Contig 011818:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+                                        AGCCCTGCACTAGGCACCCTCTTTATGTATG
                      ____________________________________________________________
consensus                                          AGCCCTGCACTAGGCACCCTCTTTATGTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           CACGCTTCTCAGCCTTACTCGCCTGTTTTTCACCCGTGTCCGTTTTGGGCATTATTGTCA
                      ____________________________________________________________
consensus             CACGCTTCTCAGCCTTACTCGCCTGTTTTTCACCCGTGTCCGTTTTGGGCATTATTGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           CATGTTCCGGTGGCTTGGGCATGGCCACGGGTTCTGGTGGCTTGGGCATTGTCATATGTT
                      ____________________________________________________________
consensus             CATGTTCCGGTGGCTTGGGCATGGCCACGGGTTCTGGTGGCTTGGGCATTGTCATATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           CTGGTGGCTTACTTTGAACCACCATAGGCGACTCGGGTTCTCTACCAGAACCTCCTCCTC
                      ____________________________________________________________
consensus             CTGGTGGCTTACTTTGAACCACCATAGGCGACTCGGGTTCTCTACCAGAACCTCCTCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           GTGCTTCGCTTCTCACACTGTCATCATTACCAGAGGAAGCCTGAGATCGAGATGGCCACA
JMFS100H04+                                                              ATGGGCACA
                      ____________________________________________________________
consensus             GTGCTTCGCTTCTCACACTGTCATCATTACCAGAGGAAGCCTGAGATCGAGATGGGCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           TTGCAGCCGAAACCGATTGAAAAAATCCATTCTTGGAAATGCTTGGTCCCACACATGTAT
JMFS100H04+           TTGCAGCCGAAACCGATTGAAAAAATCCATTCTTGGAAATGCTTGGTCCCACACATGTAT
                      ____________________________________________________________
consensus             TTGCAGCCGAAACCGATTGAAAAAATCCATTCTTGGAAATGCTTGGTCCCACACATGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           TCCCCATCTAGTCCAACACTCCTAAAAAGTCCCACAACTTCC-AAAAACCCTTATAAGAG
JMFS100H04+           TCCCCATCTAGTCCAACACTCCTAAAAAGTCCCACAACTTCCAAAAAACCCTTATAAGAG
                      ____________________________________________________________
consensus             TCCCCATCTAGTCCAACACTCCTAAAAAGTCCCACAACTTCCAAAAAACCCTTATAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           AGAGGACTATTCAATTCCCTAATCTTCACAAAGCTCCTCCCATACTTATTGCTAAACCAA
JMFS100H04+           AGAGGACTATTCAATTCCCTAATCTTCACAAAGCTCCTCCCATACTTATTGCTAAACCAA
                      ____________________________________________________________
consensus             AGAGGACTATTCAATTCCCTAATCTTCACAAAGCTCCTCCCATACTTATTGCTAAACCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           AAGTTGTCAACTCTTACAAAAATCAACCCAATATACACAAAATCAAAACACAAACTTCCT
JMFS100H04+           AAGTTGTCAACTCTTACAAAAATCAACCCAATATACACAAAATCAAAACACAAACTTCCT
                      ____________________________________________________________
consensus             AAGTTGTCAACTCTTACAAAAATCAACCCAATATACACAAAATCAAAACACAAACTTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           CTAGCAATCAAGAAAGATTCAAATCAAAACTCAACAACCAAAACAGTACCCTATGATTCC
JMFS100H04+           CTAGCAATCAAGAAAGATTCAAATCAAAACTCAACAACCAAAACAGTACCCTATGATTCC
                      ____________________________________________________________
consensus             CTAGCAATCAAGAAAGATTCAAATCAAAACTCAACAACCAAAACAGTACCCTATGATTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS104H12+           TATCAATGGGATTTAGCACCAAAGTGAATATGTACAACAATAGAATTCTCAATAAAA   
JMFS100H04+           TATCAATGGGATTTAGCACCAAAGTGAATATGTACAACAATAGAATTCTCAATAAAAGCA
                      ____________________________________________________________
consensus             TATCAATGGGATTTAGCACCAAAGTGAATATGTACAACAATAGAATTCTCAATAAAAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS100H04+           CAAGAATTGAAAATAATCAACATATATATAAGAAGGGATGAATCTGTGAAGTGCAGAAAA
                      ____________________________________________________________
consensus             CAAGAATTGAAAATAATCAACATATATATAAGAAGGGATGAATCTGTGAAGTGCAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS100H04+           GAAAGAAAAAGGCAACCTCCCTCCTGATGATCATACAGACAGATAGATAGAGGCACCCCC
                      ____________________________________________________________
consensus             GAAAGAAAAAGGCAACCTCCCTCCTGATGATCATACAGACAGATAGATAGAGGCACCCCC