Contig 011819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037H01Sequence537011819 (3)716013098 (4)ref|XP_009773170.1|1e-07PREDICTED: protein MEI2-like 2 isoform X1 [Nicotiana sylvestris]
JMFS101G02Sequence614011819 (3)
JMSF025G07Sequence611011819 (3)718013098 (4)ref|XP_009773170.1|5e-15PREDICTED: protein MEI2-like 2 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF025G07+                                                        TCAGAGTCATTGGGG
JMFS101G02+                                                         CAGAGTCATTGGGG
                      ____________________________________________________________
consensus                                                          TCAGAGTCATTGGGG
 
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JMFF037H01+                                                                     CG
JMSF025G07+           ATTAATTTTTCATGTGGAAGAACAGGCAACGAGCTGGAGAACAAGCTAACATCTGTTGCG
JMFS101G02+           ATTAATTTTTCATGTGGAAGAACAGGCAACGAGCTGGAGAACAAGCTAACATCTGTTGCG
                      ____________________________________________________________
consensus             ATTAATTTTTCATGTGGAAGAACAGGCAACGAGCTGGAGAACAAGCTAACATCTGTTGCG
 
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JMFF037H01+           GCATGATATGCAGCAGTTCCAAGAGGGATGGCCCACGCATTTCTTAGCCTCTCAGAAATG
JMSF025G07+           GCATGATATGCAGCAGTTCCAAGAGGGATGGCCCACGCATTTCTTAGCCTCTCAGAAATG
JMFS101G02+           GCATGATATGCAGCAGTTCCAAGAGGGATGGCCCACGCATTTCTTAGCCTCTCAGAAATG
                      ____________________________________________________________
consensus             GCATGATATGCAGCAGTTCCAAGAGGGATGGCCCACGCATTTCTTAGCCTCTCAGAAATG
 
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JMFF037H01+           TTTGCTGCTGGAACTTTGTCTAGACCTCGAGAGTCACCTGAACCAGGTATCTTTGAAGGC
JMSF025G07+           TTTGCTGCTGGAACTTTGTCTAGACCTCGAGAGTCACCTGAACCAGGTATCTTTGAAGGC
JMFS101G02+           TTTGCTGCTGGAACTTTGTCTAGACCTCGAGAGTCACCTGAACCAGGTATCTTTGAAGGC
                      ____________________________________________________________
consensus             TTTGCTGCTGGAACTTTGTCTAGACCTCGAGAGTCACCTGAACCAGGTATCTTTGAAGGC
 
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JMFF037H01+           GCATCCATTCAGAACTGCCTTCAAAATAACCNCAAGTGTTCAGACTCCAAGAGANGCCAA
JMSF025G07+           GCATCCATTCAGAACTGCCTTCAAAATAACCACAAGTGTTCAGACTCCAAGAGATGCCAA
JMFS101G02+           GCATCCATTCAGAACTGCCTTCAAAATAACCACAAGTGTTCAGACTCCAAGAGATGCCAA
                      ____________________________________________________________
consensus             GCATCCATTCAGAACTGCCTTCAAAATAACCACAAGTGTTCAGACTCCAAGAGATGCCAA
 
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JMFF037H01+           ATTCAACGGAAGAAAATCTGTTCCCACCACACTGAATTATGANCTTTGCGCCTCGAAGAG
JMSF025G07+           ATTCAACGGAAGAAAATCTGTTCCCACCACACTGAATTATGAACTTTGCGCCTCGAAGAG
JMFS101G02+           ATTCAACGGAAGAAAATCTGTTCCCACCACACTGAATTATGAACTTTGCGCCTCGAAGAG
                      ____________________________________________________________
consensus             ATTCAACGGAAGAAAATCTGTTCCCACCACACTGAATTATGAACTTTGCGCCTCGAAGAG
 
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JMFF037H01+           GGTCAAGCCAAGCCCCGAAGCTATTTAAGCAAGATCCTCAAAGAGAGAAAACTCTTGGAC
JMSF025G07+           GGTCAAGCCAAGCCCCGAAGCTATTTAAGCAAGATCCTCAAAGAGAGAAAACTCTTGGAC
JMFS101G02+           GGTCAAGCCAAGCCCCGAAGCTATTTAAGCAAGATCCTCAAAGAGAGAAAACTCTTGGAC
                      ____________________________________________________________
consensus             GGTCAAGCCAAGCCCCGAAGCTATTTAAGCAAGATCCTCAAAGAGAGAAAACTCTTGGAC
 
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JMFF037H01+           TCGGTTATGGAAGTAGCAAGAATAACAAGAAGAAAGGGTGGACGAAGAAATATAAGCACA
JMSF025G07+           TCGGTTATGGAAGTAGCAAGAATAACAAGAAGAAAGGGTGGACGAAGAAATATAAGCACA
JMFS101G02+           TCGGTTATGGAAGTAGCAAGAATAACAAGAAGAAAGGGTGGACGAAGAAATATAAGCACA
                      ____________________________________________________________
consensus             TCGGTTATGGAAGTAGCAAGAATAACAAGAAGAAAGGGTGGACGAAGAAATATAAGCACA
 
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JMFF037H01+           AAAAAAACAGTTTCGTAAAAGCAGAGGAATTGTTTTCTTCTACTCTTTTACTTCCTTCTC
JMSF025G07+           AAAAAAACAGTTTCGTAAAAGCAGAGGAATTGTTTTCTTCTACTCTTTTACTTCCTTCTC
JMFS101G02+           AAAAAAACAGTTTCGTAAAAGCAGAGGAATTGTTTTCTTCTACTCTTTTACTTCCTTCTC
                      ____________________________________________________________
consensus             AAAAAAACAGTTTCGTAAAAGCAGAGGAATTGTTTTCTTCTACTCTTTTACTTCCTTCTC
 
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JMFF037H01+           TCCCGCCGGAACACTAGTTAGGAGAGAGAAATCCCAGTGTAGAGAGAGAGAGAGAGAGAG
JMSF025G07+           TCCCGCCGGAACACTAGTTAGGAGAGAGAAATCCCAGTGTAGAGAGAGAGAGAGAGAGAG
JMFS101G02+           TCCCGCCGGAACACTAGTTAGGAGAGAGAAATCCCAGTGTAGAGAGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             TCCCGCCGGAACACTAGTTAGGAGAGAGAAATCCCAGTGTAGAGAGAGAGAGAGAGAGAG
 
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JMFF037H01+           AGAATTGGGACCAAACCCGCATACCAAAACACAACACAGAGACACACACGACTAC     
JMSF025G07+           AGAATTGGGACCAAACCCGCATACCAAAACACAACACAGAGACACACACGACTAC     
JMFS101G02+           AGAATTGGGACCAAACCCGCATACCAAAACACAACACAGAGACACACACGACTACACGAG
                      ____________________________________________________________
consensus             AGAATTGGGACCAAACCCGCATACCAAAACACAACACAGAGACACACACGACTACACGAG