| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS023D01 | Sequence | 514 | 011842 (9) | ref|XP_007034285.1| | 4e-70 | Sucrose phosphate synthase 3F isoform 5 [Theobroma cacao] gb|EOY05211.1| Sucrose | |||||
| JMFS029G04 | Sequence | 624 | 011842 (9) | emb|CDP11144.1| | 1e-78 | unnamed protein product [Coffea canephora] | |||||
| JMFS063A03 | Sequence | 642 | 011842 (9) | emb|CDP11144.1| | 4e-113 | unnamed protein product [Coffea canephora] | |||||
| JMFS084F08 | Sequence | 613 | 011842 (9) | emb|CDP11144.1| | 3e-78 | unnamed protein product [Coffea canephora] | |||||
| JMFS131A10 | Sequence | 599 | 011842 (9) | gb|KDP39346.1| | 2e-61 | hypothetical protein JCGZ_01103 [Jatropha curcas] | |||||
| JMFS135D01 | Sequence | 608 | 011842 (9) | emb|CDP11144.1| | 2e-71 | unnamed protein product [Coffea canephora] | |||||
| JMFS141F07 | Sequence | 626 | 011842 (9) | emb|CDP11144.1| | 3e-80 | unnamed protein product [Coffea canephora] | |||||
| JMFS146A05 | Sequence | 635 | 011842 (9) | emb|CDP11144.1| | 2e-82 | unnamed protein product [Coffea canephora] | |||||
| JMFS153E06 | Sequence | 624 | 011842 (9) | gb|ABK29438.1| | 2e-112 | sucrose phosphate synthase [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS153E06+ CGAGCTTTAC
____________________________________________________________
consensus CGAGCTTTAC
. : . : . : . : . : . :
JMFS153E06+ ATCGAACCCATCATATAGCCCCCATTGCTCATCAATTTCTTGTCGAGTGCTGGTGATAAC
____________________________________________________________
consensus ATCGAACCCATCATATAGCCCCCATTGCTCATCAATTTCTTGTCGAGTGCTGGTGATAAC
. : . : . : . : . : . :
JMFS153E06+ AAGTTCTGCTGCATCGAGTGAAAGCTCTTCTGCCTCTATCCTCCGCATGATCTTATAGGT
____________________________________________________________
consensus AAGTTCTGCTGCATCGAGTGAAAGCTCTTCTGCCTCTATCCTCCGCATGATCTTATAGGT
. : . : . : . : . : . :
JMFS153E06+ CGAATTAATATCCTCCTTCGATTGCCTCCCCTGTTTCAGGAGCTGTTCAAGCTTGTTTCT
____________________________________________________________
consensus CGAATTAATATCCTCCTTCGATTGCCTCCCCTGTTTCAGGAGCTGTTCAAGCTTGTTTCT
. : . : . : . : . : . :
JMFS153E06+ ACCCAGCGAGTGTCCAGTTAGAACCATCGGAACATTTAAAGCACCCGAAAGAAGAGCAGC
____________________________________________________________
consensus ACCCAGCGAGTGTCCAGTTAGAACCATCGGAACATTTAAAGCACCCGAAAGAAGAGCAGC
. : . : . : . : . : . :
JMFS153E06+ ACTATCCCCAGCATCAGCATAATGGCCATGGATCACGTAAGGCCAAACGGGTTGCCCATC
____________________________________________________________
consensus ACTATCCCCAGCATCAGCATAATGGCCATGGATCACGTAAGGCCAAACGGGTTGCCCATC
. : . : . : . : . : . :
JMFS153E06+ CCCGATTTGTTCACTTAAAGTCTTGGACATATTCAGGATGTGTGCTAGAGCTCCATCTAC
____________________________________________________________
consensus CCCGATTTGTTCACTTAAAGTCTTGGACATATTCAGGATGTGTGCTAGAGCTCCATCTAC
. : . : . : . : . : . :
JMFS153E06+ AAACTCTTGAATGTGAGGCCACAATAGCTCTTTCCTTTGGTACTTATCCCGAGGACCAAA
JMFS063A03+ GGACCAAA
____________________________________________________________
consensus AAACTCTTGAATGTGAGGCCACAATAGCTCTTTCCTTTGGTACTTATCCCGAGGACCAAA
. : . : . : . : . : . :
JMFS153E06+ GGGTATTCTTATGATATATGCCCCGCTACTTTCACCCAAAAAACCATCACCATCGCCATC
JMFS063A03+ GGGTATTCTTATGATATATGCNCCGCTACTTTCACCCAAANAACCATCACCATCGCCATC
____________________________________________________________
consensus GGGTATTCTTATGATATATGCCCCGCTACTTTCACCCAAAAAACCATCACCATCGCCATC
. : . : . : . : . : . :
JMFS153E06+ TTCAGGACCCGTATTCAACATTTCTGCAGGCTCACCATAACTCCAGTCCACTTCCGGTGA
JMFS063A03+ TTCAGGACCCGTATTCAACATTTCTGCAGGCTCACCATAACTCCAGTCCACTTCCGGTGA
____________________________________________________________
consensus TTCAGGACCCGTATTCAACATTTCTGCAGGCTCACCATAACTCCAGTCCACTTCCGGTGA
. : . : . : . : . : . :
JMFS153E06+ GGAAACTTGACGAGTGAACAGATCCACCCTGTATACACCGGGCATCTTAGCAAGCGCCTT
JMFS063A03+ GGAAACTTGACGAGTGAACAGATCCACCCTGTATACACCGGGCATCTTAGCAAGCGCCTT
____________________________________________________________
consensus GGAAACTTGACGAGTGAACAGATCCACCCTGTATACACCGGGCATCTTAGCAAGCGCCTT
. : . : . : . : . : . :
JMFS153E06+ GGCAAGTTCCACAA
JMFS063A03+ GGCAAGTTCCACAACATATTTAATCTGACCACCAGTATCAGAATCCCGACCAAGCTCCAT
____________________________________________________________
consensus GGCAAGTTCCACAACATATTTAATCTGACCACCAGTATCAGAATCCCGACCAAGCTCCAT
. : . : . : . : . : . :
JMFS063A03+ ATTTTCACCACGAACCAAACCATGCAAGCTAATAAGAACAATATAAAGCTTCCTTTCCTT
____________________________________________________________
consensus ATTTTCACCACGAACCAAACCATGCAAGCTAATAAGAACAATATAAAGCTTCCTTTCCTT
. : . : . : . : . : . :
JMFS063A03+ GTTACTTTCCGTCTCCGGCCATACTTCCAAATTGGACGAGTTTCGCTGGAACTTCTTCCT
JMFS146A05+ GTCTCCGGCCATACTTCCAAATTGGACGAGTTTCGCTGGAACTTCTTCCT
JMFS135D01+ GAGTTTCGCTGGAACTTCTTCCT
JMFS084F08+ ACGAGTTTCGCTGGAACTTCTTCCT
JMFS029G04+ TCCAAATTGGACGAGTTTCGCTGAACTTTCTTCCT
JMFS141F07+ TCCAAATTGGACGAGTTTCGCTGGAACTTCTTCCT
____________________________________________________________
consensus GTTACTTTCCGTCTCCGGCCATACTTCCAAATTGGACGAGTTTCGCTGGAACTTCTTCCT
. : . : . : . : . : . :
JMFS063A03+ CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS146A05+ CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS135D01+ CGGAC-TTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS084F08+ CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS023D01+ TCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS029G04+ CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
JMFS141F07+ CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
____________________________________________________________
consensus CGGACTTTCAAGCGATAGCGTCTCCCCCAACGCATCACCCTTCTCTCCTTCGGACAAGTC
. : . : . : . : . : . :
