Contig 011822:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013N13Sequence591011822 (2)ref|XP_006358605.1|2e-111PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]569020167gb|KDO43303.1|1e-65hypothetical protein CISIN_1g0420481mg, partial [Citrus sinensis]
JMFS110A05Sequence625011822 (2)ref|XP_009804320.1|2e-52PREDICTED: dynamin-related protein 1E-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF013N13+                            GGTTATGGCTAAGATGATGCAGTTTGGCTTCTCAACATATGAT
                      ____________________________________________________________
consensus                              GGTTATGGCTAAGATGATGCAGTTTGGCTTCTCAACATATGAT
 
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JMFF013N13+           CGAACCATGTCTTCAATTTCCCGAACAATACTTTCGGGCTGCCCCTCTACAGCAACCTTA
                      ____________________________________________________________
consensus             CGAACCATGTCTTCAATTTCCCGAACAATACTTTCGGGCTGCCCCTCTACAGCAACCTTA
 
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JMFF013N13+           GTCAGCCCAGGTAAATCTACCAATGTCAAGTTAACAACATTTGGAGAGTAAATGCTAAGA
                      ____________________________________________________________
consensus             GTCAGCCCAGGTAAATCTACCAATGTCAAGTTAACAACATTTGGAGAGTAAATGCTAAGA
 
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JMFF013N13+           TTAATAGGAAGAGGAGAGATCTGCTTTGTCTTTCCAGTAACTCTGTCAGTTTCATCTTGG
                      ____________________________________________________________
consensus             TTAATAGGAAGAGGAGAGATCTGCTTTGTCTTTCCAGTAACTCTGTCAGTTTCATCTTGG
 
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JMFF013N13+           ATCTCCTTTCTGACCAAAGAAAAATCTGTAAATCTTCTATTTCCAGAATGAAGGAACTGT
JMFS110A05+                                              TCTATTTCCAGAATGAAGGAACTGT
                      ____________________________________________________________
consensus             ATCTCCTTTCTGACCAAAGAAAAATCTGTAAATCTTCTATTTCCAGAATGAAGGAACTGT
 
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JMFF013N13+           GCATACTCCTGTTGTCCTGGCTCTATCTTGTAAAGTTGCAAAACAAGTGGCCTTCTTGTC
JMFS110A05+           GCATACTCCTGTTGTCCTGGCTCTATCTTGTAAAGTTGCAAAACAAGTGGCCTTCTTGTC
                      ____________________________________________________________
consensus             GCATACTCCTGTTGTCCTGGCTCTATCTTGTAAAGTTGCAAAACAAGTGGCCTTCTTGTC
 
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JMFF013N13+           ACAATTCCTGATCCTCTAGGAAGAAAATCACGCCCCACAATACTCTCCAACACCGACGAC
JMFS110A05+           ACAATTCCTGATCCTCTAGGAAGAAAATCACGCCCCACAATACTCTCCAACACCGACGAC
                      ____________________________________________________________
consensus             ACAATTCCTGATCCTCTAGGAAGAAAATCACGCCCCACAATACTCTCCAACACCGACGAC
 
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JMFF013N13+           TTCCCGGAACTTTGGCCGCCGAGGACGACGATGGTAGGGAGAGCGTCCCAGAGAGTAGGC
JMFS110A05+           TTCCCGGAACTTTGGCCGCCGAGGACGACGATGGTAGGGAGAGCGTCCCAGAGAGTAGGC
                      ____________________________________________________________
consensus             TTCCCGGAACTTTGGCCGCCGAGGACGACGATGGTAGGGAGAGCGTCCCAGAGAGTAGGC
 
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JMFF013N13+           AAACTCCGATCATCGCCATAGTCGCCGAGGATCGTACACGCCTTCTGAATCCTGTTGACA
JMFS110A05+           AAACTCCGATCATCGCCATAGTCGCCGAGGATCGTACACGCCTTCTGAATCCTGTTGACA
                      ____________________________________________________________
consensus             AAACTCCGATCATCGCCATAGTCGCCGAGGATCGTACACGCCTTCTGAATCCTGTTGACA
 
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JMFF013N13+           AGCGCAATCAAACCTTCCATTCCGCCGGTTCGAGGCAGCGCTTTCTCCTTCTTCGAGACG
JMFS110A05+           AGCGCAATCAAACCTTCCATTCCGCCGGTTCGAGGCAGCGCTCTCTCCTTCTTCGAGACG
                      ____________________________________________________________
consensus             AGCGCAATCAAACCTTCCATTCCGCCGGTTCGAGGCAGCGCTTTCTCCTTCTTCGAGACG
 
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JMFF013N13+           AAGCTAAC                                                    
JMFS110A05+           AAGCTAACGAGTATCGGCAGGAGTAGGAGGAAGAGAAGTAGTAGAAGTGGCGAAGCAGAG
                      ____________________________________________________________
consensus             AAGCTAACGAGTATCGGCAGGAGTAGGAGGAAGAGAAGTAGTAGAAGTGGCGAAGCAGAG
 
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JMFS110A05+           GCGGAGAAGGGGAGAGTGGGAGTTGTAACGGAATCTAATTTTATCAAATTATTATAATTA
                      ____________________________________________________________
consensus             GCGGAGAAGGGGAGAGTGGGAGTTGTAACGGAATCTAATTTTATCAAATTATTATAATTA
 
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JMFS110A05+           TTATTATTATTATTGTGATAATTAGGAATTATTATTAAATGTGTTTTGATATTTGGGGAT
                      ____________________________________________________________
consensus             TTATTATTATTATTGTGATAATTAGGAATTATTATTAAATGTGTTTTGATATTTGGGGAT
 
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JMFS110A05+           TGTTGTTGTTGTTGGGTTGGAGTTGGCGGAAGGAGTGCGCCACGTGAACACGTCTGGGGA
                      ____________________________________________________________
consensus             TGTTGTTGTTGTTGGGTTGGAGTTGGCGGAAGGAGTGCGCCACGTGAACACGTCTGGGGA
 
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JMFS110A05+           GGGGTCATGTTTCCTTCGTGGGATGAAGAGATGTTTGAATTGTTGGTTTTGAAAATATGA
                      ____________________________________________________________
consensus             GGGGTCATGTTTCCTTCGTGGGATGAAGAGATGTTTGAATTGTTGGTTTTGAAAATATGA