| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS039F02 | Sequence | 627 | 011828 (7) | ref|XP_009595696.1| | 1e-68 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] | |||||
| JMFS092B10 | Sequence | 627 | 011828 (7) | ref|XP_006354416.1| | 3e-06 | PREDICTED: uncharacterized protein LOC102594467 isoform X1 [Solanum tuberosum] | |||||
| JMFS118D07 | Sequence | 629 | 011828 (7) | ref|XP_009797313.1| | 9e-07 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana sylvestris] | |||||
| JMFS119A05 | Sequence | 605 | 011828 (7) | ref|XP_006354416.1| | 9e-13 | PREDICTED: uncharacterized protein LOC102594467 isoform X1 [Solanum tuberosum] | |||||
| JMFS122B02 | Sequence | 586 | 011828 (7) | ref|XP_009602223.1| | 187 | PREDICTED: uncharacterized protein LOC104097371 [Nicotiana tomentosiformis] | |||||
| JMFS123C03 | Sequence | 572 | 011828 (7) | ref|XP_004239250.1| | 43.5 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | |||||
| JMFS139F10 | Sequence | 626 | 011828 (7) | ref|XP_009595696.1| | 1e-63 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS122B02+ CCTATGG
____________________________________________________________
consensus CCTATGG
. : . : . : . : . : . :
JMFS122B02+ AAGGGGTTTGGATGGTTAGCCCAATGGTTTTGTAGCCGGTTATTTAGAGATGGACCAGAA
____________________________________________________________
consensus AAGGGGTTTGGATGGTTAGCCCAATGGTTTTGTAGCCGGTTATTTAGAGATGGACCAGAA
. : . : . : . : . : . :
JMFS122B02+ GAGGTTAACTGTGGTATGTTTCCATTGTAGTGGACCCTGTGGGGCAGGCTAGATAACTGC
JMFS139F10+ TTGTAGTGGACCCTGTGGGGCAGGCTAGATAACTGC
____________________________________________________________
consensus GAGGTTAACTGTGGTATGTTTCCATTGTAGTGGACCCTGTGGGGCAGGCTAGATAACTGC
. : . : . : . : . : . :
JMFS122B02+ TTGTTTGAGCTTGACATAGAAGAGAGATCTGCAGAAGAGAAGGGTGACTGATGCCCATGT
JMFS139F10+ TTGTTTGAGCTTGACATAGAAGAGAGATCTGCAGAAGAGAAGGGTGACTGATGCCCATGT
____________________________________________________________
consensus TTGTTTGAGCTTGACATAGAAGAGAGATCTGCAGAAGAGAAGGGTGACTGATGCCCATGT
. : . : . : . : . : . :
JMFS122B02+ GATGAAAGATCATAGTGATGGGAAAGACTGCGCGGTGAAGCCTGCTGTGATCTGCCACCA
JMFS139F10+ GATGAAAGATCATAGTGATGGGAAAGACTGCGCGGTGAAGCCTGCTGTGATCTGCCACCA
JMFS039F02+ AGTGATGGGAAAGACTGCGCGGTGAAGCCTGCTGTGATCTGCCACCA
____________________________________________________________
consensus GATGAAAGATCATAGTGATGGGAAAGACTGCGCGGTGAAGCCTGCTGTGATCTGCCACCA
. : . : . : . : . : . :
JMFS122B02+ GGAGGAGGAAAGGAAGTGAAAGATGATTTTTGTAACAATATTGGTTCACTAGAGCAGTGT
JMFS139F10+ GGAGGAGGAAAGGAAGTGAAAGATGATTTTTGTAACAATATTGGTTCACTAGAGCAGTGT
JMFS039F02+ GGAGNAGGAAAGGAAGTGAAAGATGATTTTTGTAACAATATTGGTTCACTAGAGCAGTGT
____________________________________________________________
consensus GGAGGAGGAAAGGAAGTGAAAGATGATTTTTGTAACAATATTGGTTCACTAGAGCAGTGT
. : . : . : . : . : . :
JMFS122B02+ TGTAGCTGCTGGATCTGTGGCTGATGAGGGTAAGAAGACGTTCGGTATAGTGGTTTAGAC
JMFS139F10+ TGTAGCTGCTGGATCTGTGGCTGATGAGGGTAAGAAGACGTTCGGTATAGTGGTTTAGAC
JMFS039F02+ TGTAGCTGCTGGATCTGTGGCTGATGAGGGTAAGAAGACGTTCGGTATAGTGGTTTAGAC
____________________________________________________________
consensus TGTAGCTGCTGGATCTGTGGCTGATGAGGGTAAGAAGACGTTCGGTATAGTGGTTTAGAC
. : . : . : . : . : . :
JMFS122B02+ TCTGCAAGATGTACTGAATTGAGGTGTGGCTGAGAAGACCATTTTTTGTTTTCCTGGTAG
JMFS139F10+ TCTGCAAGATGTACTGAATTGAGGTGTGGCTGAGAAGACCATTTTTTGTTTTCCTGGTAG
JMFS039F02+ TCTGCAAGATGTACTGAATTGAGGTGTGGCTGAGAAGACCATTTTTTGTTTTCCTGGTAG
JMFS119A05+ TGGTAG
____________________________________________________________
consensus TCTGCAAGATGTACTGAATTGAGGTGTGGCTGAGAAGACCATTTTTTGTTTTCCTGGTAG
. : . : . : . : . : . :
JMFS122B02+ CATTCACTATCAGATAAATGCTGATCAAACCATTCATT-AAAATCTGCATCTCTTGCCCA
JMFS139F10+ CATTCACTATCAGATAAATGCTGATCAAACCATTCATT-AAAATCTGCATCTCTTGCCCA
JMFS039F02+ CATTCACTATCAGATAAATGCTGATCAAACCATTCATT-AAAATCTGCATCTCTTGCCCA
JMFS092B10+ TCAAACCATTCATT-AAAATCTGCATCTCTTGCCCA
JMFS118D07+ AATGCTGATCAAACCATTCATTAAAAATCTGCATCTCTTGCCCA
JMFS119A05+ CATTCACTATCAGATAAATGCTGATCAAACCATTCATT-ANAATCTGCATCTCTTGCCCA
____________________________________________________________
consensus CATTCACTATCAGATAAATGCTGATCAAACCATTCATT-AAAATCTGCATCTCTTGCCCA
. : . : . : . : . : . :
JMFS122B02+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAAGATCCTGATCCACGATCGCCAATAACTCC
JMFS139F10+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAAGATCCTGATCCACGATCGCCAATAACTCC
JMFS039F02+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAAGATCCTGATCCACGATCGCCAATAACTCC
JMFS092B10+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAGGATCCTGATCCACGATCGCCAATAACTCC
JMFS118D07+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAGGATCCTGATCCACGATCGCCAATAACTCC
JMFS123C03+ GATCGCCAATAACTCC
JMFS119A05+ TTCAGCTGCAGATGAACTTTCCCTAGAAAAGGATCCTGATCCACGATCGCCAATAACTCC
____________________________________________________________
consensus TTCAGCTGCAGATGAACTTTCCCTAGAAAAGGATCCTGATCCACGATCGCCAATAACTCC
. : . : . : . : . : . :
JMFS122B02+ AGGATGTCTCGGGCCAGTGACAACTCTGTTCAACTTTGAA
JMFS139F10+ AGGATGTCTCGGGCCAGTGACAACTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
JMFS039F02+ AGGATGTCTCGGGCCAGTGACAACTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
JMFS092B10+ AGGATGTCTTGGGCCCATGACATTTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
JMFS118D07+ AGGATGTCTTGGGCCCATGACATTTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
JMFS123C03+ AGGATGT-TTGGGCCCATGACATTTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
JMFS119A05+ AGGATGTCTTGGGCCCATGACATTTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
____________________________________________________________
consensus AGGATGTCTTGGGCCCATGACATTTCTGTTCAACTTTGAAAATGTAGTTGCTAGGTCATC
. : . : . : . : . : . :
JMFS139F10+ TATATCAGATAATGAACCTAATGTTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
JMFS039F02+ TATATCAGATAATGAACCTAATGTTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
JMFS092B10+ TAAATCAGATAATGAACCTAACATTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
JMFS118D07+ TAAATCAGATAATGAACCTAACATTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
JMFS123C03+ TAAATCAGATAATGAACCTAACATTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
JMFS119A05+ TAAATCAGATAATGAACCTAACATTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
____________________________________________________________
consensus TAAATCAGATAATGAACCTAACATTGATCCCTCATCTTTCTCAAACAAATGATACTCCTG
. : . : . : . : . : . :
JMFS139F10+ TATATCTTCATCGCCAAGCCTGCCACCAACTACTCCACCATCAGCAGGTAC
JMFS039F02+ TATATCTTCATCGCCAAGCCTGCCACCAACTACTCCACCATCAGCAGGTAC------ACT
JMFS092B10+ TATATCGTCATCGCCAAGTCCGCCACCGACTCCTCCAGCACCAGCAGGTACACTACTACT
JMFS118D07+ TATATCGTCATCGCCAAGTCCGCCACCGACTCCTCCAGCACCAGCAGGTACACTACTACT
JMFS123C03+ TATATCGTCATCGCCAAGTCCGCCACCGACTCCTCCAGCACCAGCAGGTACACTACTACT
JMFS119A05+ TATATCGTCATCGCCAAGTCCGCCACCGACTCCTCCAGCACCAGCAGGTACACTACTACT
____________________________________________________________
consensus TATATCGTCATCGCCAAGTCCGCCACCGACTCCTCCAGCACCAGCAGGTACACTACTACT
. : . : . : . : . : . :
JMFS039F02+ ATCTTCTTCATCTTCTAAACCACCTAACTCGACTTCCTCCAGAACATTTCGCCCAAAAAA
JMFS092B10+ ATCTTCCTCATCCTCTAAACCCCCTAATTCAACTTCCTCAAGAACATTTCGCCCAAAAAA
JMFS118D07+ ATCTTCCTCATCCTCTAAACCCCCTAATTCAACTTCCTCAAGAACATTTCGCCCAAAAAA
JMFS123C03+ ATCTTCCTCATCCTCTAAACCCCCTAATTCAACTTCCTCAAGAACATTTCGCCCAAAAAA
JMFS119A05+ ATCTTCCTCATCCTCTAAACCCCCTAATTCAACTTCCTCAAGAACATTTCGCCCAAAAAA
____________________________________________________________
consensus ATCTTCCTCATCCTCTAAACCCCCTAATTCAACTTCCTCAAGAACATTTCGCCCAAAAAA
. : . : . : . : . : . :
JMFS039F02+ CGCGTACTGGGATGCATCGAACATTGCACTATC
JMFS092B10+ CGCGTACTGGGAGGCATCGAACAGTGCACTATCAGAGACGGAGCTAGAGGAGCTGGTGAA
JMFS118D07+ CGCGTACTGGGAGGCATCGAACAGTGCACTATCAGAGACGGAGCTAGAGGAGCTGGTGAA
JMFS123C03+ CGCGTACTGGGAGGCATCGAACAGTGCACTATCAGAGACGGAGCTAGAGGAGCTGGTGAA
JMFS119A05+ CGCGTACTGGGAGGCATCGAACAGTGCACTATCAGAGACGGAGCTAGAGGAGCTGGTGAA
____________________________________________________________
consensus CGCGTACTGGGAGGCATCGAACAGTGCACTATCAGAGACGGAGCTAGAGGAGCTGGTGAA
. : . : . : . : . : . :
JMFS092B10+ GTCCTTGAGATCCTTCCCGCTGGATCTCTCCATAATTACAACA
JMFS118D07+ GTCCTTGAGATCCTTCCCGCTGGATCTCTCCATAATTACAACA
JMFS123C03+ GTCCTTGAGATCCTTCCCGCTGGATCTCTCCATAATTACAACA
JMFS119A05+ GTCCTTGAGATCCTTCCCGCTGGATCTCTCCATAATTACAACAAAACAAAAAACGAAGAA
____________________________________________________________
consensus GTCCTTGAGATCCTTCCCGCTGGATCTCTCCATAATTACAACAAAACAAAAAACGAAGAA
. : . : . : . : . : . :
JMFS119A05+ AATCAGCAACGCTAGCACCAGCCGCGCCTAGGCATATGAAGAACGGGAGAAGTGAACCAT
____________________________________________________________
consensus AATCAGCAACGCTAGCACCAGCCGCGCCTAGGCATATGAAGAACGGGAGAAGTGAACCAT
. : . : . : . : . : . :
JMFS119A05+ TGAAGCGAATCTTAAAACTCCTTCTCGGCAGAAGTGAGGATTCTAGGGTTTTCCAGGGCA
____________________________________________________________
consensus TGAAGCGAATCTTAAAACTCCTTCTCGGCAGAAGTGAGGATTCTAGGGTTTTCCAGGGCA