Contig 011860:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS160H02Sequence427011860 (2)
JMSF020P17Sequence671011860 (2)ref|XP_009619467.1|3e-133PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]718009048 (2)emb|CDO99813.1|9e-73unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF020P17+               TCCGCCAGGAATCACGAGAGCTGTATCGTCATCCCATTCTTCCTCAATAAAAGGTG
                      ____________________________________________________________
consensus                 TCCGCCAGGAATCACGAGAGCTGTATCGTCATCCCATTCTTCCTCAATAAAAGGTG
 
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JMSF020P17+           CATATCTGTCACCATTAGGTGGTCCCAAACCACTTTTCTGAAAAATTCTACATAGCACAA
                      ____________________________________________________________
consensus             CATATCTGTCACCATTAGGTGGTCCCAAACCACTTTTCTGAAAAATTCTACATAGCACAA
 
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JMSF020P17+           ATGCGTCCTGTATCACCCCAGCCTTCACTAATTCTTCATCTGCAAGCCTATATTCATGCA
                      ____________________________________________________________
consensus             ATGCGTCCTGTATCACCCCAGCCTTCACTAATTCTTCATCTGCAAGCCTATATTCATGCA
 
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JMSF020P17+           TTACCCAATTCGTCCTCTTTCCATCGGGAGCCCGCCCGCTATGGAATACAAGAGTTTTTT
                      ____________________________________________________________
consensus             TTACCCAATTCGTCCTCTTTCCATCGGGAGCCCGCCCGCTATGGAATACAAGAGTTTTTT
 
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JMSF020P17+           TCATTCCAATTGTCTGAGTCTTATGGCGCACAGAGCGATCCTTCCCGGTTGCCTTCCAAT
                      ____________________________________________________________
consensus             TCATTCCAATTGTCTGAGTCTTATGGCGCACAGAGCGATCCTTCCCGGTTGCCTTCCAAT
 
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JMSF020P17+           ACCCTTTGCCAGTCGCCCTATTAAGTCGAGACCCATTTCCATACTTCCTATCTACGGGGC
                      ____________________________________________________________
consensus             ACCCTTTGCCAGTCGCCCTATTAAGTCGAGACCCATTTCCATACTTCCTATCTACGGGGC
 
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JMSF020P17+           TAAAAAAGTACCACTCTAAATCTCTGTTCTTTAGGGATGAATATTCAGCAAGCTCCCAGG
                      ____________________________________________________________
consensus             TAAAAAAGTACCACTCTAAATCTCTGTTCTTTAGGGATGAATATTCAGCAAGCTCCCAGG
 
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JMSF020P17+           GTTCAGATTTGTAGACATCAATCTCAGAGACGGCCTGAAAGCGGAAGGGCTTCCCACAGG
                      ____________________________________________________________
consensus             GTTCAGATTTGTAGACATCAATCTCAGAGACGGCCTGAAAGCGGAAGGGCTTCCCACAGG
 
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JMSF020P17+           CCTTTCGCCGGAGGTAGTACCTAACGAGCTCCTCATCCGTCGGGTGGAACCTGAAGCCAG
JMFS160H02+                                                                AAGCCAG
                      ____________________________________________________________
consensus             CCTTTCGCCGGAGGTAGTACCTAACGAGCTCCTCATCCGTCGGGTGGAACCTGAAGCCAG
 
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JMSF020P17+           GAGCCAGCGACGTCGGCGGCGCCACGGCCCGTTTGGGAATCGCCGGCGCCACCACTCCTG
JMFS160H02+           GAGCCAGCGACGTCGGCGGCGCCACGGCCCGTTTGGGAATCGCCGGCGCCACCACTCCTG
                      ____________________________________________________________
consensus             GAGCCAGCGACGTCGGCGGCGCCACGGCCCGTTTGGGAATCGCCGGCGCCACCACTCCTG
 
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JMSF020P17+           CTCCGTCTTGCGGCGGTTGTAGCTCCATCGCTTCCCTAATCAGACAAGAACCCAGTCCCA
JMFS160H02+           CTCCGTCTTGCGGCGGTTGTAGCTCCATCGCTTCCCTAATCAGACAAGAACCCAGTCCCA
                      ____________________________________________________________
consensus             CTCCGTCTTGCGGCGGTTGTAGCTCCATCGCTTCCCTAATCAGACAAGAACCCAGTCCCA
 
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JMSF020P17+           CAAGAAAAACCGAT                                              
JMFS160H02+           CAAGAAAAACCGATAAACACACATAGATAGATAGATAGATAAATAGAGAAAGAGGGTGTG
                      ____________________________________________________________
consensus             CAAGAAAAACCGATAAACACACATAGATAGATAGATAGATAAATAGAGAAAGAGGGTGTG
 
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JMFS160H02+           AGAGAGAGGGAGGGAGTTAGGTTGAAGAAGATTAGAAGTGAAGCAAAGCTGGAAGGCACA
                      ____________________________________________________________
consensus             AGAGAGAGGGAGGGAGTTAGGTTGAAGAAGATTAGAAGTGAAGCAAAGCTGGAAGGCACA
 
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JMFS160H02+           TAGAGTATTGGTGTGTGGTTTGATAATGGCGAAATGTTTAGAGAGAGAAAGAGTGAGGAG
                      ____________________________________________________________
consensus             TAGAGTATTGGTGTGTGGTTTGATAATGGCGAAATGTTTAGAGAGAGAAAGAGTGAGGAG
 
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JMFS160H02+           GAGGAGTTATAGCCCATGGGTTAAGCAATGTGAGATAGATAGGAATGGATGCTTGCTTGA
                      ____________________________________________________________
consensus             GAGGAGTTATAGCCCATGGGTTAAGCAATGTGAGATAGATAGGAATGGATGCTTGCTTGA
 
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JMFS160H02+           CACGGAAATCGAAAAGCAGAAAAAATGAATTTCACAACGCCATTGCCATTTGCCATTTGC
                      ____________________________________________________________
consensus             CACGGAAATCGAAAAGCAGAAAAAATGAATTTCACAACGCCATTGCCATTTGCCATTTGC