Contig 011846:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS024H03Sequence604011846 (4)emb|CDO98363.1|2e-28unnamed protein product [Coffea canephora]
JMFS087D05Sequence619011846 (4)emb|CDO98363.1|3e-12unnamed protein product [Coffea canephora]
JMFS102B05Sequence600011846 (4)emb|CDO98363.1|2e-21unnamed protein product [Coffea canephora]
JMFS136D08Sequence590011846 (4)

Alignment

This contig is upended


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JMFS024H03+                GCAGCCTCCAAGCCAGAACTACTCAAAGAATCAGAAGGTTCCATTATGTCAACTC
                      ____________________________________________________________
consensus                  GCAGCCTCCAAGCCAGAACTACTCAAAGAATCAGAAGGTTCCATTATGTCAACTC
 
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JMFS024H03+           TATTCACATTAGAAGAAGGAGGACTAGGACTACTATGTCTACTTGTAACAGAGCTTAGCC
JMFS102B05+                                                              AGCTTAGCC
                      ____________________________________________________________
consensus             TATTCACATTAGAAGAAGGAGGACTAGGACTACTATGTCTACTTGTAACAGAGCTTAGCC
 
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JMFS024H03+           ATCCAGAAATTGCTGAAAAGGGCTTGTTATGCTCAGACCCATGGTGGGATCTAGAGTTTA
JMFS102B05+           ATCCAGAAATTGCTGAAAAGGGCTTGTTATGCTCAGACCCATGGTGGGATCTAGAGTTTA
JMFS087D05+                                            CAGACCCATGGTGGGATCTAGAGTTTA
                      ____________________________________________________________
consensus             ATCCAGAAATTGCTGAAAAGGGCTTGTTATGCTCAGACCCATGGTGGGATCTAGAGTTTA
 
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JMFS024H03+           AATTCCTTTCAGGCGAAGAAACATCACTCAACCTATTCCCCTTTGCTGCTGATGTTGACC
JMFS102B05+           AATTCCTTTCAGGCGAAGAAACATCACTCAACCTATTCCCCTTTGCTGCTGATGTTGACC
JMFS087D05+           AATTCCTTTCAGGCGAAGAAACATCACTCAACCTATTCCCCTTTGCTGCTGATGTTGACC
                      ____________________________________________________________
consensus             AATTCCTTTCAGGCGAAGAAACATCACTCAACCTATTCCCCTTTGCTGCTGATGTTGACC
 
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JMFS024H03+           CTTCTGAATCCTCAGACTGATTGGACCCCAAATGGAGTTTCTTCAAAAAGTTTTTCATAT
JMFS102B05+           CTTCTGAATCCTCAGACTGATTGGACCCCAAATGGAGTTTCTTCAAAAAGTTTTTCATAT
JMFS087D05+           CTTCTGAATCCTCAGACTGATTGGACCCCAAATGGAGTTTCTTCAAAAAGTTTTTCATAT
JMFS136D08+                     CTCAGACTGATTGGACCCCAAATGGAGTTTCTTCAAAAAGTTTTTCATAT
                      ____________________________________________________________
consensus             CTTCTGAATCCTCAGACTGATTGGACCCCAAATGGAGTTTCTTCAAAAAGTTTTTCATAT
 
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JMFS024H03+           TGTTTCCACTAGTCAATGCTAAAGAAGATGAAACCTCTCCATTGTCTCACTCCAAGCATG
JMFS102B05+           TGTTTCCACTAGTCAATGCTAAAGAAGATGAAACCTCTCCATTGTCTCACTCCAAGCATG
JMFS087D05+           TGTTTCCACTAGTCAATGCTAAAGAAGATGAAACCTCTCCATTGTCTCACTCCAAGCATG
JMFS136D08+           TGTTTCCACTAGTCAATGCTAAAGAAGATGAAACCTCTCCATTGTCTCACTCCAAGCATG
                      ____________________________________________________________
consensus             TGTTTCCACTAGTCAATGCTAAAGAAGATGAAACCTCTCCATTGTCTCACTCCAAGCATG
 
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JMFS024H03+           AACCAATCCCTCCCCAAAACAATCAACTCCACTCCAACAATGACAATAAAGTCGAAATTT
JMFS102B05+           AACCAATCCCTCCCCAAAACAATCAACTCCACTCCAACAATGACAATAAAGTCGAAATTT
JMFS087D05+           AACCAATCCCTCCCCAAAACAATCAACTCCACTCCAACAATGACAATAAAGTCGAAATTT
JMFS136D08+           AACCAATCCCTCCCCAAAACAATCAACTCCACTCCAACAATGACAATAAAGTCGAAATTT
                      ____________________________________________________________
consensus             AACCAATCCCTCCCCAAAACAATCAACTCCACTCCAACAATGACAATAAAGTCGAAATTT
 
