Contig 011807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011D04Sequence639011807 (3)ref|XP_006357053.1|3e-38PREDICTED: sporulation-specific protein 15-like isoform X4 [Solanum tuberosum]
JMFN043B12Sequence480011807 (3)
JMFS092D05Sequence605011807 (3)ref|XP_009630992.1|6e-73PREDICTED: golgin subfamily B member 1 isoform X4 [Nicotiana tomentosiformis] r

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN043B12+ CTACAATATCTTATAATTAAA
                      ____________________________________________________________
consensus CTACAATATCTTATAATTAAA
 
. : . : . : . : . : . :
JMFN043B12+ TTCAGATGATCTATTCAATGTGCCTGAACGGATGATAAGGCAACAAAATTAGTTGCCATA
JMFN011D04+ AGATGATCTATTCAATGTGCCTGAACGGATGATAAGGCAACAAAATTAGTTGCCATA
                      ____________________________________________________________
consensus TTCAGATGATCTATTCAATGTGCCTGAACGGATGATAAGGCAACAAAATTAGTTGCCATA
 
. : . : . : . : . : . :
JMFN043B12+ TTACATAATGCAGCCTCACAGAATTTGTATAAAACCTATGATAAAGGGACAATAATCCTA
JMFN011D04+ TTACATAATGCAGCCTCACAGAATTTGTATAAAACCTATGATAAAGGGACAATAATCCTA
                      ____________________________________________________________
consensus TTACATAATGCAGCCTCACAGAATTTGTATAAAACCTATGATAAAGGGACAATAATCCTA
 
. : . : . : . : . : . :
JMFN043B12+ CTGCTGCCAACAAAATCTCAAGCTATATACCCTACAGGCTACAGCTAAGGTTTTCCTTAT
JMFN011D04+ CTGCTGCCAACAAAATCTCAAGCTATATACCCTACAGGCTACAGCTAAGGTTTTCCTTAT
                      ____________________________________________________________
consensus CTGCTGCCAACAAAATCTCAAGCTATATACCCTACAGGCTACAGCTAAGGTTTTCCTTAT
 
. : . : . : . : . : . :
JMFN043B12+ TGTATGAAACCAGGATGATCCTGTCATTTGTGACCGCACAAAATAACAGTTCCTGGTTTG
JMFN011D04+ TGTATGAAACCAGGATGATCCTGTCATTTGTGACCGCACAAAATAACAGTTCCTGGTTTG
                      ____________________________________________________________
consensus TGTATGAAACCAGGATGATCCTGTCATTTGTGACCGCACAAAATAACAGTTCCTGGTTTG
 
. : . : . : . : . : . :
JMFN043B12+ ACCAAAATAATGAATTTCCCAATCACATTTAACCAACAGACAAAAAAAGGTTGGTGACAC
JMFN011D04+ ACCAAAATAATGAATTTCCCAATCACATTTAACCAACAGACAAAAAAAGGTTGGTGACAC
                      ____________________________________________________________
consensus ACCAAAATAATGAATTTCCCAATCACATTTAACCAACAGACAAAAAAAGGTTGGTGACAC
 
. : . : . : . : . : . :
JMFN043B12+ AGAAAGGAAGTATTAACACATTGGAATTGTCATGTTCGGGGGTCGCTGCTACCAAATGGA
JMFN011D04+ AGAAAGGAAGTATTAACACATTGGAATTGTAATGTTCGGGGGTCGCTGCTACCAAATGGA
JMFS092D05+ AGTATTCACACATTGGAATTGTCATGTTCGGGGGTCGCTGCTACCAAATGGA
                      ____________________________________________________________
consensus AGAAAGGAAGTATTAACACATTGGAATTGTCATGTTCGGGGGTCGCTGCTACCAAATGGA
 
