Contig 011863:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS020F12Sequence627011863 (3)emb|CDP00185.1|2e-53unnamed protein product [Coffea canephora]
JMFS133F01Sequence612011863 (3)ref|XP_006340113.1|3e-17PREDICTED: potassium transporter 6-like [Solanum tuberosum]
JMFS163F05Sequence617011863 (3)emb|CDP00185.1|4e-45unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS020F12+                          GAATACAAGGCAAATGTTCCCCCTTCACCATTATCATCAGCCTTA
JMFS133F01+                                                          ATCATCAGCCTTA
JMFS163F05+                                                  TCACCATTATCATCAGCNTTA
                      ____________________________________________________________
consensus                            GAATACAAGGCAAATGTTCCCCCTTCACCATTATCATCAGCCTTA
 
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JMFS020F12+           AGCACAATGAACACATATTTTAGGAGAGGGACCAAAGTCAATGTCCAGAAGATAAAGGAA
JMFS133F01+           AGCACAATGAACACATATCTTAGCAGAGGGATCACAGTCAATGTTCAGTAGATAAAGGTA
JMFS163F05+           AGCACAATGACNACATATTTTAGGAGAGGGACCAAAGTCAATGTCCAGAAGATAAAGGAA
                      ____________________________________________________________
consensus             AGCACAATGAACACATATTTTAGGAGAGGGACCAAAGTCAATGTCCAGAAGATAAAGGAA
 
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JMFS020F12+           AGAACCCCATAGATTTCTTCATTGGTCTCTGAATGCTCA-ATATCCTCAGCAAAAGTACT
JMFS133F01+           ACAACNCCATAGATGTCTTCATTGGTCTATGAATGATCATATATCATCAGCAAAAGTACT
JMFS163F05+           AGAACCCCATAGATTTCTTCATTGGTCTCTGAATGCTCA-ATATCCTCAGCAAAAGTACT
                      ____________________________________________________________
consensus             AGAACCCCATAGATTTCTTCATTGGTCTCTGAATGCTCA-ATATCCTCAGCAAAAGTACT
 
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JMFS020F12+           TTTGAACACATACAATGGGGATGTACTCAAATCCCCATAGACAACACCCAAACTCTGATA
JMFS133F01+           TTTGAACACTTACGAGGTGGATGTACTCGAATCCTCATAGACAACACGCAAACTCTGATA
JMFS163F05+           TTTGAACACATACAATGGGGATGTACTCAAATCCCCATAGACAACACCCAAACTCTGATA
                      ____________________________________________________________
consensus             TTTGAACACATACAATGGGGATGTACTCAAATCCCCATAGACAACACCCAAACTCTGATA
 
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JMFS020F12+           TGCC-AATGTCAAAACTGTCCTCCAAGATTGTCTCTTTAAACTATTCTGGCGAAACCCGG
JMFS133F01+           TGCCAAATGTCAAGACTGTCCTCCAAGGTTGTCTCTTTAGATTATTCTGGAAAAACACGG
JMFS163F05+           TGCC-AATGTCAAAACTGTCCTCCAAGATTGTCTCTTTAAACTATTCTGGCGAAACCCGG
                      ____________________________________________________________
consensus             TGCC-AATGTCAAAACTGTCCTCCAAGATTGTCTCTTTAAACTATTCTGGCGAAACCCGG
 
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JMFS020F12+           TCTCCAGATCCATAGCAAATCCTCTCAAAACTGCAAGAAAACCATTTCCACACCAAATTC
JMFS133F01+           TGTCCAGATCCATAGCAAATCCTATTGTAGCTGCAAGAGAACCATTTGTATACCAAATTC
JMFS163F05+           TCTCCAGATCCATAGCAAATCCTCTCAAAACTGCAAGAAAACCATTTCCACACCAAATTC
                      ____________________________________________________________
consensus             TCTCCAGATCCATAGCAAATCCTCTCAAAACTGCAAGAAAACCATTTCCACACCAAATTC
 
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JMFS020F12+           AACAACTTCAAAGCTGACCCATCTGATGATACTACCCACCCCAGAAAAGAACTTTCAAGA
JMFS133F01+           ACCAACTTCAAAGTTGACCCATATAATGAGTCTACCCACCCCAGAAAAGAACTTTCAAGA
JMFS163F05+           AACAACTTCAAAGCTGACCCATCTGATGATACTACCCACCCCAGAAAAGAACTTTCAAGA
                      ____________________________________________________________
consensus             AACAACTTCAAAGCTGACCCATCTGATGATACTACCCACCCCAGAAAAGAACTTTCAAGA
 
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JMFS020F12+           AAACACACTCTGACGCAGAGCACAAAGCCAAGGGGGGGAAATTTTTTTTTTCTTATACAC
JMFS133F01+           ACACTCTCTCTGACGCAGAGCACGTAGCCAAGCGGGGGGAAATTTTTTTTTGTTATACTC
JMFS163F05+           AAACACACTCTGACGCAGAGCACAAAGCCAAG-GGGGGGAAATTTTTTTTTCTTATACAC
                      ____________________________________________________________
consensus             AAACACACTCTGACGCAGAGCACAAAGCCAAGGGGGGGGAAATTTTTTTTTCTTATACAC
 
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JMFS020F12+           AAAAATAAGATAAAATAATAGCAGTTGTGCAAATAGCAGTTGAACAACCTCCTATGAGGA
JMFS133F01+           AACAATAAGATAAAATAATAGCAGTTGTGCAAATAGCAGGTGATCGACCTCCTATGAGTA
JMFS163F05+           AAAAATAAGATAAAATAATAGCAGTTGTGCAAATAGCAGTTGAACAACCTCCTATGAGGA
                      ____________________________________________________________
consensus             AAAAATAAGATAAAATAATAGCAGTTGTGCAAATAGCAGTTGAACAACCTCCTATGAGGA
 
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JMFS020F12+           AAAACAAACACCAAAAGCCACAATTTTTTTGCATAAACAAA-GTTTAAGGGAAGCCAGTT
JMFS133F01+           AAAACAACCTCCAAAAGCCGCAATTTTTTGCAGTAAACAAATGTTTAAGGAGAGCCAGTT
JMFS163F05+           AAAACAAACACCAAAAGCCACAATTTTTTTGCATAAACAAA-GTTTAAGGGAAGCCAGTT
                      ____________________________________________________________
consensus             AAAACAAACACCAAAAGCCACAATTTTTTTGCATAAACAAA-GTTTAAGGGAAGCCAGTT
 
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JMFS020F12+           GGAGGATCAGGGCATAAGATTAGAGAATATTTCCCATATGACAGT               
JMFS133F01+           GCAGGATCAGGGCATAAAATTAGAGAATATTTCCCATATGACAGTGAGAG          
JMFS163F05+           GGAGGATCAGGGCATAAGATTAGAGAATATTTCCCATATGACAGTGAGAGAAACACATCA
                      ____________________________________________________________
consensus             GGAGGATCAGGGCATAAGATTAGAGAATATTTCCCATATGACAGTGAGAGAAACACATCA