Contig 011869:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042B10Sequence639011869 (2)gb|KHG27300.1|1e-128hypothetical protein F383_34673 [Gossypium arboreum]646013796 (2)ref|XP_011086497.1|97.4PREDICTED: nucleolar GTP-binding protein 1-like [Sesamum indicum] ref|XP_0110864
JMSF002B21Sequence313011869 (2)gb|KHG27300.1|2e-37hypothetical protein F383_34673 [Gossypium arboreum]755013796 (2)ref|XP_009782696.1|174PREDICTED: nucleolar GTP-binding protein 1-like [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMFF042B10+                                                        TGTAATTTGTTAATG
                      ____________________________________________________________
consensus                                                          TGTAATTTGTTAATG
 
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JMFF042B10+           AATGAGCTCTTACCAACATTAGGGTACCCACAGATCAAGATTGTCCTAGTATTTGGATCA
                      ____________________________________________________________
consensus             AATGAGCTCTTACCAACATTAGGGTACCCACAGATCAAGATTGTCCTAGTATTTGGATCA
 
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JMFF042B10+           ATTGAAGGTAACCTTGCCATATGCTGCCTGATCTGTTCAAGATAAGCTAGACTGGGCGTA
                      ____________________________________________________________
consensus             ATTGAAGGTAACCTTGCCATATGCTGCCTGATCTGTTCAAGATAAGCTAGACTGGGCGTA
 
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JMFF042B10+           ATGCGCTTTATCACAGTACACATGCGGCCCAATGCAGCAATCTTCAAAGACTTGCAACGA
                      ____________________________________________________________
consensus             ATGCGCTTTATCACAGTACACATGCGGCCCAATGCAGCAATCTTCAAAGACTTGCAACGA
 
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JMFF042B10+           TACAGTGAATCACCATACTTCAACATTTTTACATAATCCTTACAAATCTTAGAAATCAAG
                      ____________________________________________________________
consensus             TACAGTGAATCACCATACTTCAACATTTTTACATAATCCTTACAAATCTTAGAAATCAAG
 
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JMFF042B10+           TTCCGTGCAGTATTTATTTGGCCAAGGGCAAGCTTGTAATGGTCTTTGTTGTAGAGAACG
                      ____________________________________________________________
consensus             TTCCGTGCAGTATTTATTTGGCCAAGGGCAAGCTTGTAATGGTCTTTGTTGTAGAGAACG
 
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JMFF042B10+           TGAAGAAGGTCACCATAGAAAGGATGGATATCATCAAGCCTGGGGAACTCATCAATGATG
JMSF002B21+                                                          CTCATCAATGATG
                      ____________________________________________________________
consensus             TGAAGAAGGTCACCATAGAAAGGATGGATATCATCAAGCCTGGGGAACTCATCAATGATG
 
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JMFF042B10+           GTGGAAAGTTTCTCATAGAAATTCTGTTGGGTGTATTTCACTTTGCGCATATAAAACTGA
JMSF002B21+           GTGGAAAGTTTCTCATAGAAATTCTGTTGGGTGTATTTCACTTTGCGCATATAAAACTGA
                      ____________________________________________________________
consensus             GTGGAAAGTTTCTCATAGAAATTCTGTTGGGTGTATTTCACTTTGCGCATATAAAACTGA
 
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JMFF042B10+           CGAATACGGGATATTGCATAGCCCTTATGAACAACAGTAGGTGTTTGCCGCTGTGTGCGA
JMSF002B21+           CGAATACGGGATATTGCATAGCCCTTATGAACAACAGTAGGTGTTTGCCGCTGTGTGCGA
                      ____________________________________________________________
consensus             CGAATACGGGATATTGCATAGCCCTTATGAACAACAGTAGGTGTTTGCCGCTGTGTGCGA
 
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JMFF042B10+           GAGAGAATGATATCAACAAAATCCTTCCCATTGGGAACAACAGTGATCTTTTTAAAATTA
JMSF002B21+           GAGAGAATGATATCAACAAAATCCTTCCCATTGGGAACAACAGTGATCTTTTTAAAATTA
                      ____________________________________________________________
consensus             GAGAGAATGATATCAACAAAATCCTTCCCATTGGGAACAACAGTGATCTTTTTAAAATTA
 
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JMFF042B10+           TACTGCACCATTTCTTATTATCTGGTCTTACCCCGGACTGGAAAACCCAGGTCGCAAGGG
JMSF002B21+           TACTGCACCATTTCTTATTATCTGGTCTTACCCCGGACTGGAAAACCCAGGTCGCAAGGG
                      ____________________________________________________________
consensus             TACTGCACCATTTCTTATTATCTGGTCTTACCCCGGACTGGAAAACCCAGGTCGCAAGGG
 
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JMFF042B10+           AAAACACCAAGGAGGAAAGGCGA                                     
JMSF002B21+           AAAACACCAAGGAGGAAAGGCGAGAGAGTATGTTGGGCTGGGAGAAACGCAGTTTTGAGC
                      ____________________________________________________________
consensus             AAAACACCAAGGAGGAAAGGCGAGAGAGTATGTTGGGCTGGGAGAAACGCAGTTTTGAGC