| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP004B08 | Sequence | 618 | 011811 (4) | ref|XP_006359540.1| | 3e-132 | PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum] | |||||
| JMFF033F19 | Sequence | 564 | 011811 (4) | ref|XP_006359540.1| | 3e-118 | PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum] | 717 | 002628 (2) | ref|XP_011084037.1| | 1e-83 | PREDICTED: transmembrane 9 superfamily member 11 [Sesamum indicum] |
| JMFF033H07 | Sequence | 515 | 011811 (4) | ref|XP_006359540.1| | 3e-106 | PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum] | 782 | 002628 (2) | ref|XP_010244791.1| | 317 | PREDICTED: transmembrane 9 superfamily member 4 [Nelumbo nucifera] |
| JMFS096G06 | Sequence | 627 | 011811 (4) | ref|XP_006359540.1| | 4e-134 | PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMCP004B08+ GGGTAAGGGGAA
____________________________________________________________
consensus GGGTAAGGGGAA
. : . : . : . : . : . :
rJMCP004B08+ CGGAGATGCAGAACCATAGCAGAATGAGAACAACAAACAGGGAGAATGAAATGGCTCCTG
____________________________________________________________
consensus CGGAGATGCAGAACCATAGCAGAATGAGAACAACAAACAGGGAGAATGAAATGGCTCCTG
. : . : . : . : . : . :
rJMCP004B08+ TACTTTGACTACCCCACAATAAGAAATTTAAAGTAGTGAGTATAAGGAATGAAATACCAG
____________________________________________________________
consensus TACTTTGACTACCCCACAATAAGAAATTTAAAGTAGTGAGTATAAGGAATGAAATACCAG
. : . : . : . : . : . :
rJMCP004B08+ GGAAGAAACAGGCAGCTTTCCATGAAACCGAAACCCAGCCCTTGTGATCACCGCAAAAGA
JMFF033F19+ ACCGCAAAAGA
JMFS096G06+ CCCAGCCCTTGTGATCACCGCAAAAGA
____________________________________________________________
consensus GGAAGAAACAGGCAGCTTTCCATGAAACCGAAACCCAGCCCTTGTGATCACCGCAAAAGA
. : . : . : . : . : . :
rJMCP004B08+ TTGTCCTCCAAAGACGAACAGCAACATAGCCAGCTGCAACACCAAGAATCGTGTAGATAA
JMFF033F19+ TTGTCCTCCAAAGACGAACAGCAACATAGCCAGCTGCAACACCAAGAATCATGTAGATAA
JMFF033H07+ ACACCAAGAATCATGTAGATAA
JMFS096G06+ TTGTCCTCCAAAGACGAACAGCAACATAGCCAGCTGCAACACCAAGAATCATGTAGATAA
____________________________________________________________
consensus TTGTCCTCCAAAGACGAACAGCAACATAGCCAGCTGCAACACCAAGAATCATGTAGATAA
. : . : . : . : . : . :
rJMCP004B08+ ACAGCATACCCGTAATCAATGTTCCACGCGAAGCTGGGGACATGAATCCAAGAGCAGCAA
JMFF033F19+ ACAGCATACCCGTAATCAATGTTCCACGCGAAGCTGGGGACATGAATCCAAGAGCAGCAA
JMFF033H07+ ACAGCATACCCGTAATCAATGTTCCACGCGAAGCTGGGGACATGAATCCAAGAGCAGCAA
JMFS096G06+ ACAGCATACCCGTAATCAATGTTCCACGCGAAGCTGGGGACATGAATCCAAGAGCAGCAA
____________________________________________________________
consensus ACAGCATACCCGTAATCAATGTTCCACGCGAAGCTGGGGACATGAATCCAAGAGCAGCAA
. : . : . : . : . : . :
rJMCP004B08+ ACAGAATAGTCACCACTGCCATTCCTAGGATCTGAACTCCATCTCCAACCATCACACACA
JMFF033F19+ ACAGAATAGTCACCACTGCCATTCCTAGGATCTGAACTCCATCTCCAACCATCACACACA
JMFF033H07+ ACAGAATAGTCACCACTGCCATTCCTAGGATCTGAACTCCATCTCCAACCATCACACACA
JMFS096G06+ ACAGAATAGTCACCACTGCCATTCCTAGGATCTGAACTCCATCTCCAACCATCACACACA
