Contig 011815:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009F07Sequence517008871 (20)dbj|BAF46296.1|3e-104cytochrome P450 [Ipomoea nil]506011815 (19)dbj|BAF46296.1|4e-31cytochrome P450 [Ipomoea nil]
JMFF009M10Sequence613008871 (20)dbj|BAF46296.1|4e-139cytochrome P450 [Ipomoea nil]723011815 (19)dbj|BAF46296.1|1e-106cytochrome P450 [Ipomoea nil]
JMFF013J10Sequence517008871 (20)dbj|BAF46296.1|1e-106cytochrome P450 [Ipomoea nil]753011815 (19)dbj|BAF46296.1|3e-115cytochrome P450 [Ipomoea nil]
JMFF014O07Sequence554008871 (20)dbj|BAF46296.1|1e-114cytochrome P450 [Ipomoea nil]697011815 (19)dbj|BAF46296.1|1e-57cytochrome P450 [Ipomoea nil]
JMFF020D23Sequence529008871 (20)dbj|BAF46296.1|8e-109cytochrome P450 [Ipomoea nil]726011815 (19)dbj|BAF46296.1|6e-132cytochrome P450 [Ipomoea nil]
JMFF024P11Sequence432008871 (20)dbj|BAF46296.1|9e-83cytochrome P450 [Ipomoea nil]781011815 (19)dbj|BAF46296.1|3e-61cytochrome P450 [Ipomoea nil]
JMFF025G02Sequence492008871 (20)dbj|BAF46296.1|3e-99cytochrome P450 [Ipomoea nil]700011815 (19)dbj|BAF46296.1|1e-115cytochrome P450 [Ipomoea nil]
JMFF026A08Sequence554008871 (20)dbj|BAF46296.1|1e-114cytochrome P450 [Ipomoea nil]753011815 (19)dbj|BAF46296.1|3e-114cytochrome P450 [Ipomoea nil]
JMFF026N05Sequence536008871 (20)dbj|BAF46296.1|9e-110cytochrome P450 [Ipomoea nil]600011815 (19)dbj|BAF46296.1|2e-60cytochrome P450 [Ipomoea nil]
JMFF027A17Sequence508008871 (20)dbj|BAF46296.1|2e-114cytochrome P450 [Ipomoea nil]728011815 (19)dbj|BAF46296.1|3e-105cytochrome P450 [Ipomoea nil]
JMFF029D03Sequence716011815 (19)dbj|BAF46296.1|8e-130cytochrome P450 [Ipomoea nil]
JMFF034A01Sequence554008871 (20)dbj|BAF46296.1|1e-114cytochrome P450 [Ipomoea nil]772011815 (19)dbj|BAF46296.1|3e-135cytochrome P450 [Ipomoea nil]
JMFF034N08Sequence526008871 (20)dbj|BAF46296.1|1e-106cytochrome P450 [Ipomoea nil]723011815 (19)dbj|BAF46296.1|5e-96cytochrome P450 [Ipomoea nil]
JMFF038F10Sequence526008871 (20)dbj|BAF46296.1|1e-106cytochrome P450 [Ipomoea nil]727011815 (19)dbj|BAF46296.1|1e-130cytochrome P450 [Ipomoea nil]
JMFF040A05Sequence631008871 (20)dbj|BAF46296.1|3e-135cytochrome P450 [Ipomoea nil]687011815 (19)dbj|BAF46296.1|2e-98cytochrome P450 [Ipomoea nil]
JMFF041H07Sequence655008871 (20)dbj|BAF46296.1|1e-148cytochrome P450 [Ipomoea nil]596011815 (19)dbj|BAF46296.1|2e-69cytochrome P450 [Ipomoea nil]
JMFF045K09Sequence639008871 (20)dbj|BAF46296.1|4e-132cytochrome P450 [Ipomoea nil]582011815 (19)dbj|BAF46296.1|1e-49cytochrome P450 [Ipomoea nil]
JMFF046G20Sequence538008871 (20)dbj|BAF46296.1|4e-109cytochrome P450 [Ipomoea nil]555011815 (19)dbj|BAF46296.1|6e-47cytochrome P450 [Ipomoea nil]
JMFS099D07Sequence215011815 (19)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF034A01+ CACTACTACTACTACTACTAAGTTT
                      ____________________________________________________________
consensus CACTACTACTACTACTACTAAGTTT
 
