| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027B17 | Sequence | 567 | 011850 (10) | ref|XP_009799603.1| | 6e-73 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | 717 | 004041 (3) | emb|CDP07776.1| | 3e-47 | unnamed protein product [Coffea canephora] |
| JMFF036F23 | Sequence | 523 | 011850 (10) | ref|XP_009799603.1| | 2e-63 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | 666 | 004041 (3) | emb|CDP07776.1| | 3e-38 | unnamed protein product [Coffea canephora] |
| JMFS020C08 | Sequence | 642 | 011850 (10) | ref|XP_009799603.1| | 5e-13 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS022G08 | Sequence | 627 | 011850 (10) | ref|XP_009799603.1| | 6e-09 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS024C08 | Sequence | 600 | 011850 (10) | ref|XP_009799603.1| | 4e-13 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS140B02 | Sequence | 626 | 011850 (10) | ref|XP_009799603.1| | 7e-17 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS142G12 | Sequence | 613 | 011850 (10) | ref|XP_009799603.1| | 2e-06 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMSF004E03 | Sequence | 201 | 011850 (10) | ||||||||
| JMSF024I23 | Sequence | 646 | 011850 (10) | ref|XP_009799603.1| | 3e-86 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMSF039D19 | Sequence | 208 | 011850 (10) | 735 | 004041 (3) | emb|CDP07776.1| | 2e-52 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMSF024I23+ CCCAACTGATCCATCAGAAATATTGTTCAAAAGCAGTTCTTCAAGAGAAGCTCTAGCACC
____________________________________________________________
consensus CCCAACTGATCCATCAGAAATATTGTTCAAAAGCAGTTCTTCAAGAGAAGCTCTAGCACC
. : . : . : . : . : . :
JMSF024I23+ TGGAAACTTGGGAGGAACAACAATTACATCAGCTGGCTGCTGACCATTAGCATCCTCGAT
JMFF027B17+ AATTACATCAGCTGGCTGCTGACCATTAGCATCCTCGAT
____________________________________________________________
consensus TGGAAACTTGGGAGGAACAACAATTACATCAGCTGGCTGCTGACCATTAGCATCCTCGAT
. : . : . : . : . : . :
JMSF024I23+ ATTGGGATCAGCCCCAGCAGAAAGTAGCAATTTGACCACTTGAGCAGCATGAACAGACCC
JMFF027B17+ ATTGGGATCAGCCCCAGCAGAAAGTAGCAATTTGACCACTTGAGCAGCATGAACAGACCC
JMFF036F23+ GATCAGCCCCAGCAGAAAGTAGCAATTTGACCACTTGAGCAGCATGAACAGACCC
____________________________________________________________
consensus ATTGGGATCAGCCCCAGCAGAAAGTAGCAATTTGACCACTTGAGCAGCATGAACAGACCC
. : . : . : . : . : . :
JMSF024I23+ ACCCGACGTAGCACGGTGAAGAGCTGTGCACTTGTCAGGGCCACAAGCTCTATTAACATC
JMFF027B17+ ACCCGACGTAGCACAGTGAAGAGCTGTGCACTTGTCAGGGCCACAAGCTCTATTAACATC
JMFF036F23+ ACCCGACGTAGCACAGTGAAGAGCTGTGCACTTGTCAGGGCCACAAGCTCTATTAACATC
____________________________________________________________
consensus ACCCGACGTAGCACAGTGAAGAGCTGTGCACTTGTCAGGGCCACAAGCTCTATTAACATC
. : . : . : . : . : . :
JMSF024I23+ AACCTCAGGAAGAGAGATAAGAAACTTCAAGACATCAATACTACCATACATGGCAGCAAC
JMFF027B17+ AACCTCAGGAAGAGAGATAAGAAACTTCAAGACATCAATACTACCATACATGGCAGCAAC
JMFF036F23+ AACCTCAGGAAGAGAGATAAGAAACTTCAAGACATCAATACTACCATACATGGCAGCAAC
____________________________________________________________
consensus AACCTCAGGAAGAGAGATAAGAAACTTCAAGACATCAATACTACCATACATGGCAGCAAC
. : . : . : . : . : . :
JMSF024I23+ CATCAACGGACTCCTTTCCTCCTTAACAATCTGCTTTGCACCTTTCTTCCGCACTAACCA
JMFF027B17+ CATCAACGGACTCCTTTCCTCCTTAACAATCTGCTTTGCACCTTTCTTCCGCACTAACCA
JMFF036F23+ CATCAACGGACTCCTTTCCTCCTTAACAATCTGCTTTGCACCTTTCTTCCGCACTAACCA
JMFS140B02+ AACCA
____________________________________________________________
consensus CATCAACGGACTCCTTTCCTCCTTAACAATCTGCTTTGCACCTTTCTTCCGCACTAACCA
. : . : . : . : . : . :
JMSF024I23+ AATCCCAACCTCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFF027B17+ AATCCCAACCTCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFF036F23+ AATCCCAACCTCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFS024C08+ TCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFS140B02+ AATCCCAACCTCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFS022G08+ CATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFS020C08+ ATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
JMFS142G12+ AACCATCCAA
____________________________________________________________
consensus AATCCCAACCTCATCAACTGCAGAACCATCACGCTCAACACATCGCTTAAAACCATCCAA
. : . : . : . : . : . :
JMSF024I23+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFF027B17+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFF036F23+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFS024C08+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFS140B02+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFS022G08+ TCATTTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFS020C08+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
JMFS142G12+ ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
____________________________________________________________
consensus ATCATTGTTGGCAGCAAGTTCAAGCAAACTCGAAAAAGAATCATCAGTCTCAACACTCAG
. : . : . : . : . : . :