. : . : . : . : . : . :
JMFN043B12+ AACAAGACGGGAACCTGAACCTGCACAGTTTCTCATACAACAAAGGTTGCAAGAAGAGCA
JMFN011D04+ AACAAGACGGGAACCTGAACCTGCACAGTTTCTCATACAACAAAGGTTGCAAGAAGAGCA
JMFS092D05+ AACAAGACGGGAACCTGAACCTGCACAGTTTCTCATACAACAAAGGTTGCAAGAAGAGCA
                      ____________________________________________________________
consensus AACAAGACGGGAACCTGAACCTGCACAGTTTCTCATACAACAAAGGTTGCAAGAAGAGCA
 
. : . : . : . : . : . :
JMFN043B12+ TGTAACACGGCCCAATACAATATTACACCAAGCCGCAAA
JMFN011D04+ TGTAACACGGCCCAATACAATATTACACCAAGCCGCAAAGCAGGTTGTCGCATTAGAGTC
JMFS092D05+ TGTAACACGGCCCAATACAATATTACACCAAGCCGCAAAGCAGGTTGTCGCATTAGAGTC
                      ____________________________________________________________
consensus TGTAACACGGCCCAATACAATATTACACCAAGCCGCAAAGCAGGTTGTCGCATTAGAGTC
 
. : . : . : . : . : . :
JMFN011D04+ CGATCACAAGATACCCATAAACCATCTACCATGTCAGTCAATGGTCTTGTAAACTTTGGT
JMFS092D05+ CGATCACAAGATACCCATAAACCATCTACCATGTCAGTCAATGGTCTTGTAAACTTTGGT
                      ____________________________________________________________
consensus CGATCACAAGATACCCATAAACCATCTACCATGTCAGTCAATGGTCTTGTAAACTTTGGT
 
. : . : . : . : . : . :
JMFN011D04+ ACAACTCTTGAGGTAGTTAACGACTTGAAACCATGTGCCTTATCATCATCTTCGTCTTCA
JMFS092D05+ ACAACTCTTGAGGTAGTTAACGACTTGAAACCATGTGCCTTATCATCATCTTCGTCTTCA
                      ____________________________________________________________
consensus ACAACTCTTGAGGTAGTTAACGACTTGAAACCATGTGCCTTATCATCATCTTCGTCTTCA
 
. : . : . : . : . : . :
JMFN011D04+ AGCTCCCTACCATCAGGATTCACATCTACAGCAATGGCAACA
JMFS092D05+ AGCTCCCTACCATCAGGATTCACATCTACAGCAATGGCAACATGATCATTGTTGGTTTTG
                      ____________________________________________________________
consensus AGCTCCCTACCATCAGGATTCACATCTACAGCAATGGCAACATGATCATTGTTGGTTTTG
 
. : . : . : . : . : . :
JMFS092D05+ CGCAAACTGCGAACTTGAGAAGTGACTGTCCCAGGTGTGTCCCACTTGTTCAGAGGTTCT
                      ____________________________________________________________
consensus CGCAAACTGCGAACTTGAGAAGTGACTGTCCCAGGTGTGTCCCACTTGTTCAGAGGTTCT
 
. : . : . : . : . : . :
JMFS092D05+ ATTTCCACAATCTCAGAGCTTGTACTAGTTACACGTCCAGGGTCTCCAGCACCTCTTAGT
                      ____________________________________________________________
consensus ATTTCCACAATCTCAGAGCTTGTACTAGTTACACGTCCAGGGTCTCCAGCACCTCTTAGT
 
. : . : . : . : . : . :
JMFS092D05+ ATGGCCAATTGAGCATCCTTTTCATGTAAGGAACTCTCAAGGATATCTTCTTTACTCATC
                      ____________________________________________________________
consensus ATGGCCAATTGAGCATCCTTTTCATGTAAGGAACTCTCAAGGATATCTTCTTTACTCATC
 
. : . : . : . : . : . :
JMFS092D05+ AGTTCTTCCACTTTAGCTTTCTCAGATTGCAACAGCAGATCCTTGCTTTGTGTTGCAACA
                      ____________________________________________________________
consensus AGTTCTTCCACTTTAGCTTTCTCAGATTGCAACAGCAGATCCTTGCTTTGTGTTGCAACA