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JMFS024H03+           CAAAACAACCCAACAAGGCCCTCTTTAGGTCAACATCCAATAAACCTCAAACAGACCAAT
JMFS102B05+           CAAAACAACCCAACAAGGCCCTCTTTAGGTCAACATCCAATAAACCTCAAACAGACCAAT
JMFS087D05+           CAAAACAACCCAACAAGGCCCTCTTTAGGTCAACATCCAATAAACCTCAAACAGACCAAT
JMFS136D08+           CAAAACAACCCAACAAGGCCCTCTTTAGGTCAACATCCAATAAACCTCAAACAGACCAAT
                      ____________________________________________________________
consensus             CAAAACAACCCAACAAGGCCCTCTTTAGGTCAACATCCAATAAACCTCAAACAGACCAAT
 
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JMFS024H03+           CAAACCCCATAGCCAAACCAAACTCTGCTCCTTTATAAAATGCCCAGATGCAGAAATAGA
JMFS102B05+           CAAACCCCATAGCCAAACCAAACTCTGCTCCTTTATAAAATGCCCAGATGCAGAAATAGA
JMFS087D05+           CAAACCCCATAGCCAAACCAAACTCTGCTCCTTTATAAAATGCCCAGATGCAGAAATAGA
JMFS136D08+           CAAACCCCATAGCCAAACCAAACTCTGCTCCTTTATAAAATGCCCAGATGCAGAAATAGA
                      ____________________________________________________________
consensus             CAAACCCCATAGCCAAACCAAACTCTGCTCCTTTATAAAATGCCCAGATGCAGAAATAGA
 
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JMFS024H03+           AAGGCAAAACAAAAAAATCCAATTCAAGAATGCAAATCAAACGCAGTCACACACGTTTTT
JMFS102B05+           AAGGCAAAACAAAAAAATCCAATTCAAGAATGCAAATCAAACGCAGTCACACACGTTTTT
JMFS087D05+           AAGGCAAAACAAAAAAATCCAATTCAAGAATGCAAATCAAACGCAGTCACACACGTTTTT
JMFS136D08+           AAGGCAAAACAAAAAAATCCAATTCAAGAATGCAAATCAAACGCAGTCACACACGTTTTT
                      ____________________________________________________________
consensus             AAGGCAAAACAAAAAAATCCAATTCAAGAATGCAAATCAAACGCAGTCACACACGTTTTT
 
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JMFS024H03+           ATGTCTGCA                                                   
JMFS102B05+           ATGTCTGCACAGCACACACACCCAAAACAATCAAGAATCGAGAAAAAGGTGGCTTTTTTA
JMFS087D05+           ATGTCTGCACAGCACACACACCCAAAACAATCAAGAATCGAGAAAAAGGTGGCTTTTTTA
JMFS136D08+           ATGTCTGCACAGCACACACACCCAAAACAATCAAGAATCGAGAAAAAGGTGGCTTTTTTA
                      ____________________________________________________________
consensus             ATGTCTGCACAGCACACACACCCAAAACAATCAAGAATCGAGAAAAAGGTGGCTTTTTTA
 
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JMFS102B05+           TTGTATTACCTTAACAGAAACAACAGCCAATCAACAAGGGAGTTGAATAAT         
JMFS087D05+           TTGTATTACCTTAACAGAAACAACAGCCAATCAACAAGGGAGTTGAATAATAAAAACACC
JMFS136D08+           TTGTATTACCTTAACAGAAACAACAGCCAATCAACAAGGGAGTTGAATAATAAAAACACC
                      ____________________________________________________________
consensus             TTGTATTACCTTAACAGAAACAACAGCCAATCAACAAGGGAGTTGAATAATAAAAACACC
 
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JMFS087D05+           AATATAGTGGATTGCGTGAAGAAAGAGAGGGATTGGGGCTTTATTGCATTGA        
JMFS136D08+           AATATAGTGGATTGCGTGAAGAAAGAGAGGGATTGGGGCTTTATTGCATTGAGATAGAGA
                      ____________________________________________________________
consensus             AATATAGTGGATTGCGTGAAGAAAGAGAGGGATTGGGGCTTTATTGCATTGAGATAGAGA
 
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JMFS136D08+           AGAAAGACTATTATTTCATATTCAAAAAGAAAATGTAATAAAAGTAAAAAGGGGGTGAGT
                      ____________________________________________________________
consensus             AGAAAGACTATTATTTCATATTCAAAAAGAAAATGTAATAAAAGTAAAAAGGGGGTGAGT