JMSF024I23+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFF027B17+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFF036F23+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFS024C08+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFS140B02+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFS022G08+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFS020C08+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
JMFS142G12+ CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
____________________________________________________________
consensus CTTGCTCATGTCCTTCATATTATCAGAGTTAGACCAATCGGTAGACAAATTATACTTGGA
. : . : . : . : . : . :
JMSF024I23+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAA
JMFF027B17+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAA
JMFF036F23+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAA
JMFS024C08+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
JMFS140B02+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
JMFS022G08+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
JMFS020C08+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
JMFS142G12+ TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
____________________________________________________________
consensus TTGCTCCGGGCCACCGGACATGCTTCTTCAGTAAACAATCATCAAGGCGCATCTTTTCAT
. : . : . : . : . : . :
JMFS024C08+ AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
JMFS140B02+ AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
JMFS022G08+ AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
JMFS020C08+ AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
JMFS142G12+ AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
____________________________________________________________
consensus AGATCCGCGGAGACAGACCGGAGAAAGCAGTTGGTTTTCCGTTCTCATTTCATCGACCTC
. : . : . : . : . : . :
JMFS024C08+ CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
JMFS140B02+ CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
JMFS022G08+ CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
JMFS020C08+ CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
JMFS142G12+ CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
____________________________________________________________
consensus CGGCGGTAGATATGTATGCAGAGGTAGAGAGAGAAAAGCGACCGGAGCCAATCGGAGCTT
. : . : . : . : . : . :
JMFS024C08+ CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
JMFS140B02+ CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
JMFS022G08+ CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
JMFS020C08+ CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
JMFS142G12+ CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
____________________________________________________________
consensus CGCTTCCTAAGTGGATCATCTCCATGGTTGCTCACTCACTCCAACTCCGACAACGATTGA
. : . : . : . : . : . :
JMFS024C08+ GCGAACGATTTTTTTTTTTTTATAAATAAATTATATATCTACCATT-AAAAAAAAGTATA
JMFS140B02+ GCGAACGATTTTTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
JMFS022G08+ GCGAACGATTTTTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
JMSF039D19+ TTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
JMSF004E03+ TTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
JMFS020C08+ GCGAACGA-TTTTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
JMFS142G12+ GCGAACGATTTTTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
____________________________________________________________
consensus GCGAACGATTTTTTTTTTTTTATAAATAAATTATATATCTACCATTAAAAAAAAAGTATA
. : . : . : . : . : . :
JMFS024C08+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMFS140B02+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMFS022G08+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMSF039D19+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMSF004E03+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMFS020C08+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
JMFS142G12+ AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
____________________________________________________________
consensus AATAAATTCTAGTCTAGTCTAGCTCAAATATATGTGGATATATATATAAAAATACTCTCT
. : . : . : . : . : . :
JMFS024C08+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMFS140B02+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMFS022G08+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMSF039D19+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMSF004E03+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMFS020C08+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
JMFS142G12+ ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
____________________________________________________________
consensus ATATATACAATGCGGACATGTATGTATATGTGGAGAGAGAAAATATAGCGAGAGGGAAAG
. : . : . : . : . : . :
JMFS024C08+ ATCTAGAGAAA
JMFS140B02+ ATCTAGAGAAAGTGAAAGGCA
JMFS022G08+ ATCTAGAGAAAGTGAAAGGCAGGCATGCTGTGAGAGAGAGAGAGAGAGAGTTG
JMSF039D19+ ATCTAGAGAAAGTGAAAGGCAGGCATGCTGTGAGAGAG
JMSF004E03+ ATCTAGAGAAAGTGAAAGGCAGGCATGCTG
JMFS020C08+ ATCTAGAGAAAGTGAAAGGCAGGCATGCTGTGAGAGAGAGAGAGAGAGAGTTG
JMFS142G12+ ATCTAGAGAAAGTGAAAGGCAGGCATGCTGTGAGAGAGAGAGAGAGAGAGTTGAGAGTGA
____________________________________________________________
consensus ATCTAGAGAAAGTGAAAGGCAGGCATGCTGTGAGAGAGAGAGAGAGAGAGTTGAGAGTGA