Contig 011888:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B21Sequence596011888 (14)gb|EYU41945.1|5e-112hypothetical protein MIMGU_mgv1a012043mg [Erythranthe guttata]757011888 (14)ref|XP_011084586.1|2e-116PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC
JMFF018D12Sequence595011888 (14)ref|XP_011084586.1|2e-113PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC789011888 (14)ref|XP_009597091.1|9e-111PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMFF027J08Sequence587011888 (14)ref|XP_011084586.1|2e-113PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC676011888 (14)ref|XP_009766580.1|3e-113PREDICTED: 40S ribosomal protein S4 [Nicotiana sylvestris]
JMFF050B05Sequence627011888 (14)ref|XP_011084586.1|5e-124PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC622011888 (14)ref|XP_009597091.1|1e-77PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMFS137C11Sequence569011888 (14)ref|XP_009595443.1|7e-55PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMFS149B08Sequence579011888 (14)ref|XP_006576177.1|3e-108PREDICTED: uncharacterized protein LOC100500000 isoform X2 [Glycine max]
JMSF004I14Sequence438011888 (14)ref|XP_010553233.1|8e-73PREDICTED: 40S ribosomal protein S4-3 isoform X2 [Tarenaya hassleriana]554011888 (14)ref|XP_009597091.1|9e-64PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMSF050B16Sequence680011888 (14)ref|XP_010553232.1|9e-132PREDICTED: 40S ribosomal protein S4-3 isoform X1 [Tarenaya hassleriana]807011888 (14)ref|XP_009766580.1|7e-122PREDICTED: 40S ribosomal protein S4 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS137C11+ GTTGATTCACTTGCATTCAACACCAAAATTAACAGCCG
rJMFF018D12- TTTGTTGATTCACTTGCATTCAACACCAAAATTAACAGCCG
                      ____________________________________________________________
consensus TTTGTTGATTCACTTGCATTCAACACCAAAATTAACAGCCG
 
. : . : . : . : . : . :
rJMFF050B05- TTGTAGTTCAAAACTGTATAAAATG
JMFS137C11+ ACATTCGATAAGTCCAGGCATACACAGCCAATAAGTTGTAGTTCAAAACTGTATAAAATG
rJMSF004I14- GCCAATAAGTTGTAGTTCAAAACTGTATAAAATG
rJMFF018D12- ACATTCGATAAGTCCAGGCATACACAGCCAATAAGTTGTAGTTCAAAACTGTATAAAATG
rJMFF010B21- GCCAATAAGTTGTAGTTCAAAACTGTATAAAATG
rJMSF050B16- TTGTAGTTCAAAACTGTATAAAATG
                      ____________________________________________________________
consensus ACATTCGATAAGTCCAGGCATACACAGCCAATAAGTTGTAGTTCAAAACTGTATAAAATG
 
. : . : . : . : . : . :
rJMFF050B05- TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
JMFS137C11+ TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
rJMSF004I14- TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
rJMFF018D12- TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
rJMFF010B21- TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
rJMFF027J08- AAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
rJMSF050B16- TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
                      ____________________________________________________________
consensus TCTATTGAAAACAAATATCCAGCAAAAATTCTAATGCAACAAAATGATAGCAACTCAGTG
 
. : . : . : . : . : . :
rJMFF050B05- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
JMFS137C11+ AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
rJMSF004I14- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
rJMFF018D12- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
rJMFF010B21- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
rJMFF027J08- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
rJMSF050B16- AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
                      ____________________________________________________________
consensus AATGAAAATTTAGAGGGTACATCCACTTGGGGCAGTTTGGAGCGAGGAAATTTATTATTC
 
. : . : . : . : . : . :
rJMFF050B05- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
JMFS137C11+ TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
rJMSF004I14- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
rJMFF018D12- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
rJMFF010B21- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
rJMFF027J08- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
rJMSF050B16- TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
                      ____________________________________________________________
consensus TTTTAGGCAGTAGTAGCGGATTGAGCAGCAAGTCTCTTCTTGGCCTCCTCAATGATGGTC
 
. : . : . : . : . : . :
rJMFF050B05- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
JMFS137C11+ AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
rJMSF004I14- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
rJMFF018D12- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
rJMFF010B21- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCAATGGCTTAGTACCTTTCCCGATTGTG
rJMFF027J08- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
rJMSF050B16- AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
                      ____________________________________________________________
consensus AGCTTAATACCTTTGCCCTTTGGTAGTGACACCCATGGCTTAGTACCTTTCCCGATTGTG
 
. : . : . : . : . : . :
rJMFF050B05- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
JMFS137C11+ TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
rJMSF004I14- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
rJMFF018D12- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
rJMFF010B21- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
rJMFF027J08- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
rJMSF050B16- TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
                      ____________________________________________________________
consensus TACACATTACCCAAACGAGTTGCAAACTCGTGACCAAGAGCATCCTGGATATGAACGGTC
 
. : . : . : . : . : . :
rJMFF050B05- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
JMFS137C11+ TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
rJMSF004I14- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
rJMFF018D12- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
rJMFF010B21- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
rJMFF027J08- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
rJMSF050B16- TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
JMSF050B16+ CCGACACGCCTTCTGTTCCTT
                      ____________________________________________________________
consensus TCGAAGCTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCGACACGCCCTCTGTTCCTT
 
. : . : . : . : . : . :
rJMFF050B05- CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
JMFS137C11+ CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
rJMSF004I14- CCCCCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
rJMFF018D12- CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
rJMFF010B21- CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
rJMFF027J08- CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
rJMSF050B16- CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
JMFF050B05+ GACGTTGCNTACATCAAACTTGATAAAATCAACTATCTTGTTT
JMFS149B08+ CATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
JMSF050B16+ CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
                      ____________________________________________________________
consensus CCACCAGTGACCATGACGACGTTGCCTACATCAAACTTGATAAAATCAACTATCTTGTTT
 
