Contig 011878:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019G10Sequence471011878 (4)emb|CBI30871.3|5e-08unnamed protein product [Vitis vinifera]634004000 (4)ref|XP_002519694.1|4e-53endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative
JMFS149D01Sequence613011878 (4)ref|XP_009804744.1|5e-21PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 [Nicotiana sylve
JMSF003H01Sequence386011878 (4)697004000 (4)ref|XP_010279652.1|5e-70PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 [Nelumbo nucifer
JMSF034C09Sequence623011878 (4)gb|KJB57244.1|2e-19hypothetical protein B456_009G155100 [Gossypium raimondii]701004000 (4)ref|XP_002519694.1|9e-70endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative

Alignment

This contig is upended


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JMFS149D01+                 TCCATCAGCAATGAAATTTCTTCCTTCCTTAGACTCACCATTTTTTGCTATATC
JMSF034C09+                                              TAGACTCACCATTTTTTGCTATATC
                      ____________________________________________________________
consensus                   TCCATCAGCAATGAAATTTCTTCCTTCCTTAGACTCACCATTTTTTGCTATATC
 
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JMFS149D01+           ATGAGAGACAGAATGAAGGGTACTGGCGTGGGTCATCATGAGACATACTAAACCACCAAT
JMSF034C09+           ATGAGAGACAGAATGAAGGGTACTGGCGTGGGTCATCATGAGACATACTAAACCACCAAT
                      ____________________________________________________________
consensus             ATGAGAGACAGAATGAAGGGTACTGGCGTGGGTCATCATGAGACATACTAAACCACCAAT
 
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JMFS149D01+           CAATAATAATCCAAGAAATTTCCCTGTGCTGCATTTTACATGTTCCGGATTAACCTTACT
JMSF034C09+           CAATAATAATCCAAGAAATTTCCCTGTGCTGCATTTTACATGTTCCGGATTAACCTTACT
                      ____________________________________________________________
consensus             CAATAATAATCCAAGAAATTTCCCTGTGCTGCATTTTACATGTTCCGGATTAACCTTACT
 
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JMFS149D01+           GGTTAAGAGTGCTTGAGAAATTGCCTTAGACACCGATCGGTGCCGGAACTTTCCGTTGTC
JMFF019G10+             TTAAGAGTGCTTGAGAAATTGCCTTAGACACCGATCGGTGCCGGAACTTTCCGTTGTC
JMSF034C09+           GGTTAAGAGTGCTTGAGAAATTGCCTTAGACACCGATCGGTGCCGGAACTTTCCGTTGTC
                      ____________________________________________________________
consensus             GGTTAAGAGTGCTTGAGAAATTGCCTTAGACACCGATCGGTGCCGGAACTTTCCGTTGTC
 
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JMFS149D01+           GTAGTGCACATCTTTCATCGAATACGGCAACGATTTCGACATCTCCCGATCGAATCAACG
JMFF019G10+           GTAGTGCACATCTTTCATCGAATACGGCAACGATTTCGACATCTCCCGATCGAATCAACG
JMSF034C09+           GTAGTGCACATCTTTCATCGAATACGGCAACGATTTCGACATCTCCCGATCGAATCAACG
JMSF003H01+                                             TTCGACATCTCCCGATCGAATCAACG
                      ____________________________________________________________
consensus             GTAGTGCACATCTTTCATCGAATACGGCAACGATTTCGACATCTCCCGATCGAATCAACG
 
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JMFS149D01+           GCCAGCGGCTCCCGATTCTCTCCCCAAGTGCGGCACGCGTGTGTGCACGTATATACGTGC
JMFF019G10+           GCCAGCGGCTCCCGATTCTCTCCCCAAGTGCGGCACGCGTGTGTGCACGTATATACGTGC
JMSF034C09+           GCCAGCGGCTCCCGATTCTCTCCCCAAGTGCGGCACGCGTGTGTGCACGTATATACGTGC
JMSF003H01+           GCCAGCGGCTCCCGATTCTCTCCCCAAGTGCGGCACGCGTGTGTGCACGTATATACGTGC
                      ____________________________________________________________
consensus             GCCAGCGGCTCCCGATTCTCTCCCCAAGTGCGGCACGCGTGTGTGCACGTATATACGTGC
 
