| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013J23 | Sequence | 508 | 011877 (5) | 620 | 009125 (7) | ref|XP_009778431.1| | 8e-65 | PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris] | |||
| JMFF033N22 | Sequence | 510 | 011877 (5) | ref|XP_004233034.1| | 2e-06 | PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum] | 748 | 009125 (7) | ref|XP_009778431.1| | 3e-91 | PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris] |
| JMFF039D05 | Sequence | 532 | 011877 (5) | ref|NP_001275105.1| | 2e-09 | ACRE 276-like protein [Solanum tuberosum] gb|ABK96801.1| ACRE 276-like protein [ | 645 | 009125 (7) | ref|XP_009778431.1| | 3e-72 | PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris] |
| JMSF003C20 | Sequence | 313 | 011877 (5) | 768 | 009125 (7) | ref|XP_009778431.1| | 3e-121 | PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris] | |||
| JMSF032P15 | Sequence | 667 | 011877 (5) | ref|XP_004233034.1| | 1e-21 | PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum] | 680 | 009125 (7) | ref|XP_009778431.1| | 1e-94 | PREDICTED: U-box domain-containing protein 17 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF032P15+ TAATCAAGCAGGATTTTGGAGCGGTACAGCAGAAGGTA
____________________________________________________________
consensus TAATCAAGCAGGATTTTGGAGCGGTACAGCAGAAGGTA
. : . : . : . : . : . :
JMSF032P15+ CAGCTCTTTAAAGCACAGAAAAGCAGTAGAAGGAAACCTCGAAGAAGAAGAAGAAGAAGA
____________________________________________________________
consensus CAGCTCTTTAAAGCACAGAAAAGCAGTAGAAGGAAACCTCGAAGAAGAAGAAGAAGAAGA
. : . : . : . : . : . :
JMFF039D05+ GGAGAAAATNTGTATTTTNCGGAG
JMSF032P15+ AGAACCTCTGTTTTCTCGAAGGCATTCCATGGCGACGGAGAAAATCTGTATTTTACGGAG
____________________________________________________________
consensus AGAACCTCTGTTTTCTCGAAGGCATTCCATGGCGACGGAGAAAATCTGTATTTTACGGAG
. : . : . : . : . : . :
JMFF033N22+ CCGGCCCCTCCTTGCCGGAAAACGACGAAAT
JMFF013J23+ CCGGCCCCTCNTTGCCGGAAANNGNNGAAAT
JMFF039D05+ GAGAGATTTGGAGTTNTTCCGCTGGTACGCCGGCCCCTCCTTGCCGGAAAACGACGAAAT
JMSF032P15+ GAGAGATTTGGAGTTCTTCCGCTGGTACGCCGGCCCCTCCTTGCCGGAAAACGACGAAAT
____________________________________________________________
consensus GAGAGATTTGGAGTTCTTCCGCTGGTACGCCGGCCCCTCCTTGCCGGAAAACGACGAAAT
. : . : . : . : . : . :
JMFF033N22+ CAGCTCCGTTGCCAACGCCGCCAGCGTCTCCACCAACGCCCAGTCCGTCAGATCCAGCGG
JMFF013J23+ CAGCTCCGTTGCCAACGCCGCCAGNGTNTCCNCCAACGCCCAGTCCGTCAGATCCAGCGG
JMFF039D05+ CAGCTCCGTTGCCAACGCCGCCAGCGTCTCCACCAACGCCCAGTCCGTCAGATCCAGCGG
JMSF032P15+ CAGCTCCGTTGCCAACGCCGCCAGCGTCTCCACCAACGCCCAGTCCGTCAGATCCAGCGG
____________________________________________________________
consensus CAGCTCCGTTGCCAACGCCGCCAGCGTCTCCACCAACGCCCAGTCCGTCAGATCCAGCGG
. : . : . : . : . : . :
JMFF033N22+ CGCCAAGAACGCCTCCAGCGACGGCGACCGCCGCCGCCGCAACGACGAGAATATAGCCGC
JMFF013J23+ CGCCAAGAACGCCTCCAGCGACGGCGACCGCCGCCGCCGCAACGACGAGAATATAGCCGC
JMFF039D05+ CGCCAAGAACGCCTCCAGCGACGGCGACCGCCGCCGCCGCAACGACGAGAATATAGCCGC
JMSF032P15+ CGCCAAGAACGCCTCCAGCGACGGCGACCGCCGCCGCCGCAACGACGAGAATATAGCCGC
____________________________________________________________
consensus CGCCAAGAACGCCTCCAGCGACGGCGACCGCCGCCGCCGCAACGACGAGAATATAGCCGC
. : . : . : . : . : . :
JMFF033N22+ GGACGCCATTCAAAGTCAACAAACACCCACCCAACACCTCTTTCTCTCTCTAGACCGAAA
JMFF013J23+ GGACGCCATTCAAAGTCAACAAACACCCACCCAACACCTCTTTCTCTCTCTAGACCGAAA
JMFF039D05+ GGACGCCATTCAAAGTCAACAAACACCCACCCAACACCTCTTTCTCTCTCTAGACCGAAA
JMSF032P15+ GGACGCCATTCAAAGTCAACAAACACCCACCCAACACCTCTTTCTCTCTCTAGACCGAAA
JMSF003C20+ CTCTAGACCGAAA
____________________________________________________________
consensus GGACGCCATTCAAAGTCAACAAACACCCACCCAACACCTCTTTCTCTCTCTAGACCGAAA
. : . : . : . : . : . :
JMFF033N22+ AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
JMFF013J23+ AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
JMFF039D05+ AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
JMSF032P15+ AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
JMSF003C20+ AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
____________________________________________________________
consensus AAGCTTCGGTCTTTATTCCTCCCTCTCTCTCTCTCTCAAGAATTCGCAAACCCAGCCCAA
. : . : . : . : . : . :
JMFF033N22+ AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
JMFF013J23+ AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
JMFF039D05+ AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
JMSF032P15+ AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
JMSF003C20+ AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
____________________________________________________________
consensus AAATCCTCAAGAAATCTTCGGATTCCCGGAGAAGACGACTTCGAAAATTAATGGCGATCC
. : . : . : . : . : . :
JMFF033N22+ TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
JMFF013J23+ TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
JMFF039D05+ TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
JMSF032P15+ TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
JMSF003C20+ TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
____________________________________________________________
consensus TTTTTTATTAAGGAAATCAAAAAACCAATCTTTTTGAGTGCGTGAATTGAATATGTACAC
. : . : . : . : . : . :
JMFF033N22+ ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
JMFF013J23+ ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
JMFF039D05+ ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
JMSF032P15+ ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
JMSF003C20+ ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
____________________________________________________________
consensus ATATAAGGAAACTATTAATCGCAAATCCGCGTGAGAAGATGAAGAAGATATGAAAAAAGG
. : . : . : . : . : . :
JMFF033N22+ AAGAAGTTTGGAGAAAATGGTAAAGAAC
JMFF013J23+ AAGAAGTTTGGAGAAAATGGTAAAGAAC
JMFF039D05+ AAGAAGTTTGGAGAAAATGGTAAAGAAC
JMSF032P15+ AAGAAGTTTGGAGAAAATGGTAAAGAAC
JMSF003C20+ AAGAAGTTTGGAGAAAATGGTAAAGAACCAGGGGAAGCGTCTGGGGTAGTTGTATGCTTC
____________________________________________________________
consensus AAGAAGTTTGGAGAAAATGGTAAAGAACCAGGGGAAGCGTCTGGGGTAGTTGTATGCTTC