. : . : . : . : . : . :
rJMFF038F10+ TTTAATGTTTGCAGGGAGAGATACAACCAGCTCAACTCTC
rJMFF020D23+ TTTAATGTTTGCAGGGAGAGATACAACCAGCTCAACTCTC
rJMFF029D03+ TTTAATGTTTGCAGGGAGAGATACANCCAGCTCAACTCTC
rJMFF034A01+ NTGAGGGACACTTTCTTGAGTTTAATGTTNGCAGGGAGAGATACAACCAGCTCAACTCTC
                      ____________________________________________________________
consensus NTGAGGGACACTTTCTTGAGTTTAATGTTTGCAGGGAGAGATACAACCAGCTCAACTCTC
 
. : . : . : . : . : . :
rJMFF038F10+ ACTTGGTTTTTCTACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF020D23+ ACTTGGTTTTTCTACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF009M10+ CCAAAACCCACTGGTTCAGGCAAAAGTCCGAGACGAG
rJMFF029D03+ ACTTGGTTTTTCTACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF034A01+ ACTTGGTTTTTCTACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF025G02+ ACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF026A08+ ACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF013J10+ CCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
rJMFF027A17+ GAGACGAG
rJMFF024P11+ AGGCAAACGCCCGAGACGAG
                      ____________________________________________________________
consensus ACTTGGTTTTTCTACCTGCTTGCCCAAAACCCATTGGTTCAGGCAAACGCCCGAGACGAG
 
. : . : . : . : . : . :
rJMFF038F10+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF020D23+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF009M10+ ATTGAAAACAAATTAAATCTAAAACAAGAGGACAAGCGGTTTTTCAAGGTGGAGGAATGC
rJMFF029D03+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF034A01+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF025G02+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF026A08+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF013J10+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF040A05+ AAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF027A17+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF034N08+ AAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
rJMFF014O07+ GAAGAATGC
rJMFF024P11+ ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
                      ____________________________________________________________
consensus ATTGAAAACAAATTGAATCTAAAACAAGAAATCAAGCGGTTTTTCAAGCTGGAAGAATGC
 
. : . : . : . : . : . :
rJMFF038F10+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF020D23+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF009M10+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGTCCCTCAGACTATTCCCGCCGGTG
rJMFF029D03+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF034A01+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF025G02+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF026A08+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF013J10+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF040A05+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF027A17+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF034N08+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF014O07+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
rJMFF024P11+ CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
                      ____________________________________________________________
consensus CACAAGTTAGTGTATCTACACGCTGCTCTGTGTGAGACCCTCAGATTATTCCCGCCGCTG
 
. : . : . : . : . : . :
rJMFF038F10+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF020D23+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF009M10+ GCCATTGAGCACAAGGTGTCGGCGGGGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF029D03+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF034A01+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF025G02+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF026A08+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF013J10+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF040A05+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF027A17+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF041H07+ AAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF034N08+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
rJMFF014O07+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCCNTAGTGGACATCTGGTCAA
rJMFF024P11+ GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCCTTAGTGGACATCTGGTCAA
rJMFF026N05+ GACATCTGGTCAA
                      ____________________________________________________________
consensus GCCATTCAGCACAAGGTGTCGACGGCGATGGACGTCCTCCC-TAGTGGACATCTGGTCAA
 