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JMFS149D01+           GGTTGTCGGAGTATGTAGCTGGCCGGTGTTCTTCCGGATAAGGAAGAACAGAAATGAAAG
JMFF019G10+           GGTTGTCGGAGTATGTAGCTGGCCGGTGTTCTTCCGGATAAGGAAGAACAGAAATGAAAG
JMSF034C09+           GGTTGTCGGAGTATGTAGCTGGCCGGTGTTCTTCCGGATAAGGAAGAACAGAAATGAAAG
JMSF003H01+           GGTNGTCGGAGTATGTAGCTGGCCGGTGTTCTTCCGGATAAGGAAGAACAGAAATGAAAG
                      ____________________________________________________________
consensus             GGTTGTCGGAGTATGTAGCTGGCCGGTGTTCTTCCGGATAAGGAAGAACAGAAATGAAAG
 
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JMFS149D01+           AATCTAGAGAGAGAGAGAGAGAATTTGTGGATCGCGGGAATTCAGTTTCCTGTTTCTCCT
JMFF019G10+           AATCT----AGAGAGAGAGAGAATTTGTGGATCGCGGGAATTCAGTTTCCTGTTTCTCCT
JMSF034C09+           AATCTAGAGAGAGAGAGAGAGAATTTGTGGATCGCGGGAATTCAGTTTCCTGTTTCTCCT
JMSF003H01+           AATCTAGAGAGAGAGAGAGAGAATTTGTGGATCGCGGGAATTCAGTTTCCTGTTTCTCCT
                      ____________________________________________________________
consensus             AATCTAGAGAGAGAGAGAGAGAATTTGTGGATCGCGGGAATTCAGTTTCCTGTTTCTCCT
 
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JMFS149D01+           TTGATTGAATTCGGAGATTAGGGCGGTCGGATTGGAAGATTTTTCTTGGTTCCGCGGGCT
JMFF019G10+           TTGATTGAATTCGGAGATTAGGGCGGTCGGATTGGAAGATTTTTCTTGGTTCCGCGGGCT
JMSF034C09+           TTGATCGAATTCGGAGATTAGGGCGGTCGGATTGGAAGATTTTTCTTGGTTCCGCGGGCT
JMSF003H01+           TTGATTGAATTCGGAGATTAGGGCGGTCGGATTGGAAGATTTTTCTTGGTTCCGCGGGCT
                      ____________________________________________________________
consensus             TTGATTGAATTCGGAGATTAGGGCGGTCGGATTGGAAGATTTTTCTTGGTTCCGCGGGCT
 
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JMFS149D01+           GGCGCGGCCGGTCAGTTTTTGCCGGCGGGCGGCATGTGCGTCGACGCGTCGTCCAGAGTC
JMFF019G10+           GGCGCGGCCGGTCAGTTTTTGCCGGCGGGCGGCATGTGCGTCGACGCGTCGTCCAGAGTC
JMSF034C09+           GGCGCGGCCGGTCAGTTTTTGCCGGCGGGCGGCATGTGCGTCGACGCGTCGTCCAGAGTC
JMSF003H01+           GGCGCGGCCGGTCAGTTTTTGCCGGCGGGCGGCATGTGCGTCGACGCGTCGTCCAGAGTC
                      ____________________________________________________________
consensus             GGCGCGGCCGGTCAGTTTTTGCCGGCGGGCGGCATGTGCGTCGACGCGTCGTCCAGAGTC
 
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JMFS149D01+           AATAGGATCGCTTGACTTC                                         
JMFF019G10+           AATAGGATCGCTTGACTTCTATGACGCCAATATTTTTTTCTAATTTCATCACAACTC   
JMSF034C09+           AATAGGATCGCTTGACTTCTATGACGCCAATATTTTTTTCTAATTTCATCACAACTC   
JMSF003H01+           AATAGGATCGCTTGACTTCTATGACGCCAATATTTTTTTCTAATTTCATCACAACTCGTC
                      ____________________________________________________________
consensus             AATAGGATCGCTTGACTTCTATGACGCCAATATTTTTTTCTAATTTCATCACAACTCGTC