| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012E23 | Sequence | 544 | 000055 (14) | ref|XP_004252209.1| | 7e-25 | PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum] | 739 | 011808 (3) | ref|XP_010910799.1| | 2e-47 | PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2 [Elaeis guine |
| JMFF020N20 | Sequence | 538 | 000055 (14) | ref|XP_004252209.1| | 6e-25 | PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum] | 708 | 011808 (3) | ref|XP_010910799.1| | 1e-47 | PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2 [Elaeis guine |
| JMFS092G11 | Sequence | 627 | 011808 (3) | gb|EPS71775.1| | 5e-131 | hypothetical protein M569_02982, partial [Genlisea aurea] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF012E23+ CTGGAAGT
____________________________________________________________
consensus CTGGAAGT
. : . : . : . : . : . :
rJMFF012E23+ CCATCGTTGAAGTTTGCACTTAAATTAGTTTTTGTGTATTGAATTTTGTCGCAGGTGCGA
rJMFF020N20+ GTCGCAGGTGCGA
____________________________________________________________
consensus CCATCGTTGAAGTTTGCACTTAAATTAGTTTTTGTGTATTGAATTTTGTCGCAGGTGCGA
. : . : . : . : . : . :
rJMFF012E23+ TATTTGCTCCTGGGAGGAGTTAAATGTCGTACACTGTGCTGCTGCCTTCTTTTATGGGCT
rJMFF020N20+ TATTTGCTCCTGGGAGGAGTTAAATGTCGTACACTGTGCTGCTGCCTTCTTTTATGGGCT
____________________________________________________________
consensus TATTTGCTCCTGGGAGGAGTTAAATGTCGTACACTGTGCTGCTGCCTTCTTTTATGGGCT
. : . : . : . : . : . :
rJMFF012E23+ TTCATGTCTTTGGAGTGCCCTTATTTGGTGGACCAATTTTTATGAAGGGCCTTCTGGATC
rJMFF020N20+ TTCATGTCTTTGGAGTGCCCTTATTTGGTGGACCAATTTTTATGAAGGGCCTTCTGGATC
____________________________________________________________
consensus TTCATGTCTTTGGAGTGCCCTTATTTGGTGGACCAATTTTTATGAAGGGCCTTCTGGATC
. : . : . : . : . : . :
rJMFF012E23+ ATCCATGTTCGTGGCCGGGACTGCTGTTGGTGATGATTCTTCTTCTTGATGTGGCCACTC
rJMFF020N20+ ATCCATGTTCGTGGCCGGGACTGCTGTTGGTGATGATTCTTCTTCTTGATGTGGCCACTC
____________________________________________________________
consensus ATCCATGTTCGTGGCCGGGACTGCTGTTGGTGATGATTCTTCTTCTTGATGTGGCCACTC
. : . : . : . : . : . :
rJMFF012E23+ TAATAAGTCAACCGCAAACCGTTGAAAAAAATGTGAAGCTTGTATTTCCATTGATGGGGT
rJMFF020N20+ TAATAAGTCAACCGCAAACCGTTGAAAAAAATGTGAAGCTTGTATTTCCATTGATGGGGT
____________________________________________________________
consensus TAATAAGTCAACCGCAAACCGTTGAAAAAAATGTGAAGCTTGTATTTCCATTGATGGGGT
. : . : . : . : . : . :
rJMFF012E23+ TGTGAATTTGTTCATTTCTAGGTATATCAAGCTGGGTTTTCAGCTCCTACACCAATACAG
rJMFF020N20+ TGTGAATTTGTTCATTTCTAGGTATATCAAGCTGGGTTTTCAGCTCCTACACCAATACAG
____________________________________________________________
consensus TGTGAATTTGTTCATTTCTAGGTATATCAAGCTGGGTTTTCAGCTCCTACACCAATACAG
. : . : . : . : . : . :
rJMFF012E23+ GCTCAGTCATGGCCTGTTGCTCTTCAAGGGCGAGATATTGTAGCTATTGCAAAGACTGGT
rJMFF020N20+ GCTCAGTCATGGCCTGTTGCTCTTCAAGGGCGAGATATTGTAGCTATTGCAAAGACTGGT
____________________________________________________________
consensus GCTCAGTCATGGCCTGTTGCTCTTCAAGGGCGAGATATTGTAGCTATTGCAAAGACTGGT
