Contig 011845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS110E09Sequence611011845 (2)ref|XP_009596670.1|1e-15PREDICTED: RNA-binding protein 5 isoform X4 [Nicotiana tomentosiformis]
JMFS135H10Sequence653011845 (2)ref|XP_009596668.1|4e-34PREDICTED: RNA-binding protein 5 isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS110E09+ AGTAGCAGAAGGAG
                      ____________________________________________________________
consensus AGTAGCAGAAGGAG
 
. : . : . : . : . : . :
JMFS110E09+ CCACAGAGTAGCTGTCATGGTGTCGTCTGTCATCATGGTCCCTACGCCTTTCACTTCTAT
                      ____________________________________________________________
consensus CCACAGAGTAGCTGTCATGGTGTCGTCTGTCATCATGGTCCCTACGCCTTTCACTTCTAT
 
. : . : . : . : . : . :
JMFS110E09+ CATATCGGATATCATCATAACTGTCCTCTCTATGACTACGGCTATGACTTCGACTTCGAG
JMFS135H10+ GATATCATCATAACTGTCCTCTCTATGACTACGGCTATGACTTCGACTTCGAG
                      ____________________________________________________________
consensus CATATCGGATATCATCATAACTGTCCTCTCTATGACTACGGCTATGACTTCGACTTCGAG
 
. : . : . : . : . : . :
JMFS110E09+ GAGACCTTGACCTCAGGCGATCATCACGATCGCGAGACCGTGAACGGGAACGCTCATGCC
JMFS135H10+ GAGACCTTGACCTCAGGCGATCATCACGATCGCGAGACCGTGAACGGGAACGCTCATGCC
                      ____________________________________________________________
consensus GAGACCTTGACCTCAGGCGATCATCACGATCGCGAGACCGTGAACGGGAACGCTCATGCC
 
. : . : . : . : . : . :
JMFS110E09+ TTGTATATGGACTGTGATCTCTTTCCCGGCTTGAGGCTCTCCTATCATGCTCACGATCAC
JMFS135H10+ TTGTATATGGACTGTGATCTCTTTCCCGGCTTGAGGCTCTCCTATCATGCTCACGATCAC
                      ____________________________________________________________
consensus TTGTATATGGACTGTGATCTCTTTCCCGGCTTGAGGCTCTCCTATCATGCTCACGATCAC
 
. : . : . : . : . : . :
JMFS110E09+ GGGAATCACGCCGTCTCCAGTTACTGTCTCTCCTACTGCCTCTGTCATAGTCAGAATCAT
JMFS135H10+ GGGAATCACGCCGTCTCCAGTTACTGTCTCTCCTACTGCCTCTGTCATAGTCAGAATCAT
                      ____________________________________________________________
consensus GGGAATCACGCCGTCTCCAGTTACTGTCTCTCCTACTGCCTCTGTCATAGTCAGAATCAT
 
. : . : . : . : . : . :
JMFS110E09+ AACTGTGTCTACCATAATCATAGTCCCTTTAATGGCTATCTTCCCTGCTTTGATGAGAAA
JMFS135H10+ AACTGTGTCTACCATAATCATAGTCCCTTTCATGGCTATCTTCCCTGCTTTGATGAGAAA
                      ____________________________________________________________
consensus AACTGTGTCTACCATAATCATAGTCCCTTTCATGGCTATCTTCCCTGCTTTGATGAGAAA
 
. : . : . : . : . : . :
JMFS110E09+ CGCGATGGCGATAATCATAATGCTCATAAGCATAATCATCTCTGTCACGTCCTCCATACC
JMFS135H10+ CGCGATGGCGATAATCATAATGCTCATAAGCATAATCATCTCTGTCACGTCCTCCATACC
                      ____________________________________________________________
consensus CGCGATGGCGATAATCATAATGCTCATAAGCATAATCATCTCTGTCACGTCCTCCATACC
 
. : . : . : . : . : . :
JMFS110E09+ TGGTGGGC
JMFS135H10+ TGGTGGGCCTGCCAAATCCAAGATCATGGTTGTTGTCAAACTGTGATGACCACCCTGAAT
                      ____________________________________________________________
consensus TGGTGGGCCTGCCAAATCCAAGATCATGGTTGTTGTCAAACTGTGATGACCACCCTGAAT
 
. : . : . : . : . : . :
JMFS135H10+ ACACTAATCTCGTGATACTTATCAGCTTCAAGAAAAGAATCTGTTTAATGATATAAATCA
                      ____________________________________________________________
consensus ACACTAATCTCGTGATACTTATCAGCTTCAAGAAAAGAATCTGTTTAATGATATAAATCA
 
. : . : . : . : . : . :
JMFS135H10+ ACATACATCTTCTCATTCCTCCTGGAATCCCTATCCAGTGGATATTCTTCTTCATAACTT
                      ____________________________________________________________
consensus ACATACATCTTCTCATTCCTCCTGGAATCCCTATCCAGTGGATATTCTTCTTCATAACTT
 
. : . : . : . : . : . :
JMFS135H10+ CTTCTCCTTGTTGGAGCCCACAATCCAACTGGTGGTGGTGGATGTGGGTACTGCTCCCTC
                      ____________________________________________________________
consensus CTTCTCCTTGTTGGAGCCCACAATCCAACTGGTGGTGGTGGATGTGGGTACTGCTCCCTC
 
. : . : . : . : . : . :
JMFS135H10+ TCCAGAATATCACGGTGAAACCCACTCCTAGGGTAAATATTCTCTCTCCCTCGTGCCGAA
                      ____________________________________________________________
consensus TCCAGAATATCACGGTGAAACCCACTCCTAGGGTAAATATTCTCTCTCCCTCGTGCCGAA