Contig 011891:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004P12Sequence254011891 (3)ref|XP_009587399.1|8e-04PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform
JMSF020C23Sequence649011891 (3)ref|XP_009587400.1|2e-103PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform736010089 (2)gb|AAA19157.1|4e-56biotin-containing subunit of methylcrotonyl-CoA carboxylase, partial [Solanum l
JMSF047M20Sequence653011891 (3)ref|XP_009587400.1|3e-105PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform714010089 (2)gb|AAA19157.1|4e-51biotin-containing subunit of methylcrotonyl-CoA carboxylase, partial [Solanum l

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047M20+ TCCATGAGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
JMSF020C23+ AGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
                      ____________________________________________________________
consensus TCCATGAGTCGGCTTGATTAAAATAGGATAGCCAATTTTCTCTGCTTCTGACCT
 
. : . : . : . : . : . :
JMSF047M20+ CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
JMSF020C23+ CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
                      ____________________________________________________________
consensus CATTAAGTCAACATCTTGTTCTTCACCGTGATATCCAGGTACAAGTGGCACCCCTGCTGC
 
. : . : . : . : . : . :
JMSF047M20+ ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
JMSF020C23+ ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
                      ____________________________________________________________
consensus ACCCATTATTCTCTTTGAAGCACTTTTGTCGCCCATATCACGGATTGCAGATGCAGGAGG
 
. : . : . : . : . : . :
JMSF047M20+ TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
JMSF020C23+ TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
                      ____________________________________________________________
consensus TCCAATAAAGATCAAACCTCCATCTTCACAGAGTTGAGCAAAATCAGCACTTTCCGATAA
 
. : . : . : . : . : . :
JMSF047M20+ GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
JMSF020C23+ GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
                      ____________________________________________________________
consensus GAAACCATAACCTGGGTGGATAGCCTGTGCTCCAGTCCGAGCTGCGGCTTCCACAATTGT
 
. : . : . : . : . : . :
JMSF047M20+ TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
JMSF020C23+ TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
                      ____________________________________________________________
consensus TGGAGCGTTCAAGTAGCTCAGACGCGCCGGCGGAGGACCAATACGAACTGCCTCGTCGGC
 
. : . : . : . : . : . :
JMSF047M20+ CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
JMSF020C23+ CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
                      ____________________________________________________________
consensus CGATTTTACGTGCAGACTGTACCTATCGGCGTCGCTGTAGACGGCGACAGTACGAATCCC
 
. : . : . : . : . : . :
JMSF047M20+ TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
JMSF020C23+ TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
JMSF004P12+ TTAGCTATAAGTAT
                      ____________________________________________________________
consensus TAGCCTTTTGGCGGTTCTAATGATTCTACAAGCTATTTCGCCTCTATTAGCTATAAGTAT
 
. : . : . : . : . : . :
JMSF047M20+ TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
JMSF020C23+ TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
JMSF004P12+ TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
                      ____________________________________________________________
consensus TTTTTCAATCTTTTGAGTAGCATTGTGGTCCTTCGTCGCCGGCGGCGCAGTAGAAAATAG
 
. : . : . : . : . : . :
JMSF047M20+ TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
JMSF020C23+ TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
JMSF004P12+ TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
                      ____________________________________________________________
consensus TGATCGCCGGCAAAGAACGTGCGGTTTCCGGTGGATTTCCCGCCGGAGTATAGAAGAAAT
 
. : . : . : . : . : . :
JMSF047M20+ GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCAT
JMSF020C23+ GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCAT
JMSF004P12+ GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCATCCGG
                      ____________________________________________________________
consensus GGTAGGCATTTAGAAGAAGCAAAGGTGCACTAATTGGAGTCTGAGGAAAATCTCATCCGG
 
. : . : . : . : . : . :
JMSF004P12+ GTCAGGCTTTGGGAAAGGAATCAAATATAATAGGATGAGGAAGTAGAAATTATGACTTTC
                      ____________________________________________________________
consensus GTCAGGCTTTGGGAAAGGAATCAAATATAATAGGATGAGGAAGTAGAAATTATGACTTTC