Contig 011814:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS099C09Sequence497011814 (2)ref|XP_010647565.1|79.3PREDICTED: tobamovirus multiplication protein 1 [Vitis vinifera]
JMSF046N01Sequence762011814 (2)ref|XP_009621508.1|106PREDICTED: uncharacterized protein LOC104113114 [Nicotiana tomentosiformis]640020523ref|XP_006338273.1|169PREDICTED: uncharacterized protein LOC102581228 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF046N01+                                GGTATCAACAGCACTTCTGCCAGGGCCATAGATACCACC
                      ____________________________________________________________
consensus                                  GGTATCAACAGCACTTCTGCCAGGGCCATAGATACCACC
 
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JMSF046N01+           AAGTCGAAATACTTGTGAAGCGATCTCAAGGTCAAGACCTAACTGCAACCATCCTTCTTC
                      ____________________________________________________________
consensus             AAGTCGAAATACTTGTGAAGCGATCTCAAGGTCAAGACCTAACTGCAACCATCCTTCTTC
 
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JMSF046N01+           AGCGGCCAATCTAGCTCGGGCCGATTCAGTTGTAGCCCTTGCTGGAAATTCTTCATCTAC
                      ____________________________________________________________
consensus             AGCGGCCAATCTAGCTCGGGCCGATTCAGTTGTAGCCCTTGCTGGAAATTCTTCATCTAC
 
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JMSF046N01+           CCATGCACCGCTACAATCTCCATATACACCTACAAGTCAAGAAAGATAGGAGCTTTCCCT
                      ____________________________________________________________
consensus             CCATGCACCGCTACAATCTCCATATACACCTACAAGTCAAGAAAGATAGGAGCTTTCCCT
 
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JMSF046N01+           TGACATATTTTTGGGCAAACAGAAAATTGAGAGGAAATTTACGAGAAAGTCATACTAGTT
                      ____________________________________________________________
consensus             TGACATATTTTTGGGCAAACAGAAAATTGAGAGGAAATTTACGAGAAAGTCATACTAGTT
 
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JMSF046N01+           GATGACAAGTAGCCCAGCCACTGGAGGTCGCCACCTTTCAATCTATTATTAAGTAGTTTT
                      ____________________________________________________________
consensus             GATGACAAGTAGCCCAGCCACTGGAGGTCGCCACCTTTCAATCTATTATTAAGTAGTTTT
 
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JMSF046N01+           CTGTGTTGAAGCATGGGATCACCAGTGCCGGGAACAGGTGGAATGGAGATAAGAAGATGT
                      ____________________________________________________________
consensus             CTGTGTTGAAGCATGGGATCACCAGTGCCGGGAACAGGTGGAATGGAGATAAGAAGATGT
 
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JMSF046N01+           GAGTGACATTTCATGACATCTAGGACCTCTGGTCTCACAATGGATCTTTGGCATCAAACA
                      ____________________________________________________________
consensus             GAGTGACATTTCATGACATCTAGGACCTCTGGTCTCACAATGGATCTTTGGCATCAAACA
 
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JMSF046N01+           CAAATGCATCGTATCCCATTTCGTCCAGTTTCTTCTTCTTGGCAGCGCTAGTACACGTTC
                      ____________________________________________________________
consensus             CAAATGCATCGTATCCCATTTCGTCCAGTTTCTTCTTCTTGGCAGCGCTAGTACACGTTC
 
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JMSF046N01+           CAGATACAGTCCATCCTTTACTCTTCAAATCCGCAGCGAAGAACTCTCCGACGAAACCCA
                      ____________________________________________________________
consensus             CAGATACAGTCCATCCTTTACTCTTCAAATCCGCAGCGAAGAACTCTCCGACGAAACCCA
 
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JMSF046N01+           TTCCCAAAATGAACATTCGGCCTTGGAACTGGGTTTCCATAGTGGCGCAGGTGGGGTTCA
JMFS099C09-                                 TTGGAACTGGGTTTTCGTAGTGACGCAGGTGGGGTTCA
                      ____________________________________________________________
consensus             TTCCCAAAATGAACATTCGGCCTTGGAACTGGGTTTTCGTAGTGGCGCAGGTGGGGTTCA
 
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JMSF046N01+           GAGTGCATCTCACGTAGGGGAAACATGGC                               
JMFS099C09-           GAGTGCATCTCACGTTGGGGAAACATGGCTCAGGATGCAGAATATACAGAACATACAAGA
                      ____________________________________________________________
consensus             GAGTGCATCTCACGTTGGGGAAACATGGCTCAGGATGCAGAATATACAGAACATACAAGA
 
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JMFS099C09-           GTCGAAGGAAGAATCTCTGTTGTCATGTAATACACCAAACTCAGAACAAGGTGGTTCACA
                      ____________________________________________________________
consensus             GTCGAAGGAAGAATCTCTGTTGTCATGTAATACACCAAACTCAGAACAAGGTGGTTCACA
 
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JMFS099C09-           TCGTCAACCGTCGCAATATAGTTAAAACAAGACGCCACAACCATAAAGCACCGTACGAGG
                      ____________________________________________________________
consensus             TCGTCAACCGTCGCAATATAGTTAAAACAAGACGCCACAACCATAAAGCACCGTACGAGG
 
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JMFS099C09-           AAACAACTGAAACATATGACCGTCACACATCCATTCTCACGAGTCTTCCTTCTCTTCCCT
                      ____________________________________________________________
consensus             AAACAACTGAAACATATGACCGTCACACATCCATTCTCACGAGTCTTCCTTCTCTTCCCT