. : . : . : . : . : . :
rJMFF012E23+ TCTGGAAAAACCTTGGGCTATCTAATTCCTGGCTTTATACATCTAAAACAGCGCCGTAAC
rJMFF020N20+ TCTGGAAAAACCTTGGGCTATCTAATTCCTGGCTTTATACATCTAAAACAGCGCCGTAAC
JMFS092G11- TTTATACATCTAAAACAGCGCCGTAAC
____________________________________________________________
consensus TCTGGAAAAACCTTGGGCTATCTAATTCCTGGCTTTATACATCTAAAACAGCGCCGTAAC
. : . : . : . : . : . :
rJMFF012E23+ AATTCTCGATTGGGTCCGACTGTATTGGTTTTGTCACCAACAAGGGAGTTGGCAACACAG
rJMFF020N20+ AATTCTCGATTGGGTCCGACTGTATTGGTTTTGTCACCAACAAGGGAGTTGGCAACACAG
JMFS092G11- AATTCTCGATTGGGTCCGACTGTATTGGTTTTGTCACCAACAAGGGAGTTGGCAACACAG
____________________________________________________________
consensus AATTCTCGATTGGGTCCGACTGTATTGGTTTTGTCACCAACAAGGGAGTTGGCAACACAG
. : . : . : . : . : . :
rJMFF012E23+ ATACAAGATGAAGCTGTGAAGTTCAGTAAATCTTACCAGATTTCATGCACG
rJMFF020N20+ ATACAAGATGAAGCTGTGAAGTTCAGTAAATCTTACCAGATTTCATGCACG
JMFS092G11- ATACAAGATGAAGCTGTGAAGTTCAGTAAATCTTACCAGATTTCATGCACGTGTCTATAT
____________________________________________________________
consensus ATACAAGATGAAGCTGTGAAGTTCAGTAAATCTTACCAGATTTCATGCACGTGTCTATAT
. : . : . : . : . : . :
JMFS092G11- GGAGGGGCAGCAAAAGGTCCACAGTTAAGGGATTTAGATAGAGGGGTAGATATTGTGGTG
____________________________________________________________
consensus GGAGGGGCAGCAAAAGGTCCACAGTTAAGGGATTTAGATAGAGGGGTAGATATTGTGGTG
. : . : . : . : . : . :
JMFS092G11- GCTACTCCTGGTCGGTTAAATGACATTCTGGAAATGCGAAGGGTTAGCCTTAACCAAGTT
____________________________________________________________
consensus GCTACTCCTGGTCGGTTAAATGACATTCTGGAAATGCGAAGGGTTAGCCTTAACCAAGTT
. : . : . : . : . : . :
JMFS092G11- TCATACTTGGTATTAGATGAAGCAGATCGTATGCTGGACATGGGCTTTGAACCTCAGATA
____________________________________________________________
consensus TCATACTTGGTATTAGATGAAGCAGATCGTATGCTGGACATGGGCTTTGAACCTCAGATA
. : . : . : . : . : . :
JMFS092G11- AGGAAGATAGTGAAGGAGGTGCCTACTCGGCGACAGACTCTTATGTACACAGCAACATGG
____________________________________________________________
consensus AGGAAGATAGTGAAGGAGGTGCCTACTCGGCGACAGACTCTTATGTACACAGCAACATGG
. : . : . : . : . : . :
JMFS092G11- CCAAAGGAGGTCCGGAAAATAGCTGCTGATCTACTGATAAATCCTGTCCAGGTTAACATT
____________________________________________________________
consensus CCAAAGGAGGTCCGGAAAATAGCTGCTGATCTACTGATAAATCCTGTCCAGGTTAACATT
. : . : . : . : . : . :
JMFS092G11- GGGAATGTTGATGAGCTTGTAGCAAACAAGTCTATAACACAGTATGTTGAAGTGTTGCCA
____________________________________________________________
consensus GGGAATGTTGATGAGCTTGTAGCAAACAAGTCTATAACACAGTATGTTGAAGTGTTGCCA
. : . : . : . : . : . :
JMFS092G11- CAAACGGATAAGCGCCGGAGACTGGAACAGATATTGAGATCCCAAGAGCAAGGATCAAAA
____________________________________________________________
consensus CAAACGGATAAGCGCCGGAGACTGGAACAGATATTGAGATCCCAAGAGCAAGGATCAAAA
. : . : . : . : . : . :
JMFS092G11- GTTATCATTTTTTGTTCAACANAGAAGATGTGCAATCTACTTTCTGGTAACCTTACCCGT
____________________________________________________________
consensus GTTATCATTTTTTGTTCAACANAGAAGATGTGCAATCTACTTTCTGGTAACCTTACCCGT