JMFS063A03+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS146A05+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS135D01+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS084F08+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS023D01+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS029G04+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS141F07+ TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
JMFS131A10+ TCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
____________________________________________________________
consensus TTCAGACATGTCCTCGGTCACATCTTTGCGCCCTTGCTCCCGTTCCCATCTCCTATGGGC
. : . : . : . : . : . :
JMFS063A03+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS146A05+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS135D01+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS084F08+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS023D01+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS029G04+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS141F07+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
JMFS131A10+ TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
____________________________________________________________
consensus TAACCTTTGTAAACCCTCCAATTCCAACTGTTTCTTCTTGCGGGTGAGGTGCCAGATTCG
. : . : . : . : . : . :
JMFS063A03+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS146A05+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS135D01+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS084F08+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS023D01+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS029G04+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS141F07+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
JMFS131A10+ CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
____________________________________________________________
consensus CCAGCACATGTTCTCGAGGCGAGAGCTGCGCTCCATGGTGTTGCGGGTAGCCACCACCTT
. : . : . : . : . : . :
JMFS063A03+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACG
JMFS146A05+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS135D01+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS084F08+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS023D01+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS029G04+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS141F07+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
JMFS131A10+ GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
____________________________________________________________
consensus GATCCATGTCCGGTGAAGGTCCGTCTCGTCCACGCCGGAAACCACCTCCTCCACAAAGTA
. : . : . : . : . : . :
JMFS146A05+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS135D01+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS084F08+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS023D01+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS029G04+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS141F07+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
JMFS131A10+ CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
____________________________________________________________
consensus CTTGGTGGGATTGAAATGCCCTTGTTCCCCGCGGTGGTTAATCACAGCCGGCTTGCTCTC
. : . : . : . : . : . :
JMFS146A05+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS135D01+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS084F08+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS023D01+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS029G04+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS141F07+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
JMFS131A10+ CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
____________________________________________________________
consensus CACCTCAATCGCCGACGCGCCGCTGTCCAGAATCGCCTCCAGGTACCCGTTTATCCACTC
. : . : . : . : . : . :
JMFS146A05+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS135D01+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS084F08+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS023D01+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS029G04+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS141F07+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
JMFS131A10+ ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
____________________________________________________________
consensus ATTCCCAGCCATTTTCCTCCAAATCCCAGGAAGATCAACCAACCAAAACAAAAACAAAAA
. : . : . : . : . : . :
JMFS146A05+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
JMFS135D01+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
JMFS084F08+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
JMFS023D01+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATG
JMFS029G04+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
JMFS141F07+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
JMFS131A10+ TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
____________________________________________________________
consensus TGGGTTCTTTTTCTTTTTGTTTGTTTCTTTCTGATCGAGGAGAAAGCGTGGGGATGAATG
. : . : . : . : . : . :
JMFS146A05+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGA
JMFS135D01+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGAT
JMFS084F08+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGATGT
JMFS029G04+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGATGT
JMFS141F07+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGATGT
JMFS131A10+ GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGATGTTGTGCGGTTCCC
____________________________________________________________
consensus GTTTGTATGGAGCGTTGTTAGGATTCGGTTATGGAGGAGAAGAGATGTTGTGCGGTTCCC
. : . : . : . : . : . :
JMFS131A10+ AATGCACTCTTCTTCTACGACGTACTATATATTTTTACAAAAAAAATGAGTATTCTAAAA
____________________________________________________________
consensus AATGCACTCTTCTTCTACGACGTACTATATATTTTTACAAAAAAAATGAGTATTCTAAAA