. : . : . : . : . : . :
rJMFF038F10+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF020D23+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF009M10+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCTGGAAGGATGGATTCAATATGGGG
rJMFF029D03+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF046G20+ GAAGGATGGATTCAATATGGGG
rJMFF034A01+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF025G02+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF026A08+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGGTTCAATATGGGG
rJMFF013J10+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF040A05+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF027A17+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF041H07+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF034N08+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF014O07+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF024P11+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF026N05+ GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
rJMFF045K09+ ATTCATCAGGAAGAATGGATTCAATATGGGG
                      ____________________________________________________________
consensus GCCCAACACCAGAATCATACTCTTATTTTATTCATCAGGAAGAATGGATTCAATATGGGG
 
. : . : . : . : . : . :
rJMFF038F10+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF020D23+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF009M10+ CGAAGATTGCATGGAGTTCAAGCCCGAGAGGTGGATTTCAGGCCAAGGAAGAATCAAGCA
rJMFF029D03+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF046G20+ CGAAGATTGCATGGAGTTCAAGCCCGAGAGGTGGATTTCAGGCCAAGGAAGAATCAAGCA
rJMFF034A01+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF025G02+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF026A08+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF013J10+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF040A05+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF027A17+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF041H07+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF034N08+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF014O07+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF024P11+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF009F07+ GCATGGAGTTCAAGCATGAGAGGTGGATTTCAGGCAACGGAAGAATCNAGCA
rJMFF026N05+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
rJMFF045K09+ TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
                      ____________________________________________________________
consensus TGAAGATTGCATGGAGTTCAAGCCTGAGAGGTGGATTTCAGGCAACGGAAGAATCAAGCA
 
. : . : . : . : . : . :
rJMFF038F10+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF020D23+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF009M10+ TGAGCCGTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF029D03+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF046G20+ TGAGCCGTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF034A01+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF025G02+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF026A08+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF013J10+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF040A05+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF027A17+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF041H07+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF034N08+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF014O07+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF024P11+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF009F07+ TGNANCCTCTTACAAGTTTCCGGCATTCANCGCCGGNCCCAGGANTTGTNTAGGTAAAGA
rJMFF026N05+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
rJMFF045K09+ TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
                      ____________________________________________________________
consensus TGAACCCTCTTACAAGTTTCCGGCATTCAACGCCGGACCCAGGACTTGTTTAGGTAAAGA
 
. : . : . : . : . : . :
rJMFF038F10+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF020D23+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF009M10+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF029D03+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF046G20+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF034A01+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF025G02+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF026A08+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF013J10+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF040A05+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF027A17+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF041H07+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF034N08+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF014O07+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF024P11+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF009F07+ AATGTCTNTTGTTCAGATGAAAATGATTGCNGNGATCATCCTCCATCATTANGAGTTTCA
rJMFF026N05+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
rJMFF045K09+ AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
                      ____________________________________________________________
consensus AATGTCTTTTGTTCAGATGAAAATGATTGCTGCGATCATCCTCCATCATTATGAGTTTCA
 
. : . : . : . : . : . :
rJMFF038F10+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF020D23+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF009M10+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF029D03+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF046G20+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF034A01+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF025G02+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF026A08+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF013J10+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF040A05+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF027A17+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF041H07+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF034N08+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF014O07+ AGTGGTGGATTCCCATTCAG-TTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF024P11+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF009F07+ AGTGGTGGATTNCCATTCAGTTTCTNCCAGNGATTCAATCATCATTCAAGATAAGCATGG
rJMFF026N05+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
rJMFF045K09+ AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
                      ____________________________________________________________
consensus AGTGGTGGATTCCCATTCAGTTTCTCCCAGCGATTCAATCATCATTCAAGCTAAGCATGG
 
. : . : . : . : . : . :
rJMFF038F10+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF020D23+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF009M10+ CTTGAAAGTCAAATTTACCAAACGTAGCATGTAATACATACATACT
rJMFF029D03+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF046G20+ CTTGAAAGTCAAATTTACCAAACGTAGCATGTAATACATACATACT
rJMFF034A01+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF025G02+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF026A08+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF013J10+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF040A05+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF027A17+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF041H07+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF034N08+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF014O07+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF024P11+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF009F07+ CTTGAAAGTCAAATTTACCANNNGTAGTATGTAATNCATNCATNCTGCATTTGTANGGCN
rJMFF026N05+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
rJMFF045K09+ CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
                      ____________________________________________________________
consensus CTTGAAAGTCAAATTTACCAAACGTAGTATGTAATACATACATACTGCATTTGTATGGCA
 
