Contig 011861:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I13Sequence527011861 (14)dbj|BAK19067.1|2e-59GIGANTEA [Ipomoea nil]
JMFF012H22Sequence573011861 (14)gb|EYU30283.1|4e-57hypothetical protein MIMGU_mgv1a000455mg [Erythranthe guttata]738002699 (3)dbj|BAK19067.1|7e-92GIGANTEA [Ipomoea nil]
JMFF035P02Sequence426011861 (14)dbj|BAK19067.1|2e-49GIGANTEA [Ipomoea nil]694002699 (3)dbj|BAK19067.1|2e-81GIGANTEA [Ipomoea nil]
JMFF046K07Sequence636011861 (14)dbj|BAK19067.1|1e-93GIGANTEA [Ipomoea nil]623002699 (3)dbj|BAK19067.1|3e-47GIGANTEA [Ipomoea nil]
JMFS021A12Sequence611011861 (14)ref|XP_006359040.1|5e-98PREDICTED: protein GIGANTEA-like isoform X2 [Solanum tuberosum]
JMFS031A09Sequence422011861 (14)dbj|BAK19067.1|1e-71GIGANTEA [Ipomoea nil]
JMFS066B02Sequence628011861 (14)dbj|BAK19067.1|8e-142GIGANTEA [Ipomoea nil]
JMFS068C12Sequence614011861 (14)dbj|BAK19067.1|8e-138GIGANTEA [Ipomoea nil]
JMFS087C11Sequence621011861 (14)dbj|BAK19067.1|2e-69GIGANTEA [Ipomoea nil]
JMFS100D03Sequence617011861 (14)dbj|BAK19067.1|2e-138GIGANTEA [Ipomoea nil]
JMFS137B08Sequence616011861 (14)dbj|BAK19067.1|1e-62GIGANTEA [Ipomoea nil]
JMFS154E09Sequence622011861 (14)dbj|BAK19067.1|4e-117GIGANTEA [Ipomoea nil]
JMFS158B12Sequence440011861 (14)dbj|BAK19067.1|4e-19GIGANTEA [Ipomoea nil]
JMFS161G08Sequence623011861 (14)dbj|BAK19067.1|8e-62GIGANTEA [Ipomoea nil]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+                                                  TCCATTCAACCTCGGGGCCAT
                      ____________________________________________________________
consensus                                                    TCCATTCAACCTCGGGGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           GTGCACAAAGCATTGACGCAATCCCTTGGGCAGTTGCTTCAACCGTGGCTTCAATTTCGG
                      ____________________________________________________________
consensus             GTGCACAAAGCATTGACGCAATCCCTTGGGCAGTTGCTTCAACCGTGGCTTCAATTTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           GTATATCTCTCTGTTTTCTATCCCAAGAAATGTAACCACCCAGGGGTTCGTGTTGGACTC
                      ____________________________________________________________
consensus             GTATATCTCTCTGTTTTCTATCCCAAGAAATGTAACCACCCAGGGGTTCGTGTTGGACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           CAACTCCTTCCACTTGTCTTAACGGGGGGAAAAGTAAAGCGGGCTGTGAAAGTATTCGGA
                      ____________________________________________________________
consensus             CAACTCCTTCCACTTGTCTTAACGGGGGGAAAAGTAAAGCGGGCTGTGAAAGTATTCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           AAAGTAAGGCAGCTGCAGCATCTGCAGCAATACCCGCTCTCATGGACATTGCAATTCCAA
                      ____________________________________________________________
consensus             AAAGTAAGGCAGCTGCAGCATCTGCAGCAATACCCGCTCTCATGGACATTGCAATTCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           TTGCACGCAAGAAATGTAAATGCATCCAATTCCGAGGAAGCCGCAATCCAGATGCATAAT
JMFS154E09+                                  ATCCAATTTCGAGGAAGCCGCAATCCAGATGCATAAT
                      ____________________________________________________________
consensus             TTGCACGCAAGAAATGTAAATGCATCCAATTTCGAGGAAGCCGCAATCCAGATGCATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           CTTCGGCTGCTCGAAGAAGTTCAACTAGTTGTACGGAAGCATCAAGTGCATCAGGAGCCC
JMFS154E09+           CTTCTGCTGCTCGAAGAAGTTCCACTAGTTGTACAGCAGCATCAAGTGCATCAGGAGCCC
                      ____________________________________________________________
consensus             CTTCTGCTGCTCGAAGAAGTTCCACTAGTTGTACGGCAGCATCAAGTGCATCAGGAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           AAGAAGGCGGAGCTTCTAAAAGTCCAAGCAGAAGCCTCTGTGTGGCACTTGGGCTAGCAA
JMFS031A09+                                                                   GCAA
JMFS154E09+           ATGAAGGTGGAGCTTCTAAAAGTCCAAGCAGAAGCCTTTGAGTGGCACTTGGACTTGCAA
                      ____________________________________________________________
consensus             ATGAAGGTGGAGCTTCTAAAAGTCCAAGCAGAAGCCTTTGTGTGGCACTTGGGCTTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           TGGCATAGTATCGATGAAATAAACGTGCATATGGCTCCAGTGCTGGTAGGCCAACAACTA
JMFS031A09+           TTGCATAGTATCGATGAAATAATCGTGCATATGGCTCCAGAGCTGGAAGCCCTGCAACAA
JMFS154E09+           TTGCATAGTATCGATGAAATAATCGTGCATATGGCTCCAGAGCTGGAAGCCCTGCAACAA
                      ____________________________________________________________
consensus             TTGCATAGTATCGATGAAATAATCGTGCATATGGCTCCAGAGCTGGAAGCCCTGCAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           GATGCTCATCCATGGGTGTTGTCGGTGGTGGCAGCAGAAGTGCAGGAACAGCAATGGCAG
JMFS031A09+           GATGCTCATCCATAGGCGTTGTCGGGGGTGGCAGCAGCAGTGCAGGAACAGCAATCGCAG
