Contig 011798:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023E12Sequence562011798 (10)ref|XP_009788495.1|1e-104PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS025E05Sequence639011798 (10)ref|XP_009788495.1|5e-87PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS027B06Sequence616011798 (10)ref|XP_009597265.1|8e-79PREDICTED: chaperone protein ClpB1 [Nicotiana tomentosiformis]
JMFS030D02Sequence588011798 (10)ref|XP_009788495.1|1e-79PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS047F03Sequence613011798 (10)ref|XP_009788495.1|6e-81PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS063G07Sequence620011798 (10)ref|XP_009788495.1|4e-87PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS075H12Sequence625011798 (10)ref|XP_009788495.1|6e-81PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS078B07Sequence616011798 (10)ref|XP_009788495.1|6e-81PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]
JMFS131E12Sequence611011798 (10)ref|XP_009597265.1|3e-64PREDICTED: chaperone protein ClpB1 [Nicotiana tomentosiformis]
JMFS154A02Sequence600011798 (10)ref|XP_009788495.1|3e-117PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS154A02+                           ATAAGCTTAACATCAGCAAGGTTACTCGGGACATCGCCCCGGAC
                      ____________________________________________________________
consensus                             ATAAGCTTAACATCAGCAAGGTTACTCGGGACATCGCCCCGGAC
 
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JMFS154A02+           AATTCTTTGTGCTAATCCTTCAACAACAGCTGTTTTTCCCACCCCGGGCTCTCCAATGAG
                      ____________________________________________________________
consensus             AATTCTTTGTGCTAATCCTTCAACAACAGCTGTTTTTCCCACCCCGGGCTCTCCAATGAG
 
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JMFS154A02+           GACCGGATTGTTCTTCGTTCGCCTCGAAAGGATCCTAACAACTCTTCGAATCTCTTCGTC
JMFS023E12+                                      AAGGATCCTAACAACTCTTCGAATCTCTTCGTC
                      ____________________________________________________________
consensus             GACCGGATTGTTCTTCGTTCGCCTCGAAAGGATCCTAACAACTCTTCGAATCTCTTCGTC
 
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JMFS154A02+           TCTACCGATCACGGGATCAAGTTTTCCGGCCTGCTCCACCAGATCACGGCCGTACGTTTT
JMFS023E12+           TCTACCGATCACGGGATCAAGTTTTCCGGCCTGCTCCACCAGATCACGGCCGTACGTTTT
                      ____________________________________________________________
consensus             TCTACCGATCACGGGATCAAGTTTTCCGGCCTGCTCCACCAGATCACGGCCGTACGTTTT
 
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JMFS154A02+           CAGTGCTTGGAAAGTAGAATCTCCAGAAGCACTCTCCACTTTCCTCCCTTCCTTTCCTCG
JMFS023E12+           CAGTGCTTGGAAAGTAGAATCTCCAGAAGCACTCTCCACTTTCCTCCCTTCCTTTCCTCG
JMFS063G07+                  TGGAAAGTAGAATCTCCAGAAGCACTCTCCACTTTCCTCCCTTCCTTTCCTCG
JMFS025E05+                  TGGAAAGTAGAATCTCCAGAAGCACTCTCCACTTTCCTCCCTTCCTTTCCTCG
JMFS030D02+                                                ACTTTCCTCCCTTCCTTTCCTCG
JMFS131E12+                                                        CCCTTCCTTTCCTCG
JMFS047F03+                                              CCACTTTCCTCCCTTCCTTTCCTCG
JMFS027B06+                                              CCACTTTCCTCCCTCCTTTTCCTNG
JMFS078B07+                                              CCACTTTCCTCCCTTCCTTTCCTCG
JMFS075H12+                                              CCACTTTCCTCCCTTCCTTTCCTCG
                      ____________________________________________________________
consensus             CAGTGCTTGGAAAGTAGAATCTCCAGAAGCACTCTCCACTTTCCTCCCTTCCTTTCCTCG
 
