Contig 011853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS149B10Sequence465011853 (2)ref|XP_009599669.1|3e-29PREDICTED: ATP-dependent RNA helicase DHX36-like [Nicotiana tomentosiformis]
JMFS166C11Sequence615011853 (2)ref|XP_009599669.1|3e-69PREDICTED: ATP-dependent RNA helicase DHX36-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS166C11+ AGCATTAGATGATACATTGGCAGTATATGAGTGTGTAG
                      ____________________________________________________________
consensus AGCATTAGATGATACATTGGCAGTATATGAGTGTGTAG
 
. : . : . : . : . : . :
JMFS166C11+ AAGAGGAATTTCCATCAGACACAGATGCTTGTGAACTGCTCAATAGATTTCCAACTTTTC
                      ____________________________________________________________
consensus AAGAGGAATTTCCATCAGACACAGATGCTTGTGAACTGCTCAATAGATTTCCAACTTTTC
 
. : . : . : . : . : . :
JMFS166C11+ TCTCAATCTCCGTAGACATTCGTATCACCTCCTGTGTTGATCCATGGCGCTCATCAAGAT
                      ____________________________________________________________
consensus TCTCAATCTCCGTAGACATTCGTATCACCTCCTGTGTTGATCCATGGCGCTCATCAAGAT
 
. : . : . : . : . : . :
JMFS166C11+ CTGCCCGGTAATTAGGTAATGGAACTTTGCTCACAACAAGTGCCTTACCCTTGTTATACG
                      ____________________________________________________________
consensus CTGCCCGGTAATTAGGTAATGGAACTTTGCTCACAACAAGTGCCTTACCCTTGTTATACG
 
. : . : . : . : . : . :
JMFS166C11+ CATGAAAGTGAAGTCCGAAATGATATGCCATATCAGACAACTTTCCCTGATCATCCCTGC
JMFS149B10+ CGAAATGATATGCCATATCAGACAACTTTCCCTGATCATCCCTGG
                      ____________________________________________________________
consensus CATGAAAGTGAAGTCCGAAATGATATGCCATATCAGACAACTTTCCCTGATCATCCCTGG
 
. : . : . : . : . : . :
JMFS166C11+ TAAAGTTTCTCTTAATTATCATCTCCTGCTCTCCTCCTCTCTTGAACTGCTCAATTTTTC
JMFS149B10+ TAAAGTTTCTCTTAATTATCATCTCATGCTCTCCTCCTCTCTTGAACTGCTCAATTTTTC
                      ____________________________________________________________
consensus TAAAGTTTCTCTTAATTATCATCTCCTGCTCTCCTCCTCTCTTGAACTGCTCAATTTTTC
 
. : . : . : . : . : . :
JMFS166C11+ CCAACCACTCATTCTCGTTCATTACCTCCATCTCGGCAGCTTTCTGACGAAGACGCTCAG
JMFS149B10+ CCAACCACTCATTCTCGTTCATTACCTCCATCTCGGCAGCTTTCTGACGAAGACGCTCAG
                      ____________________________________________________________
consensus CCAACCACTCATTCTCGTTCATTACCTCCATCTCGGCAGCTTTCTGACGAAGACGCTCAG
 
. : . : . : . : . : . :
JMFS166C11+ CTCGCCAGGCGGGGTCCCACCAGCGCTGCTCCCCACCTCGCCCTCCGCCACGGCCGCCCC
JMFS149B10+ CTCGCCAGGCGGGGTCCCACCAGCGCTGCTCCCCACCTCGCCCTCCGCCACGGCCGCCCC
                      ____________________________________________________________
consensus CTCGCCAGGCGGGGTCCCACCAGCGCTGCTCCCCACCTCGCCCTCCGCCACGGCCGCCCC
 
. : . : . : . : . : . :
JMFS166C11+ CACCCCCGGCACCTCGCCCTCCTCCACCACCACCGCTGCGGCCGCGGCCAGCGCCGCCGC
JMFS149B10+ CACCCCCGGCACCTCGCCCTCCTCCACCACCACCGCTGCGGCCGCGGCCAGCGCCGCCGC
                      ____________________________________________________________
consensus CACCCCCGGCACCTCGCCCTCCTCCACCACCACCGCTGCGGCCGCGGCCAGCGCCGCCGC
 
. : . : . : . : . : . :
JMFS166C11+ GACGGCCACCTTGGTAGTTGGGACGATTGGACATGGCTAAGGTCGGTACCCGACGACTAC
JMFS149B10+ GACGGCCACCTTGGTAGTTGGGACGATTGGACATGGCTAAGGTCGGTACCCGACGACTAC
                      ____________________________________________________________
consensus GACGGCCACCTTGGTAGTTGGGACGATTGGACATGGCTAAGGTCGGTACCCGACGACTAC
 
. : . : . : . : . : . :
JMFS166C11+ AGAGATTGTAGTTGCAGTTGCTTCGCGTAACTGAAAG
JMFS149B10+ AGAGATTGTAGTTGCAGTTGCTTCGCGTAACTGAAAGCGGCTTGTACAAACGGAACTGAA
                      ____________________________________________________________
consensus AGAGATTGTAGTTGCAGTTGCTTCGCGTAACTGAAAGCGGCTTGTACAAACGGAACTGAA
 
. : . : . : . : . : . :
JMFS149B10+ AGGAAGTCGGACAGTAGAAGAGAAGTCGCAGTGACATTTATATGGCACACGTGCGAAGCA
                      ____________________________________________________________
consensus AGGAAGTCGGACAGTAGAAGAGAAGTCGCAGTGACATTTATATGGCACACGTGCGAAGCA