____________________________________________________________
consensus ACAGAATAGTCACCACTGCCATTCCTAGGATCTGAACTCCATCTCCAACCATCACACACA
. : . : . : . : . : . :
rJMCP004B08+ ACAATGCTGGATTACTTGGTGCTCGAAACACATCAGCAACAACAAGTTTCCACCCTGATA
JMFF033F19+ ACAATGCTGGATTACTTGGTGCTCGAAACACATCAGCAACAACAAGTTTCCACCCTGATA
JMFF033H07+ ACAATGCTGGATTACTTGGTGCTCGAAACACATCAGCAACAACAAGTTTCCACCCTGATA
JMFS096G06+ ACAATGCTGGATTACTTGGTGCTCGAAACACATCAGCAACAACAAGTTTCCACCCTGATA
____________________________________________________________
consensus ACAATGCTGGATTACTTGGTGCTCGAAACACATCAGCAACAACAAGTTTCCACCCTGATA
. : . : . : . : . : . :
rJMCP004B08+ ACTCCTCATTCATCTGGGCTTGGGCCTCTTTGTCAAGCTCCTCATACCTTGTGAGATCTC
JMFF033F19+ ACTCCTCATTCATCTGGGCTTGGGCCTCTTTGTCAAGCTCCTCATACCTTGTGAGATCTC
JMFF033H07+ ACTCCTCATTCATCTGGGCTTGGGCCTCTTTGTCAAGCTCCTCATACCTTGTGAGATCTC
JMFS096G06+ ACTCCTCATTCATCTGGGCTTGGGCCTCTTTGTCAAGCTCCTCATACCTTGTGAGATCTC
____________________________________________________________
consensus ACTCCTCATTCATCTGGGCTTGGGCCTCTTTGTCAAGCTCCTCATACCTTGTGAGATCTC
. : . : . : . : . : . :
rJMCP004B08+ GTCTAACAGTCCTCAAGAAGATCACAAGCACAATTCCAGCTAAGAAAGTAATAACCATGA
JMFF033F19+ GTCTAACAGTCCTCAAGAAGATCACAAGCACAATTCCAGCTAAGAAAGTAATAACCATGA
JMFF033H07+ GTCTAACAGTCCTCAAGAAGATCACAAGCACAATTCCAGCTAAGAAAGTAATAACCATGA
JMFS096G06+ GTCTAACAGTCCTCAAGAAGATCACAAGCACAATTCCAGCTAAGAAAGTAATAACCATGA
____________________________________________________________
consensus GTCTAACAGTCCTCAAGAAGATCACAAGCACAATTCCAGCTAAGAAAGTAATAACCATGA
. : . : . : . : . : . :
rJMCP004B08+ GAGAGTTGAGAATAGAGAACCAGTGCACCTTTGCCCCCTCCATCTTCAAATATGCATCCC
JMFF033F19+ GAGAGTTGAGAATAGAGAACCAGTGCACCTTTGCCCCCTCCATCTTCAAATATGCATCCC
JMFF033H07+ GAGAGTTGAGAATAGAGAACCAGTGCACCTTTGCCCCCTCCATCTTCAAATATGCATCCC
JMFS096G06+ GAGAGTTGAGAATAGAGAACCAGTGCACCTTTGCCCCCTCCATCTTCAAATATGCATCCC
____________________________________________________________
consensus GAGAGTTGAGAATAGAGAACCAGTGCACCTTTGCCCCCTCCATCTTCAAATATGCATCCC
. : . : . : . : . : . :
rJMCP004B08+ ACCTCG
JMFF033F19+ ACCTCGATGGCAACTTGATATCACTCCCAACAAAGTTGACCTCATACGAAAAGGCCACAG
JMFF033H07+ ACCTCGATGGCAACTTGATATCACTCTCAACAAAGTTGACCTCATACGAAAAGGCCACAG
JMFS096G06+ ACCTCGATGGCCACTTGATATCACTCTCAACAAAGTTGACCTCATACGAAAAGGCCACAG
____________________________________________________________
consensus ACCTCGATGGCAACTTGATATCACTCTCAACAAAGTTGACCTCATACGAAAAGGCCACAG
. : . : . : . : . : . :
JMFF033F19+ GTTCACTTTCTTTAATAGCCATACCAACTGTAGTAGGATCACACTTAATTGGAGATGGGT
JMFF033H07+ GTTCACTTTCTTTAATAGCCATTCCAACTGTAGTAGGATCACACTTAATTGGAGATGGGT
JMFS096G06+ GTTCACTTTCTTTAATAGCCATTCCAACTGTAGTAGGATCACACTTAATTGGAGATGGGT
____________________________________________________________
consensus GTTCACTTTCTTTAATAGCCATTCCAACTGTAGTAGGATCACACTTAATTGGAGATGGGT
. : . : . : . : . : . :
JMFF033F19+ ATTTACCATACAT
JMFF033H07+ ATTTACCATACAT
JMFS096G06+ ATTTACCATACATCTTCAAGTTCTTCAATGACTCGGCATTGTGCTGGAAACTACAAGGGA
____________________________________________________________
consensus ATTTACCATACATCTTCAAGTTCTTCAATGACTCGGCATTGTGCTGGAAACTACAAGGGA