Contig 011837:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS126H10Sequence626011837 (2)ref|XP_009794563.1|5e-56PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris]
JMSF035J03Sequence622011837 (2)ref|XP_004243783.1|1e-70PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]694021529emb|CDP04904.1|2e-34unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF035J03+                                                                    AAN
                      ____________________________________________________________
consensus                                                                      AAN
 
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JMSF035J03+           TTAGTAACGATATCTTCAACAATTTTCTGGATGAACTTTGCTTCATGCCCATTTTCAGTG
                      ____________________________________________________________
consensus             TTAGTAACGATATCTTCAACAATTTTCTGGATGAACTTTGCTTCATGCCCATTTTCAGTG
 
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JMSF035J03+           TTGTTCAGATCCCAACCTGACAAATTGGATACATTCTCCAGCACTTTCCTCCATTTCTTC
                      ____________________________________________________________
consensus             TTGTTCAGATCCCAACCTGACAAATTGGATACATTCTCCAGCACTTTCCTCCATTTCTTC
 
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JMSF035J03+           ACCTTTTCTCCTTCTTTCTCAAACCTCTTTTCATGTCCTTCAAAGGCTTCTCCATACTTT
JMFS126H10+                                             GTCCTTCAAAGGCTTCTCCATACTTT
                      ____________________________________________________________
consensus             ACCTTTTCTCCTTCTTTCTCAAACCTCTTTTCATGTCCTTCAAAGGCTTCTCCATACTTT
 
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JMSF035J03+           TCCTTCTGTTTCCTCACAGTCGACGGATCCACGCCATAGAAAATGGGAACAACCATTTGA
JMFS126H10+           CCCTTCTGTTTCCTCACCATCGATGGATCCACGCCATAGAAAATGGGAACAACCATCTGA
                      ____________________________________________________________
consensus             TCCTTCTGTTTCCTCACCGTCGATGGATCCACGCCATAGAAAATGGGAACAACCATTTGA
 
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JMSF035J03+           CCTTTCAGCTCCATACACTCCATGATTTTCACTAGTTCCTCCAAACACCATGTGGAATCA
JMFS126H10+           CCTTTCACCTCCATACACTCCATGATTTTCACCAGTTCCTCCAAACACCATGTGGAATCA
                      ____________________________________________________________
consensus             CCTTTCAGCTCCATACACTCCATGATTTTCACTAGTTCCTCCAAACACCATGTGGAATCA
 
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JMSF035J03+           GCATAGTGCTCGGAGAAGACGACCACCGCCATGGACGATTCTTCGATTGCCTTCTCAAGT
JMFS126H10+           GCATAGTGCTCGGAGAAGACGACCACCGCCATGGACGATTCTTCGATTGCCTTCTCAAGT
                      ____________________________________________________________
consensus             GCATAGTGCTCGGAGAAGACGACCACCGCCATGGACGATTCTTCGATTGCCTTCTCAAGT
 
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JMSF035J03+           GCGGGCGAGATGGACTTTCCCCTTTCCAGCTTCTCGTCGTCTTTGAAAGTGTAAATCCCT
JMFS126H10+           GCGGGCGAGATGGACTTTCCCCTTTCCAGCTTCTCGTCGTCTTTGAAAGTGTAAATCCCT
                      ____________________________________________________________
consensus             GCGGGCGAGATGGACTTTCCCCTTTCCAGCTTCTCGTCGTCTTTGAAAGTGTAAATCCCT
 
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JMSF035J03+           CTGTGCTGCATCGCACTGTAGAGATGGTCAACGAAGTTCTTGCGGACGTCTTCTCCTCTG
JMFS126H10+           CTTTGCTACATCGCAGCGTAGAGATGGTCAACGAAGTTCTTGCGGACGTCTTCTCCTCTG
                      ____________________________________________________________
consensus             CTTTGCTGCATCGCAGTGTAGAGATGGTCAACGAAGTTCTTGCGGACGTCTTCTCCTCTG
 
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JMSF035J03+           AAACTCAAGAAAACATCATAGGAGGAACCACATGAAGACACAGAGGAAGGTTGTTCCATT
JMFS126H10+           AAACTCAAGAAAACATCATAGGAGGAACCACATGAAGACACAAAAGAAGGCTGTTCCATT
                      ____________________________________________________________
consensus             AAACTCAAGAAAACATCATAGGAGGAACCACATGAAGACACAGAGGAAGGTTGTTCCATT
 
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JMSF035J03+           GCAAT                                                       
JMFS126H10+           GCAATTGTGAAGAAAGCTATGGCCGCAAAACTGGATCTGCAGTACGAAACTTAATCCACT
                      ____________________________________________________________
consensus             GCAATTGTGAAGAAAGCTATGGCCGCAAAACTGGATCTGCAGTACGAAACTTAATCCACT
 
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JMFS126H10+           ATGCGCAATAACTAATGTGATGATGATTTCTTAATAGATAAAAGTAAACACCGGCCTGAA
                      ____________________________________________________________
consensus             ATGCGCAATAACTAATGTGATGATGATTTCTTAATAGATAAAAGTAAACACCGGCCTGAA
 
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JMFS126H10+           TTTTATAGGGCATGATTAGAGTAGTTAAGAAACAAAGAATCCATCAAACTTACTGTATAA
                      ____________________________________________________________
consensus             TTTTATAGGGCATGATTAGAGTAGTTAAGAAACAAAGAATCCATCAAACTTACTGTATAA
 
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JMFS126H10+           AAAGCTGCGCTCGCTACATTTTCTAAAGGGGTAGGTTTTGTTTCACTCAATTATTTCAAA
                      ____________________________________________________________
consensus             AAAGCTGCGCTCGCTACATTTTCTAAAGGGGTAGGTTTTGTTTCACTCAATTATTTCAAA