. : . : . : . : . : . :
rJMFF050B05- GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMFS137C11+ GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGA
rJMSF004I14- GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
rJMFF018D12- GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
rJMFF010B21- GATTCCAAGTCAAGCTTGATCGTGTCATTAACCTTAATGAGCGGATCAGGATAGCGAATA
rJMFF027J08- GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
rJMSF050B16- GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMFF050B05+ GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMFF018D12+ TTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMFF027J08+ ATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMFF010B21+ TCCAAGTCAAGCTTGATCGTGTCATTAACCTTAATGAGCGGATCAGGATAGCGAATA
JMFS149B08+ GATTNCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
JMSF050B16+ GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
                      ____________________________________________________________
consensus GATTCCAAGTCAAGCTTGATCGTGTCATTAGCCTTAATGAGCGGATCAGGATAGCGAATA
 
. : . : . : . : . : . :
rJMFF050B05- GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
rJMSF004I14- GTTCTCCCATCATAGGTGTTGATGT
rJMFF018D12- GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
rJMFF010B21- GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
rJMFF027J08- GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
rJMSF050B16- GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMFF050B05+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMFF018D12+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMFF027J08+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMFF010B21+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMFS149B08+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
JMSF050B16+ GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
                      ____________________________________________________________
consensus GTTCTCCCATCATAGGTGTTGATGTAAGGGATCCCTTTCTTCCCAAACTGAACTGATCGA
 
. : . : . : . : . : . :
rJMFF050B05- ACTTTACATAGCTTGAAC
rJMFF018D12- ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
rJMFF010B21- ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
rJMFF027J08- ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
rJMSF050B16- ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMFF050B05+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMFF018D12+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMFF027J08+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMFF010B21+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMFS149B08+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMSF050B16+ ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
JMSF004I14+ GTGAAGCCGAAATCTGCCC
                      ____________________________________________________________
consensus ACTTTACATAGCTTGAACTTAGACTCCTCGTCCCTGATTGAGTGAAGCCGAAATCTGCCC
 
. : . : . : . : . : . :
rJMFF018D12- TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
rJMFF010B21- TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
rJMFF027J08- TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
rJMSF050B16- TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMFF050B05+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMFF018D12+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMFF027J08+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMFF010B21+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMFS149B08+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMSF050B16+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
JMSF004I14+ TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
                      ____________________________________________________________
consensus TTGGTGTCATAGAGCAGACGGAAATTCTCATTCGTCTTGGGCATTGACACGACATCCATA
 
. : . : . : . : . : . :
rJMFF018D12- AAACCAGCAGGGTACGTCTTGTCAGTCC
rJMFF010B21- AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
rJMFF027J08- AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCA
rJMSF050B16- AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAAAACATGGCGTTGC
JMFF050B05+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMFF018D12+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMFF027J08+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMFF010B21+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMFS149B08+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMSF050B16+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
JMSF004I14+ AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
                      ____________________________________________________________
consensus AAACCAGCAGGGTACGTCTTGTCAGTCCGCACCTTTCCATCAACAAGAACATGGCGTTGC
 
. : . : . : . : . : . :
rJMFF010B21- ATC
rJMSF050B16- ATCAGGATAGAAATGACTTC
JMFF050B05+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMFF018D12+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMFF027J08+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMFF010B21+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMFS149B08+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMSF050B16+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
JMSF004I14+ ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
                      ____________________________________________________________
consensus ATCAGGATAGAAATGACTTCACGATATGTGAGAGCATATTTCAATCTATTACGTATAATC
 
. : . : . : . : . : . :
JMFF050B05+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
JMFF018D12+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
JMFF027J08+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
JMFF010B21+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
JMFS149B08+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTG-----
JMSF050B16+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
JMSF004I14+ AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
                      ____________________________________________________________
consensus AAAACCAAGGGTAAACACTCCCTTGATTTGTGGGGACCTGATGATGGCTTTGGTGCAAAA
 
. : . : . : . : . : . :
JMFF050B05+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMFF018D12+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMFF027J08+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMFF010B21+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMFS149B08+ ------CCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMSF050B16+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
JMSF004I14+ GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
                      ____________________________________________________________
consensus GCACCACCTAGCTTGTCCAACATCCAATGTTTTGGGGCATTGAGCCTCTTCATGTGTTTC
 
. : . : . : . : . : . :
JMFF050B05+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMFF018D12+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMFF027J08+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMFF010B21+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMFS149B08+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMSF050B16+ TTCAAACCCCGAGCCGTTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
JMSF004I14+ TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
                      ____________________________________________________________
consensus TTCAAACCCCGAGCCATTGTGTTGCTATATCAAAGTGCTGCTTAGCTCCTCCTTGCTCTC
 
. : . : . : . : . : . :
JMFF050B05+ CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGC
JMFF018D12+ CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGCAGACAAGGTAAAT
JMFF027J08+ CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGCAGAC
JMFF010B21+ CCTCTCTTCCACTCTCTATNCCCTGTGTGTGAGAGCGCGCGCCGCAGACAAGGCAAAT
JMFS149B08+ C
JMSF050B16+ CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGCAGACAAGGCAAAT
JMSF004I14+ CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGCAGACAAGGCAAATGC
                      ____________________________________________________________
consensus CCTCTCTTCCACTCTCTAT-CCCTGTGTGTGAGAGCGCGCGCCGCAGACAAGGCAAATGC