JMFS154E09+           GATGCTCATCCATAGGCGTTGTCGGGGGTGGCAGCAGCAGTGCAGGAACAGCAATCGCAG
JMFS068C12+                                                                  CGCAG
JMFS100D03+                                                                  CGCAG
                      ____________________________________________________________
consensus             GATGCTCATCCATAGGCGTTGTCGGGGGTGGCAGCAGCAGTGCAGGAACAGCAATCGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021A12+           TTAAGGTTGCAGTCTCATAGCGAGAAACTTCCTCATCACAAACGCTTAAT          
JMFS031A09+           TTAAGGTAGCAGTCTCATAACGAGCAACTTCCTCATCACAAACACTTAATATAACACCAG
JMFS154E09+           TTAAGGTAGCAGTCTCATAACGAGCAACTTCCTCATCACAAACACTTAATATAACACCAG
JMFS068C12+           TTAAGGTAGCAGTCTCATAACGAGCAACTTCCTCATCACAAACACTTAATATAACACCAG
JMFS100D03+           TTAAGGTAGCAGTCTCATAACGAGCAACTTCCTCATCACAAACACTTAATATAACACCAG
JMFS066B02+                                                             ATAACACCAG
                      ____________________________________________________________
consensus             TTAAGGTAGCAGTCTCATAACGAGCAACTTCCTCATCACAAACACTTAATATAACACCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS031A09+           CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
JMFS154E09+           CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
JMFS068C12+           CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
JMFS100D03+           CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
JMFS066B02+           CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
                      ____________________________________________________________
consensus             CACCATTAGCAACGGCCCACCTTGGAGTTGAAGGTATTAGTTGTGGATGCTTTCCAGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS031A09+           CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
JMFS154E09+           CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
JMFS068C12+           CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
JMFS100D03+           CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
JMFS066B02+           CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
                      ____________________________________________________________
consensus             CACGGGAAGAAGCAGTTGAAGGTGGCTTGAGTTCTCCAGCAGCATACTTTCCCATAACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS031A09+           CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
JMFS154E09+           CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
JMFS068C12+           CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
JMFS100D03+           CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
JMFS066B02+           CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
                      ____________________________________________________________
consensus             CACTACACCACCGGAAGTAGTCACTTCTAATACCTAGAGGTGCTGCCAGCAATATATCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS031A09+           TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACA      
JMFS154E09+           TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACAAACTAG
JMFS068C12+           TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACAAACTAG
JMFS100D03+           TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACAAACTAG
JMFS066B02+           TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACAAACTAG
                      ____________________________________________________________
consensus             TAATCCATGGAGACAACAGCCTCAGTGGTTTCCTCTCATGTTGCGGAGACAACAAACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS154E09+           GGCCCCCATCAGCAGATTTACTTGTTGAAGCATGGCTGCCACTGT               
JMFS068C12+           GGCCCCCATCAGCAGATTTACTTGTTGAAGCATGGCTGCCACTGTTACTTCTATCTGCTT
JMFS100D03+           GGCCCCCATCAGCAGATTTACTTGTTGAAGCATGGCTGCCACTGTTACTTCTATCTGCTT
JMFS066B02+           GGCCCCCATCAGCAGATTTACTTGTTGAAGCATGGCTGCCACTGTTACTTCTATCTGCTT
                      ____________________________________________________________
consensus             GGCCCCCATCAGCAGATTTACTTGTTGAAGCATGGCTGCCACTGTTACTTCTATCTGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068C12+           CACTATCTTGCTTTTCAACTTTGTAAACCGGGCGGTTATAGTGGGTTAATATACGTAAAA
JMFS100D03+           CACTATCTTGCTTTTCAACTTTGTAAACCGGGCGGTTATAGTGGGTTAATATACGTAAAA
JMFS066B02+           CACTATCTTGCTTTTCAACTTTGTAAACCGGGCGGTTATAGTGGGTTAATATACGTAAAA
JMFF046K07+                                           CGGTTATAGTGGGTTAATATACGTAAAA
                      ____________________________________________________________
