Contig 011891:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004P12Sequence254011891 (3)ref|XP_009587399.1|8e-04PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform
JMSF020C23Sequence649011891 (3)ref|XP_009587400.1|2e-103PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform736010089 (2)gb|AAA19157.1|4e-56biotin-containing subunit of methylcrotonyl-CoA carboxylase, partial [Solanum l
JMSF047M20Sequence653011891 (3)ref|XP_009587400.1|3e-105PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform714010089 (2)gb|AAA19157.1|4e-51biotin-containing subunit of methylcrotonyl-CoA carboxylase, partial [Solanum l

Alignment

This contig is upended


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JMSF047M20+                 TCCATGAGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
JMSF020C23+                       AGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
                      ____________________________________________________________
consensus                   TCCATGAGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
 
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JMSF047M20+           CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
JMSF020C23+           CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
                      ____________________________________________________________
consensus             CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
 
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JMSF047M20+           ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
JMSF020C23+           ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
                      ____________________________________________________________
consensus             ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
 
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JMSF047M20+           TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
JMSF020C23+           TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
                      ____________________________________________________________
consensus             TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
 
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JMSF047M20+           GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
JMSF020C23+           GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
                      ____________________________________________________________
consensus             GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
 
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JMSF047M20+           TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
JMSF020C23+           TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
                      ____________________________________________________________
consensus             TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
 
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JMSF047M20+           CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
JMSF020C23+           CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
                      ____________________________________________________________
consensus             CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
 
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JMSF047M20+           TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
JMSF020C23+           TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
JMSF004P12+                                                         TTAGCTATAAGTAT
                      ____________________________________________________________
consensus             TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
 
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JMSF047M20+           TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
JMSF020C23+           TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
JMSF004P12+           TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
                      ____________________________________________________________
consensus             TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
 
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JMSF047M20+           TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
JMSF020C23+           TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
JMSF004P12+           TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
                      ____________________________________________________________
consensus             TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
 
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JMSF047M20+           GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCAT    
JMSF020C23+           GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCAT    
JMSF004P12+           GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCATCCGG
                      ____________________________________________________________
consensus             GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCATCCGG
 
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JMSF004P12+           GTCAGGCTTTGGGAAAGGAATCAAATATAATAGGATGAGGAAGTAGAAATTATGACTTTC
                      ____________________________________________________________
consensus             GTCAGGCTTTGGGAAAGGAATCAAATATAATAGGATGAGGAAGTAGAAATTATGACTTTC