. : . : . : . : . : . :
rJMFF038F10+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF020D23+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF029D03+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF034A01+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF025G02+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF026A08+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF013J10+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF040A05+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF027A17+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF041H07+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF034N08+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF014O07+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF024P11+ CTGTACTGTTCTATACGAGCTAGTTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF009F07+ CTGTACTGTTNTATACGAGATAANTAAGCTTNTATNCCATGCAGTAAGNTAGNTTAAATT
rJMFF026N05+ CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
rJMFF045K09+ CTGTACTGTTCTATACGAGCTAGTTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
                      ____________________________________________________________
consensus CTGTACTGTTCTATACGAGCTAATTAAGCTTCTATCCCATGCAGTAAGCTAGCTTAAATT
 
. : . : . : . : . : . :
rJMFF038F10+ TACCAAAGGTACAATACTGAA
rJMFF020D23+ TACCAAAGGTACAATACTGA
rJMFF029D03+ TACCAAAGGTACAATAC
rJMFF034A01+ TACCAAAGGTACAATACTGAATGCATTC
rJMFF025G02+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTG
rJMFF026A08+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF013J10+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF040A05+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF027A17+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF041H07+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF034N08+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF014O07+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF024P11+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF009F07+ TACCAAAGGTACAATNNNGAATGCATTCAATGGTACTTCAATTCATAAGANTGGTGNTTG
rJMFF026N05+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
rJMFF045K09+ TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
                      ____________________________________________________________
consensus TACCAAAGGTACAATACTGAATGCATTCAATGGTACTTCAATTCATAAGACTTGTGTTTG
 
. : . : . : . : . : . :
rJMFF026A08+ TCTGTTTGTGATATGTAATTTTTTTAATTTGATGATACATTTATATA
rJMFF013J10+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAG
rJMFF040A05+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAG
rJMFF027A17+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAG
rJMFF041H07+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
rJMFF034N08+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
rJMFF014O07+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
rJMFF024P11+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
rJMFF009F07+ TCTGNTNGTAATATGTAATTTTNNTAATNTGATGATACANTTATATAGNGTATGTATCAT
rJMFF026N05+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
rJMFF045K09+ TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
JMFS099D07- AATTTGATGATACATTTATATAGTGTATGTATCAT
                      ____________________________________________________________
consensus TCTGTTTGTAATATGTAATTTTTTTAATTTGATGATACATTTATATAGTGTATGTATCAT
 
. : . : . : . : . : . :
rJMFF041H07+ CTGTTTGAC
rJMFF034N08+ CTGTTTGACATTATCTTTCCAGTAACGATATA
rJMFF014O07+ CTGTTTGACATTATCTTTCCAGTAACGAT
rJMFF024P11+ CTGTTTGACATTATCTTTCCAGTAACGATATATGACATCT
rJMFF009F07+ CTGTTCGACATTATCTCTCCAGTAACGATATA
rJMFF026N05+ CTGTTTGACATTATCTTTCCAGTAACGATATATGACATCT
rJMFF045K09+ CTGTTTGACATTATCTTTCCAGTAACGATATATGACATCTGCCAATTCCATTTTT
JMFS099D07- CTGTTTGACATTATCTTTCCAGTAACGATATATGACATCTGCCAATTCCATTTTTXXXXX
                      ____________________________________________________________
consensus CTGTTTGACATTATCTTTCCAGTAACGATATATGACATCTGCCAATTCCATTTTTNNNNN
 
. : . : . : . : . : . :
JMFS099D07- XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFS099D07- XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTCGGGGGGGGCCCCGGACCCAAATTCCCC
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGGGGGGGGCCCCGGACCCAAATTCCCC