Contig 011832:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS006G10+                                AATTCATCACCAATCAACTGCTAATTCCAACTACCAACA
JMFS013F04+                                                                  CAACA
JMFS120B09+                                               AACTGCTAATTCCAACTACCAACA
                      ____________________________________________________________
consensus                                  AATTCATCACCAATCAACTGCTAATTCCAACTACCAACA
 
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JMFS006G10+           AAATTATAATAAAATCCCTGCAAGTTCTCTGCTTCAGATAGTCTACACTCCCAGAAAAAA
JMFS013F04+           AAATTATAATAAAATCCCTACAAGTTCTCTGCTTCAGATAGTCTACACTCCCAGAAAAAA
JMFS120B09+           AAATTATAATAAAATCCCTACAAGTTCTCTGCTTCAGATAGTCTACACTCCCAGAAAAAA
                      ____________________________________________________________
consensus             AAATTATAATAAAATCCCTACAAGTTCTCTGCTTCAGATAGTCTACACTCCCAGAAAAAA
 
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JMFS006G10+           AGATGATCACCAACATACAAAAACCATAGTCTTGGTACTCCACTGGCATGCAAATGCAAA
JMFS013F04+           AGATGATCACCAACATACAAAAACCATAGTCTTGGTACTCCACTGGCATGCAAATGCAAA
JMFS120B09+           AGATGATCACCAACATACAAAAACCATAGTCTTGGTACTCCACTGGCATGCAAATGCAAA
                      ____________________________________________________________
consensus             AGATGATCACCAACATACAAAAACCATAGTCTTGGTACTCCACTGGCATGCAAATGCAAA
 
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JMFS006G10+           ACAAAAAGATCAAACCCAAATCTGAGAACAGGCAAGACAACTAACCGGTTTCTGCATAAA
JMFS013F04+           ACAAAAAGATCAAACCCAAATCTGAGAACAGGCAAGACAACTAACCGGTTTCTGCATAAA
JMFS120B09+           ACAAAAAGATCAAACCCAAATCTGAGAACAGGCAAGACAACTAACCGGTTTCTGCATAAA
                      ____________________________________________________________
consensus             ACAAAAAGATCAAACCCAAATCTGAGAACAGGCAAGACAACTAACCGGTTTCTGCATAAA
 
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JMFS006G10+           CAGTAACTAACAAAAATACCCTCTACTCAATTCACCTCAAAAAATATCTGGAAATCCCGC
JMFS013F04+           CAGTAACTAACAAAAATACCCTCTACTCAATTCACCTCAAAAAATATCTGGAAATCCCGC
JMFS120B09+           CAGTAACTAACAAAAATACCCTCTACTCAATTCACCTCAAAAAATATCTGGAAATCCCGC
                      ____________________________________________________________
consensus             CAGTAACTAACAAAAATACCCTCTACTCAATTCACCTCAAAAAATATCTGGAAATCCCGC
 
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JMFS006G10+           AATTCATATGCGTAACAATTGAACAACCTACCCAAGGGCCGAGAACAAATAAAAATCCAA
JMFS141C04+                                                       ACAAATAAAAATCCAA
JMFS013F04+           AATTCATATGCGTAACAATTGAACAACCTACCCAAGGGCCGAGAACAAATAAAAATCCAA
JMFS120B09+           AATTCATATGCGTAACAATTGAACAACCTACCCAAGGGCCGAGAACAAATAAAAATCCAA
                      ____________________________________________________________
consensus             AATTCATATGCGTAACAATTGAACAACCTACCCAAGGGCCGAGAACAAATAAAAATCCAA
 
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JMFS006G10+           TCTT                                                        
JMFS141C04+           TCTTTCCTAGAATAAGTGATCTGAATTGGTGAGAAGCAGCTGAATATTAGTAGAACGAAA
JMFS013F04+           TCTTTCCTAGAATAAGTGATCTGAATTACTGAGAAGCAGCTGAATATTAGTAAAACGAAA
JMFS120B09+           TCTTTCCTAGAATAAGTGATCTGAATTACTGAGAAGCAGCTGAATATTAGTAAAACGAAA
                      ____________________________________________________________
consensus             TCTTTCCTAGAATAAGTGATCTGAATTACTGAGAAGCAGCTGAATATTAGTAAAACGAAA
 
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JMFS141C04+           AACGGGCACTTGAATTGAGCATTGATAAGTACATGGGGGGAGTGAAGCCGAGGAAACAGA
JMFS013F04+           AACGGGCACTTGAATTGAGCATTGATAAGTACATGGGGGGAGTGAAGCCGAGGAAACAGA
JMFS120B09+           AACGGGCACTTGAATTGAGCATTGATAAGTACATGGGGGGAGTGAAGCCGAGGAAACAGA
                      ____________________________________________________________
consensus             AACGGGCACTTGAATTGAGCATTGATAAGTACATGGGGGGAGTGAAGCCGAGGAAACAGA
 
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JMFS141C04+           GGAGACCCAGGTGAGATACACGTTATGGGTTCTTGATTTCACGGCGGCGGATGGGCATTT
JMFS013F04+           GGAGACCCAGGTGAGATACACGTTATGGGTTCTTGATTTCACGGCGGCGGATGGGCATTT
JMFS120B09+           GGAGACCCAGGTGAGATACACGTTATGGGTTCTTGATTTCACGGCGGCGGATGGGCATTT
                      ____________________________________________________________
consensus             GGAGACCCAGGTGAGATACACGTTATGGGTTCTTGATTTCACGGCGGCGGATGGGCATTT
 
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JMFS141C04+           GTGAGAATGATCAAACAAATAAACTGAGAAAAAAAAAAAAAAAAAAGGAGTGGCTGAGCT
JMFS013F04+           CTGAGAATGATCAAACAAATAAACTGAGAAAAAAAAAAAAAAAAAAGGAGTGGCTGAGCT
JMFS120B09+           CTGAGAATGATCAAACAAATAAACTGAGAAAAAAAAAAAAAAAAAAGGAGTGGCTGAGCT
                      ____________________________________________________________
consensus             CTGAGAATGATCAAACAAATAAACTGAGAAAAAAAAAAAAAAAAAAGGAGTGGCTGAGCT
 
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JMFS120B09+           GCACAGCTGACTGCGTCTTTCAGCGCACAATGAAATAGAGAGAGAAGTTTAATGGTGTAG
                      ____________________________________________________________
consensus             GCACAGCTGACTGCGTCTTTCAGCGCACAATGAAATAGAGAGAGAAGTTTAATGGTGTAG