Contig 011824:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS071C10+                                             AGCAGTTAAGCTCCGCCAGAATGCGA
JMFS111A11+                                                                    CGA
                      ____________________________________________________________
consensus                                               AGCAGTTAAGCTCCGCCAGAATGCGA
 
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JMFS071C10+           GCCAGCACGGGGAAGNCGGTGATGGAGAGAGCAACTCCCATGAAGACCGAGTATGGAGCG
JMFS111A11+           GCCAGCACGGGGAAGCCGGTGATGGAGAGAGCAACTCCCATGAAGACCGAGTATGGAGCG
                      ____________________________________________________________
consensus             GCCAGCACGGGGAAGCCGGTGATGGAGAGAGCAACTCCCATGAAGACCGAGTATGGAGCG
 
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JMFS071C10+           AAGCCGACTTCATCGGCGCCTTGGACAACTCGCCGGAAAAGGAAAGTTATTCCAATGCCG
JMFS111A11+           AAGCCGACTTCATCGGCGCCTTGGACAACTCGCCGGAAAAGGAAAGTTATTCCAATGCCG
                      ____________________________________________________________
consensus             AAGCCGACTTCATCGGCGCCTTGGACAACTCGCCGGAAAAGGAAAGTTATTCCAATGCCG
 
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JMFS071C10+           AAGACGAAAGGGAGGGATATTCCGGCCGCCGCTATGCAAAACGCACTTTTCCCATTTCTT
JMFS111A11+           AAGACGAAAGGGAGGGATATTCCGGCCGCCGCTATGCAAAACGCACTTTTCCCATTTCTT
                      ____________________________________________________________
consensus             AAGACGAAAGGGAGGGATATTCCGGCCGCCGCTATGCAAAACGCACTTTTCCCATTTCTT
 
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JMFS071C10+           CGAAGGGAAGACAAGTCGAGCTCAAGGCCGACCAAGAAAAGATAGAAGAGTAGCCCAATG
JMFS111A11+           CGAAGGGAAGACAAGTCGAGCTCAAGGCCGACCAAGAAAAGATAGAAGAGTAGCCCAATG
                      ____________________________________________________________
consensus             CGAAGGGAAGACAAGTCGAGCTCAAGGCCGACCAAGAAAAGATAGAAGAGTAGCCCAATG
 
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JMFS071C10+           CTTGACACTGATTCAAGAATTGGTGCACTCCATTCAGGAAATATAGTTTGCATGTATTCT
JMFS111A11+           CTTGACACTGATTCAAGAATTGGTGCACTCCATTCAGGAAATATAGTTTGCATGTATTCT
                      ____________________________________________________________
consensus             CTTGACACTGATTCAAGAATTGGTGCACTCCATTCAGGAAATATAGTTTGCATGTATTCT
 
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JMFS071C10+           TGATTTCTTCCAAAAGCAGATGGCCCTAGGATAACCCCACCTAGAATTTCAGCGATGACT
JMFS111A11+           TGATTTCTTCCAAAAGCAGATGGCCCTAGGATAACCCCACCTAGAATTTCAGCGATGACT
                      ____________________________________________________________
consensus             TGATTTCTTCCAAAAGCAGATGGCCCTAGGATAACCCCACCTAGAATTTCAGCGATGACT
 
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JMFS071C10+           TTGGGTTGTCGAAGGGGTTTGAGTAGGAAGGCGAAGAAGCGGCTAACAACGATGACTAGG
JMFS111A11+           TTGGGTTGTCGAAGGGGTTTGAGTAGGAAGGCGAAGAAGCGGCTAACAACGATGACTAGG
                      ____________________________________________________________
consensus             TTGGGTTGTCGAAGGGGTTTGAGTAGGAAGGCGAAGAAGCGGCTAACAACGATGACTAGG
 
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JMFS071C10+           GTGGTTTGTACAATCAACAATGGCAATGCAAAATTAAGGGGATTTTGGCCCTGCCATGCT
JMFS111A11+           GTGGTTTGTACAATCAACAATGGCAATGCAAAATTAAGGGGATTTTGGCCCTGCCATGCT
                      ____________________________________________________________
consensus             GTGGTTTGTACAATCAACAATGGCAATGCAAAATTAAGGGGATTTTGGCCCTGCCATGCT
 
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JMFS071C10+           CCATCCGATGATGTTTTTATTGCTGTCATGTTGTTCATCATCGCCATTTTTTTTTTTAAT
JMFS111A11+           CCATCCGATGATGTTTTTATTGCTGTCATGTTGTTCATCATCGCCATTTTTTTTTTTAAT
                      ____________________________________________________________
consensus             CCATCCGATGATGTTTTTATTGCTGTCATGTTGTTCATCATCGCCATTTTTTTTTTTAAT
 
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JMFS071C10+           AATAATATAAAATGAACTTGCTAGTCTCTACACCAAAAAAGGGTGAGG            
JMFS111A11+           AATAATATAAAATGAACTTGCTAGTCTCTACACCAAAAAAGGGTGAGGCATAAAACGAAG
                      ____________________________________________________________
consensus             AATAATATAAAATGAACTTGCTAGTCTCTACACCAAAAAAGGGTGAGGCATAAAACGAAG