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JMFS154A02+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS023E12+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS063G07+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS025E05+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS030D02+           CAGTTTCTCTACCTNCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS131E12+           CAGCTTCTCTACCTCGATTTTAACCCTAGCAGAGCTAATTCCGGC-TCCCTCAAAAGGTC
JMFS047F03+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS027B06+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS078B07+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
JMFS075H12+           CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
                      ____________________________________________________________
consensus             CAGCTTCTCTACCTCCGATTTAACCCTAGCAGAGCTAATTCCGGCTTCCTTCAAAAGGTC
 
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JMFS154A02+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS023E12+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS063G07+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS025E05+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS030D02+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS131E12+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS047F03+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS027B06+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS078B07+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
JMFS075H12+           TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
                      ____________________________________________________________
consensus             TCCGACCTGAGAATCCTCCAAAAGCCCCAAAATCAACTGATCAACTGCCAAATGCGAGTC
 
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JMFS154A02+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS023E12+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS063G07+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS025E05+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTAATCAGCGACGTGCTGGC
JMFS030D02+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS131E12+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS047F03+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS027B06+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS078B07+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
JMFS075H12+           CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
                      ____________________________________________________________
consensus             CTGGCGGGCCTTCTGCAGCGCCTGTGCTCGCCGGATCACCTTGATCAGCGACGTGCTGGC
 
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JMFS154A02+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS023E12+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS063G07+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS025E05+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS030D02+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS131E12+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS047F03+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS027B06+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS078B07+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
JMFS075H12+           CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
                      ____________________________________________________________
consensus             CGGGATTTCGTCCGGCGGTGGGGTCTGCGCCGGCAGTTTCTTCATTGCTTGATTGAACAC
 
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JMFS154A02+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS023E12+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS063G07+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS025E05+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS030D02+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS131E12+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS047F03+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS027B06+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS078B07+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
JMFS075H12+           CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
                      ____________________________________________________________
consensus             CCTCTGGACCGAGTTCGCCGTTTCCTCGCTGCTACTGGCATTGACGATGGCTTGCCGGAA
 
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JMFS154A02+           AATTCCATTGTGGTCT                                            
JMFS023E12+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS063G07+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS025E05+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS030D02+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS131E12+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS047F03+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS027B06+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS078B07+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
JMFS075H12+           AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
                      ____________________________________________________________
consensus             AATTCCATTGTGGTCTGACAGCAAGGCCACGGCTATATGCAGAGGCGTAAATTGTGCATG
 
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JMFS023E12+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTC           
JMFS063G07+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS025E05+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS030D02+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS131E12+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS047F03+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS027B06+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS078B07+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
JMFS075H12+           CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
                      ____________________________________________________________
consensus             CCCTGCATTCATAGCCAGCCCATGAGCCTCGGCAAGGATCTCATTGGTCTTGTAGGTGAA
 
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JMFS063G07+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS025E05+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS030D02+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS131E12+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS047F03+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS027B06+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS078B07+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
JMFS075H12+           CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
                      ____________________________________________________________
consensus             CTTTTCTGGGTTCATTCTAATCACTCTTCTTTAAACACTAAAAGCAAAAACCTTGCGAAT
 
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JMFS063G07+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS025E05+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS030D02+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS131E12+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS047F03+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS027B06+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS078B07+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
JMFS075H12+           TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
                      ____________________________________________________________
consensus             TGCGATGAATGAATATTGGGTAGTGGGGTTTTCTCCTTGGCGAAAATCTAAGCGGCTGTT
 
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JMFS063G07+           TGTCTTGAACGAAGTTGATTATGA                                    
JMFS025E05+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGA               
JMFS030D02+           TGTCTTGAACGAAGTTGATTATGAG                                   
JMFS131E12+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAA             
JMFS047F03+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAAA            
JMFS027B06+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAAA            
JMFS078B07+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAAA            
JMFS075H12+           TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAAATCTTTTTGTTTT
                      ____________________________________________________________
consensus             TGTCTTGAACGAAGTTGATTATGAGATTTTGCAGTGGGATTTTGAAAATCTTTTTGTTTT