Contig 011883:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003O06-                                                       AATCAATTCCATTCC
                      ____________________________________________________________
consensus                                                          AATCAATTCCATTCC
 
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rJMSF003O06-          TTATAATAACATCCAACAAATATCATCAATCACCATATTATCCATTAAATCCTGTCTGGC
                      ____________________________________________________________
consensus             TTATAATAACATCCAACAAATATCATCAATCACCATATTATCCATTAAATCCTGTCTGGC
 
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rJMSF003O06-          TCCAAACAGCATCTCGTACTCGACTCATGTCTCGGCCCTTAAGCGTTCTACCTGCGCCCT
                      ____________________________________________________________
consensus             TCCAAACAGCATCTCGTACTCGACTCATGTCTCGGCCCTTAAGCGTTCTACCTGCGCCCT
 
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rJMSF003O06-          CGCACATTGAATTTGCGGATGTTCTTCCATACTCACGTGCCAAATATTCGTGTGGTGGGA
                      ____________________________________________________________
consensus             CGCACATTGAATTTGCGGATGTTCTTCCATACTCACGTGCCAAATATTCGTGTGGTGGGA
 
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rJMSF003O06-          CCATTTCAAAGTCGCGATTATGGGTATGAGAATCAGAATCATAAAAGGACTCAACCGAGT
                      ____________________________________________________________
consensus             CCATTTCAAAGTCGCGATTATGGGTATGAGAATCAGAATCATAAAAGGACTCAACCGAGT
 
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rJMSF003O06-          CAACTCGGTTGAAGTTTGACCAATTGGGAATGTTCACCGGGACTGAAGTGGAAAGATGTC
JMFN037C17+                    TGAAGTTTGACCAATTGGGAATGTTCACCGGGACTGAAGTGGAAAGATGTC
                      ____________________________________________________________
consensus             CAACTCGGTTGAAGTTTGACCAATTGGGAATGTTCACCGGGACTGAAGTGGAAAGATGTC
 
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rJMSF003O06-          GTACATTTGTCGGCGCCGCCGTTACGCCGTCATGTTGTCCGCGAAACTGATGAACGACCC
JMFN037C17+           GTACATTGTTCGGCGCCGCCGTTACGCCGTCATGTTGTCCGCGAAACTGATGAACGACCC
                      ____________________________________________________________
consensus             GTACATTTTTCGGCGCCGCCGTTACGCCGTCATGTTGTCCGCGAAACTGATGAACGACCC
 
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rJMSF003O06-          CAGACGGCGTCGTTTCACCTAAATCTTCAAAAGTCAAAGATGAGCCGTCATCGAGGCGGT
JMFN037C17+           CAGACGGCGTCGTTTCACCTAAATCTTCAAAAGTCAAAGATGAGCCGTCATCGAGGCGGT
                      ____________________________________________________________
consensus             CAGACGGCGTCGTTTCACCTAAATCTTCAAAAGTCAAAGATGAGCCGTCATCGAGGCGGT
 
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rJMSF003O06-          GATGCTCCGTACGTGGGACCCGCGGGCGGTGGCGGCGGCTCCTGAAATTATCAAAGCTTC
JMFN037C17+           GATGCTCCGTACGTGGGACCCGCGGGCGGTGGCGGCGGCTCCTGAAATTATCAAAGCTTC
                      ____________________________________________________________
consensus             GATGCTCCGTACGTGGGACCCGCGGGCGGTGGCGGCGGCTCCTGAAATTATCAAAGCTTC
 
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rJMSF003O06-          CGCCACTCTCGGAACCGGCGCGTGGGCTCCACTCTCCACTTTCACTACTATCCACCCCGC
JMFN037C17+           CGCCACTCTCGGAACCGGCGCGTGGGCTCCACTCTCCACTTTCACTACTATCCACCCCGC
                      ____________________________________________________________
consensus             CGCCACTCTCGGAACCGGCGCGTGGGCTCCACTCTCCACTTTCACTACTATCCACCCCGC
 
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rJMSF003O06-          GCCGCCGATCGTTCGCCATCCCATCAACCGTCGACCACACGTCGTCTTCTCCGAGCTCCG
JMFN037C17+           GCCGCCGATCGTTCGCCATCCCATCAACCGTCGACCACACGTCGTCTTCTCCGAGCTCCG
JMSF003O06+                                                                   TCCG
                      ____________________________________________________________
consensus             GCCGCCGATCGTTCGCCATCCCATCAACCGTCGACCACACGTCGTCTTCTCCGAGCTCCG
 
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rJMSF003O06-          ATTCGCAGCCGGCGATCCTTCCATGGCTGTCACTGTTACTGTAACTGTAACTACCTAACA
JMFN037C17+           ATTCGCAGCCGGCGATCCTTCCATGGCTGTCACTGTTACTGTAACTGTAACTACCTAACA
JMSF003O06+           ATTCGCAGCCGGCGATCCTTCCATGGCTGTCACTGTTACTGTAACTGTAACTACCTAACA
                      ____________________________________________________________
consensus             ATTCGCAGCCGGCGATCCTTCCATGGCTGTCACTGTTACTGTAACTGTAACTACCTAACA
 
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rJMSF003O06-          GCCTCTCGCTCCAACTAGCAGTCAGCTTTCTACCCCTTAGCCATTTTCGTCACCGTTCAC
JMFN037C17+           GCCTCTCGCTCCAACTAGCAGTCAGCTTTCTA-CCCTTAGCCATTTTCGTCACCGTTCAC
JMSF003O06+           GCCTCTCGCTCCAACTAGCAGTCAGCTTTCTA-CCCTTAGCCATTTTCGTCACCGTTCAC
                      ____________________________________________________________
consensus             GCCTCTCGCTCCAACTAGCAGTCAGCTTTCTA-CCCTTAGCCATTTTCGTCACCGTTCAC
 
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rJMSF003O06-          CGCTATACATGTCGCGTTTAACAAATCTTTATTTTCC                       
JMFN037C17+           CGCTATACATGTCGCGTTTAACAAATCTTTATTTTCCGGCGAAGAACGACGAAGGTATAT
JMSF003O06+           CGCTATACATGTCGCGTTTAACAAATCTTTATTTTCCGGCGAAGAACGACGAAGGTATAT
                      ____________________________________________________________
consensus             CGCTATACATGTCGCGTTTAACAAATCTTTATTTTCCGGCGAAGAACGACGAAGGTATAT
 
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JMFN037C17+           TATATATTCATAACAGTATGTGCTACCGGAGTTCTTGATTTTCCGGTGACCAAATAAGGA
JMSF003O06+           TATATATTCATAACAGTATGTGCTACCGGAGTTCTTGATTTTCCGGTGACCAAATAAGGA
                      ____________________________________________________________
consensus             TATATATTCATAACAGTATGTGCTACCGGAGTTCTTGATTTTCCGGTGACCAAATAAGGA
 
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JMFN037C17+           AATTTAATTAGAATGTT                                           
JMSF003O06+           AATTTAATTAGAATGTTGTGTATTCTATAGCTCCGGCAGGAAATGGTAGCTATAAACGTC
                      ____________________________________________________________
consensus             AATTTAATTAGAATGTTGTGTATTCTATAGCTCCGGCAGGAAATGGTAGCTATAAACGTC