consensus             CACTATCTTGCTTTTCAACTTTGTAAACCGGGCGGTTATAGTGGGTTAATATACGTAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068C12+           TTTCTCCACAAGCAAGAGCCCATTGTTCAGAAAGTTCATTCTGACTGTTTGGACAGACCA
JMFS100D03+           TTTCTCCACAAGCAAGAGCCCATTGTTCAGAAAGTTCATTCTGACTGTTTGGACAGACCA
JMFS066B02+           TTTCTCCACAAGCAAGAGCCCATTGTTCAGACAGTTCATTCTGACTGTTTGGACAGACCA
JMFF012H22+               TCCACAAGCAAGAGCCCATTGTTCAGAAAGTTCATTCTGACTGTTTGGACAGACCA
JMFF001I13+                                                             GGACAGACCA
JMFF046K07+           TTTCTCCACAAGCAAGAGCCCATTGTTCAGAAAGTTCATTCTGACTGTTTGGACAGACCA
                      ____________________________________________________________
consensus             TTTCTCCACAAGCAAGAGCCCATTGTTCAGAAAGTTCATTCTGACTGTTTGGACAGACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068C12+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFS100D03+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFS066B02+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFF012H22+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFF001I13+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFF046K07+           ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFS087C11+                ATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
JMFS137B08+                                           TTATCATACTCCAATGTACCATCAATGA
JMFS161G08+                                               CATACTCCAATGTACCATCAATGA
                      ____________________________________________________________
consensus             ATGAAATGAAAGAGGCAAAAGGTGGACTATTTTTATCATACTCCAATGTACCATCAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068C12+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFS100D03+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFS066B02+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFF012H22+           TACATGAGATAATTGGATGAATAACAGCCATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFF001I13+           TACATGAGATAATTGGATGAATAACAGCCATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFF046K07+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFF035P02+                                          GCCCATGCTCTGGATGATGGAGGAGAAAT
JMFS087C11+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFS137B08+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
JMFS161G08+           TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
                      ____________________________________________________________
consensus             TACATGAGATAATTGGATGAATAACAG-CATGCCCATGCTCTGGATGATGGAGGAGAAAT
 
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JMFS068C12+           GTTGCCAAAA                                                  
JMFS100D03+           GTTGCCAAAACA                                                
JMFS066B02+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFF012H22+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFF001I13+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFF046K07+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFF035P02+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFS087C11+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFS137B08+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
JMFS161G08+           GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
                      ____________________________________________________________
consensus             GTTGCCAAAACATCATCAAAAAGTCGGTTTTCTTTGGATGGGTAGCGATTTCGGATCAGC
 
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JMFS066B02+           TCAGCTATATCTTCAGGAA                                         
JMFF012H22+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
JMFF001I13+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
JMFF046K07+           TCAGCTATATCTTCAGGAAAATGTTCTGAGGTAAACTGACCAAAATACTCAACATAGGCA
JMFF035P02+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
JMFS087C11+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
JMFS158B12+                                      GATGTAAACTGACCAAAATACTCAACATAGGCA
JMFS137B08+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
JMFS161G08+           TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
                      ____________________________________________________________
consensus             TCAGCTATATCTTCAGGAAAATGTTCTGATGTAAACTGACCAAAATACTCAACATAGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012H22+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
JMFF001I13+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
JMFF046K07+           GTAATTTGATCCGTCCGTTGCTGTGCATCCTGGGGAGGCGGCCAAAACAATGAAGAGAAC
JMFF035P02+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
