Contig 011805:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS089A06Sequence627011805 (2)ref|XP_004248755.1|2e-30PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X2 [Solanum lycopersicum] r
JMSF027P21Sequence628011805 (2)ref|XP_009777958.1|1e-35PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana sylvestris]741002882 (2)ref|XP_009760514.1|3e-81PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF027P21+                                                  AGATTGCCAGCATATTGACTG
                      ____________________________________________________________
consensus                                                    AGATTGCCAGCATATTGACTG
 
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JMSF027P21+           CCACNTCGTTCATGAATGAAATTGTTAGAAGGCTCAAATCCCCTTTCTTCTAACCTTGGA
JMFS089A06+                                                                   TGGA
                      ____________________________________________________________
consensus             CCACNTCGTTCATGAATGAAATTGTTAGAAGGCTCAAATCCCCTTTCTTCTAACCTTGGA
 
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JMSF027P21+           TCAGGCTCATTAGCTACAGCATAATTGGTTGATGAAGATGACCAACCATGCCCTATATTC
JMFS089A06+           TCAGGCTCATTAGCTACAGCATAATTGGTTGATGAAGATGACCAACCATGCCCTATATTC
                      ____________________________________________________________
consensus             TCAGGCTCATTAGCTACAGCATAATTGGTTGATGAAGATGACCAACCATGCCCTATATTC
 
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JMSF027P21+           AAATCACTGCCAAAAACACGATCATTTGAATTTGCAGTGGAACTAGACTCACCTTGATCC
JMFS089A06+           AAATCACTGCCAAAAACACGATCATTTGAATTTGCAGTGGAACTAGACTCACCTTGATCC
                      ____________________________________________________________
consensus             AAATCACTGCCAAAAACACGATCATTTGAATTTGCAGTGGAACTAGACTCACCTTGATCC
 
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JMSF027P21+           CAGCCACTGAAACTTGGTGCACAATCAGCATTTCTGCCGCCAACAGCAACCATCGAGTTT
JMFS089A06+           CAGCCACTGAAACTTGGTGCACAATCAGCATTTCTGCCGCCAACAGCAACCATCGAGTTT
                      ____________________________________________________________
consensus             CAGCCACTGAAACTTGGTGCACAATCAGCATTTCTGCCGCCAACAGCAACCATCGAGTTT
 
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JMSF027P21+           GAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAGGGCTTGACTGATCCATGGAA
JMFS089A06+           GAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAGGGCTTGACTGATCCATGGAA
                      ____________________________________________________________
consensus             GAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAGGGCTTGACTGATCCATGGAA
 
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JMSF027P21+           GCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCTCAGGAAATGAATCCAAAATA
JMFS089A06+           GCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCTCAGGAAATGAATCCAAAATA
                      ____________________________________________________________
consensus             GCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCTCAGGAAATGAATCCAAAATA
 
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JMSF027P21+           CTTCTCCTCCTTTGCATCTGTTCCACTTAGATCTCCTGATTCCCAAGGCAGCAAATTGAA
JMFS089A06+           CTTCTCCTCCTTTGCATCTGTTCCACTTAGATCTCCTGATTCCCAAGGCAGCAAATTGAA
                      ____________________________________________________________
consensus             CTTCTCCTCCTTTGCATCTGTTCCACTTAGATCTCCTGATTCCCAAGGCAGCAAATTGAA
 
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JMSF027P21+           TTCAATTCCCAAGTCAATCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAAC
JMFS089A06+           TTCAATTCCCAAGTCAATCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAAC
                      ____________________________________________________________
consensus             TTCAATTCCCAAGTCAATCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAAC
 
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JMSF027P21+           ACTTCCTCGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTC
JMFS089A06+           ACTTCCTCGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTC
                      ____________________________________________________________
consensus             ACTTCCTCGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTC
 
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JMSF027P21+           CTGAGCAGCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCGGTTTTGT
JMFS089A06+           CTGAGCAGCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCGGTTTTGT
                      ____________________________________________________________
consensus             CTGAGCAGCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCGGTTTTGT
 
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JMSF027P21+           GTGTGT                                                      
JMFS089A06+           GTGTGTGTGTGAGTGCGCGATGGAGAAGACGGCGAGGTGACGACAGGCAGCGAAGTTCCG
                      ____________________________________________________________
consensus             GTGTGTGTGTGAGTGCGCGATGGAGAAGACGGCGAGGTGACGACAGGCAGCGAAGTTCCG