|CBI29134.3| | 3e-15 | unnamed protein product [Vitis vinifera] | 655 | 004018 (3) | emb|CCW28845.1| | 5e-54 | DNA gyrase, partial [Arachis ipaensis] |
This contig is upended
. : . : . : . : . : . :
JMFS157A05+ TCCTTGAATAAGTGGAAAGCGCAAGGAAAAAT
____________________________________________________________
consensus TCCTTGAATAAGTGGAAAGCGCAAGGAAAAAT
. : . : . : . : . : . :
JMSF031G24+ C
JMFS157A05+ CCTGTGCCATTCTCACCAAGGAATCATAAACAGCATTATCTCCATGTGGATGGAACTTGC
____________________________________________________________
consensus CCTGTGCCATTCTCACCAAGGAATCATAAACAGCATTATCTCCATGTGGATGGAACTTGC
. : . : . : . : . : . :
JMSF031G24+ CAAGAACCTNTCCAACAANTNTTGCACATTTNTNGTANGGNTTNTTNGAAGAAAGACCAA
JMFS157A05+ CAAGAACCTCTCCAACAACTCTTGCACATTTCTTGTATGGCTTCTTTGAAGAAAGACCAA
JMFF022G17+ AAGAAAGACCAA
JMFS150C01+ AAGAAAGACCAA
____________________________________________________________
consensus CAAGAACCTCTCCAACAACTCTTGCACATTTCTTGTATGGCTTCTTTGAAGAAAGACCAA
. : . : . : . : . : . :
JMSF031G24+ GTTCATGCATTGCAAACAGTATCCGCCGGTGCACCGGTTTCAACCCGTCACGAACATCAG
JMFS157A05+ GTTCATGCATTGCAAACAGTATCCGCCGGTGCACCGGTTTCAACCCGTCACGAACATCAG
JMFF022G17+ GTTCATGCATTGCAAACAGTATCCGCCGGTGCACCGGTTTCAACCCGTCACGAACATCAG
JMFS150C01+ GTTCATGCATTGCAAACAGTATCGGCCGGTGCACCGGTTTCAACCCGTCACGAACATCAG
____________________________________________________________
consensus GTTCATGCATTGCAAACAGTATCCGCCGGTGCACCGGTTTCAACCCGTCACGAACATCAG
. : . : . : . : . : . :
JMSF031G24+ GCAGC
JMFS157A05+ GCAGCGCTCGCCCGAGTAGCACTGACATGGCATACGACATGTACGCATCGGTGGCCTCCT
JMFF022G17+ GCAGCGCTCGCCCGAGTAGCACTGACATGGCATACGACATGTACGCATCGGTGGCCTCCT
JMFS150C01+ GCAGCGCTCGCCCGAGTAGCACTGACATGGCATACGACATGTACGCATCGGTGGCCTCCT
____________________________________________________________
consensus GCAGCGCTCGCCCGAGTAGCACTGACATGGCATACGACATGTACGCATCGGTGGCCTCCT
. : . : . : . : . : . :
JMFS157A05+ TGTGGAGCTCAGTAGCGACAATCCTACCCTCGCCTCCACCACTCCCAATGCCACCACCAT
JMSF003F15+ TCCACCACTCCCAATGCCACCACCAT
JMFF022G17+ TGTGGAGCTCAGTAGCGACAATCCTACCCTCGCCTCCACCACTCCCAATGCCACCACCAT
JMFS150C01+ TGTGGAGCTCAGTAGCGACAATCCTACCCTCGCCTCCACCACTCCCAATGCCACCACCAT
JMSF004K07+ ATGCCACCACCAT
____________________________________________________________
consensus TGTGGAGCTCAGTAGCGACAATCCTACCCTCGCCTCCACCACTCCCAATGCCACCACCAT
. : . : . : . : . : . :
JMFS157A05+ CACTCACAATGACGCTTCCG-TTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
JMSF003F15+ CACTCACAATGACGCTTCCG-TTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
JMFF022G17+ CACTCACAATGACGCTTCCG-TTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
JMFS150C01+ CACTCACAATGACGCTTCCG-TTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
JMSF004K07+ CACTCACAATGACGCTTCCGTTTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
____________________________________________________________
consensus CACTCACAATGACGCTTCCG-TTCACTGTATCCCCACCATCCGCCGCCTCAACTTCCCCC
. : . : . : . : . : . :
JMFS157A05+ CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
JMSF003F15+ CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
JMFF022G17+ CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
JMFS150C01+ CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
JMSF004K07+ CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
JMSF005B21+ CGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
____________________________________________________________
consensus CGCGTAGCACTCACTGGGCGCACACGTCTCCTCTGAGGAACCGCGGCGGAGAGGAACCGG
. : . : . : . : . : . :
JMFS157A05+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
JMSF003F15+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
JMFF022G17+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
JMFS150C01+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
JMSF004K07+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
JMSF005B21+ AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
____________________________________________________________
consensus AGCTCCGACGCTCCTCTTCGGAGCCCCGGAAATGGAGGCACTCGAGCTGGGAGAGTGAGC
. : . : . : . : . : . :
JMFS157A05+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATAGT
JMSF003F15+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCAT
JMFF022G17+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATAGT
JMFS150C01+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATAGT
JMSF004K07+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATAGT
JMSF005B21+ CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATGGT
____________________________________________________________
consensus CGGTGGTGGTATCTGCATAATAACCGGAATCCGGTGGTGAAGGCCATCGGTTTAGATAGT
. : . : . : . : . : . :
JMFS157A05+ CGAAGTCCCGATGTAAGGTGAAAACTGTGAACATTCA
JMFF022G17+ CGAAGTCCAGATGTAAGGTGAAAACTGTGAACATTCATGCCATAGAACAGTATAGAGA
JMFS150C01+ CGAAGTCCAGATGTAAGGTGAAAACTGTGAACATTCATGCCATAGAACAGTATAGAGAAT
JMSF004K07+ CGAAGTCCAGATGTAAGGTGAAAACTGTGAACATTCATGCCATAGAACAGTATAGAGAAT
JMSF005B21+ CGAAGTCCAGATGTAAGGTGAAAACTGTGAACATTCATGCCATAGAACAGTATAGAGAAT
____________________________________________________________
consensus CGAAGTCCAGATGTAAGGTGAAAACTGTGAACATTCATGCCATAGAACAGTATAGAGAAT
. : . : . : . : . : . :
JMFS150C01+ AGAGATTGTGAGAGCAAATTG
JMSF004K07+ AGAGATTGTGAGAGCAAATTGCAGAGTTATCTGTGGCCTGTGAGTTTGTCTAC
JMSF005B21+ AGAGATTGTGAGAGCAAATTGCAGAGTTATCTGTGGCCTGTGAGTTTGTCTACGACTGTC
____________________________________________________________
consensus AGAGATTGTGAGAGCAAATTGCAGAGTTATCTGTGGCCTGTGAGTTTGTCTACGACTGTC