JMFS087C11+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
JMFS158B12+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAACCAATGAAGAGAAC
JMFS137B08+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
JMFS161G08+           GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
                      ____________________________________________________________
consensus             GTAATTTGATCCTTCCGTTGCTGTGCATCCTGTGGAGGCGGCCAAAACAATGAAGAGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012H22+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFF001I13+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFF046K07+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFF035P02+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFS087C11+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFS158B12+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFS137B08+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
JMFS161G08+           TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
                      ____________________________________________________________
consensus             TGAAGGCGATCAATCCACCTTTCACATGAAGCAGCCATATACCTATCGACCAGCCAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012H22+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFF001I13+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFF046K07+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFF035P02+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFS087C11+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFS158B12+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFS137B08+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
JMFS161G08+           CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
                      ____________________________________________________________
consensus             CTTTTACTATAAGAAAAGCATGGTGACAAGTAAAGCCTCAAAGCTCCACTTCTGTCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012H22+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFF001I13+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFF046K07+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTATATCTTCCAATGAGT
JMFF035P02+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFS087C11+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFS158B12+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFS137B08+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
JMFS161G08+           AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
                      ____________________________________________________________
consensus             AAATCACGGACCGATACTCAATAGATTGTAATTCAACATTTTCTAGATCTTCCAATGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012H22+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTC                       
JMFF001I13+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTC                       
JMFF046K07+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTC                       
JMFF035P02+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTC                       
JMFS087C11+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTCGAGAAAAAGAAGTAATTGGTGCA
JMFS158B12+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTCGAGAAAAAGAAGTAATTGGTGCA
JMFS137B08+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTCGAGAAAAAGAAGTAATTGGTGCA
JMFS161G08+           TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTCGAGAAAAAGAAGTAATTGGTGCA
                      ____________________________________________________________
consensus             TAATCACAGTGATTGCTGATAAAATTGCAGGAGATTCGAGAAAAAGAAGTAATTGGTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087C11+           AATTAGTGAATATTTTGGTTTCTTCTCAGGGCTGCAGTAACAGTAAATGCAAGATTTTGG
JMFS158B12+           AATTAGTGAATATTTTGGTTTCTTCTCAGGGCTGCAGTAACAGTAAATGCAAGATTTTGG
JMFS137B08+           AATTAGTGAATATTTTGGTTTCTTCTCAGGGCTGCAGTAACAGTAAATGCAAGATTTTGG
JMFS161G08+           AATTAGTGAATATTTTGGTTTCTTCTCAGGGCTGCAGTAACAGTAAATGCAAGATTTTGG
                      ____________________________________________________________
consensus             AATTAGTGAATATTTTGGTTTCTTCTCAGGGCTGCAGTAACAGTAAATGCAAGATTTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087C11+           TGGTAAATAAAATTTGGGTGGAGA                                    
JMFS158B12+           TGGTAAATAAAATTTGGGTGGAGACAGGTCGGAGAGAGAGAGAGAGA             
JMFS137B08+           TGGTAAATAAAATTTGGGTGGAGAGAGGTCGGAGAGAGAGAGAGAGA             
JMFS161G08+           TGGTAAATAAAATTTGGGTGGAGAGAGGTCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             TGGTAAATAAAATTTGGGTGGAGAGAGGTCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG