Contig 011826:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014I14Sequence533011826 (5)gb|AAP83138.1|2e-43lipoxygenase [Nicotiana attenuata]638011836 (2)ref|NP_001275115.1|8e-97linoleate 13S-lipoxygenase 3-1, chloroplastic [Solanum tuberosum] sp|O24371.1|LO
JMFS039A09Sequence627011826 (5)gb|AAP83138.1|5e-70lipoxygenase [Nicotiana attenuata]
JMFS050D08Sequence612011826 (5)gb|AAP83138.1|3e-62lipoxygenase [Nicotiana attenuata]
JMFS115E11Sequence642011826 (5)gb|AAP83138.1|1e-66lipoxygenase [Nicotiana attenuata]
JMFS129H07Sequence627011826 (5)gb|AAP83138.1|1e-68lipoxygenase [Nicotiana attenuata]

Alignment

This contig is upended


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JMFS039A09+              ACTGAACCCATGAACTGCAGGGGAAATGAACCGGACCACTAGAGAACCCTTCAACAG
JMFS129H07+                   ACCCATGAACTGCAGGGGAAATGAACCGGACCACTAGAGAACCCTTCAACAG
JMFS050D08+                                  GGGAAATGAACCGGACCACTAGAGAACCCTCAACCAG
JMFS115E11+                                  GGGAAATGAACCGGACCACTAGAGAACCCTTCAACAG
                      ____________________________________________________________
consensus                ACTGAACCCATGAACTGCAGGGGAAATGAACCGGACCACTAGAGAACCCTTCAACAG
 
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JMFS039A09+           TAATCTTTTCAAGAAAGAATTCTTGTTGATGTTTGTTAACCACCGTTATAGCACCTGGAC
JMFS129H07+           TAATCTTTTCAAGAAAGAATTCTTGTTGATGTTTGTTAACCACCGTTATAGCACCTGGAC
JMFS050D08+           TAATCTTCTCAAGAAAGAATTCTTGTTGATGTTTGTTAACCACCGTTATAGCACCTGGAC
JMFS115E11+           TAATCTTTTCAAGAAAGAATTCTTGTTGATGTTTGTTAACCACCGTTATAGCACCTGGAC
                      ____________________________________________________________
consensus             TAATCTTTTCAAGAAAGAATTCTTGTTGATGTTTGTTAACCACCGTTATAGCACCTGGAC
 
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JMFS039A09+           ACCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
JMFS129H07+           ACCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
JMFS050D08+           ACCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
JMFF014I14+            CCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
JMFS115E11+           ACCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
                      ____________________________________________________________
consensus             ACCCAAAATTGGTGTCCAATTCAAACTCAACACTGTAATTAACTGTCTCTGTTTTCATCC
 
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JMFS039A09+           CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
JMFS129H07+           CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
JMFS050D08+           CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
JMFF014I14+           CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
JMFS115E11+           CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
                      ____________________________________________________________
consensus             CAGTTTTAACCGCCCAGTCCTTCAACACCGCCGGTTCACTCTTCCTCGGACCCTTGGTTT
 
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JMFS039A09+           TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
JMFS129H07+           TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
JMFS050D08+           TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
JMFF014I14+           TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
JMFS115E11+           TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
                      ____________________________________________________________
consensus             TAGGATCAATTTCTGTGCTGATAAGCTCCAACACAACATTCCTTCCCAACTGATCAGTGA
 
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JMFS039A09+           AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
JMFS129H07+           AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
JMFS050D08+           AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
JMFF014I14+           AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
JMFS115E11+           AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
                      ____________________________________________________________
consensus             AAGCATCAAAACGTTTGATCAAAGCCTCCTTAAACCCTGCCTCCTTCTTGTTCCCCACAG
 
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JMFS039A09+           TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
JMFS129H07+           TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
JMFS050D08+           TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
JMFF014I14+           TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
JMFS115E11+           TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
                      ____________________________________________________________
consensus             TCACCACAGCTCTGACCTTAAACTTCACCGCTTTCTCAGGAACCATCTTAAACACTCTCT
 
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JMFS039A09+           GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
JMFS129H07+           GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
JMFS050D08+           GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
JMFF014I14+           GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
JMFS115E11+           GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
                      ____________________________________________________________
consensus             GCTCAACGCTGACAGACGCCATTGGAGCGATCCTCACGCCCCTCTTCAAACGCAGCCGGT
 
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JMFS039A09+           TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
JMFS129H07+           TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
JMFS050D08+           TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
JMFF014I14+           TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
JMFS115E11+           TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
                      ____________________________________________________________
consensus             TCACGTGAACCCGGTTCTCAAGATTCACCATCCCACTCGATGAAGAAAGGAATGAACCTG
 
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JMFS039A09+           CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
JMFS129H07+           CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
JMFS050D08+           CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
JMFF014I14+           CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
JMFS115E11+           CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
                      ____________________________________________________________
consensus             CCTTCGTCTTCATCTTCGTCTTGTCCATCACAGATAAACCCCAGAATTCATTCGCAAGAG
 
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JMFS039A09+           CCATGCTTAGCTTTCGATCTCGACCCAGAA                              
JMFS129H07+           CCATGCTTAGCTTTCGATCTCGACCCAGAAGTTAA                         
JMFS050D08+           CCATGCTTAGCTTTCGATCTCGACCCAGAAGTTAA                         
JMFF014I14+           CCATGCTTAGCTTTCGATCTCGACCCAGAAGTTAAGGTTGTCGGTTTCGATTCC      
JMFS115E11+           CCATGCTTAGCTTTCGATCTCGACCCAGAAGTTAAGGTTGTCGGTTTCGATTCCTCTCCA
                      ____________________________________________________________
consensus             CCATGCTTAGCTTTCGATCTCGACCCAGAAGTTAAGGTTGTCGGTTTCGATTCCTCTCCA