Contig 011796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS073F09Sequence627011796 (2)ref|XP_004232198.1|4e-26PREDICTED: probable serine/threonine-protein kinase At1g54610 [Solanum lycopers
JMFS143E02Sequence626011796 (2)ref|XP_006350168.1|2e-10PREDICTED: probable serine/threonine-protein kinase At1g09600-like [Solanum tub

Alignment

This contig is upended


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JMFS143E02+                                            GCGCCTATTCAAGTTAAACATCTCTGC
                      ____________________________________________________________
consensus                                              GCGCCTATTCAAGTTAAACATCTCTGC
 
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JMFS143E02+           AGAAACGTGATCTTCGAACTGATTGAGCTGCCTGGCCATCCTGCCTTTTATGTCCCCGGT
                      ____________________________________________________________
consensus             AGAAACGTGATCTTCGAACTGATTGAGCTGCCTGGCCATCCTGCCTTTTATGTCCCCGGT
 
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JMFS143E02+           ATGTTAATGGTCCTGAGAACGCCCGCCCATCAGAGTCTACTGATTGCTCGCGTGAATGAT
                      ____________________________________________________________
consensus             ATGTTAATGGTCCTGAGAACGCCCGCCCATCAGAGTCTACTGATTGCTCGCGTGAATGAT
 
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JMFS143E02+           ATAAATCGGGTGACAGAAAAGGCGGTGGTTGTTCCTCCACTGATAACTCCTTTGAGAAGT
                      ____________________________________________________________
consensus             ATAAATCGGGTGACAGAAAAGGCGGTGGTTGTTCCTCCACTGATAACTCCTTTGAGAAGT
 
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JMFS143E02+           GATATATATCTGGCGAGTGGAACGACAAAGGTTGCTCCACCTGCTTCATACTCTTCGGCC
JMFS073F09+                                            GCTCCACCTGCTTCATACTCTTCGGCC
                      ____________________________________________________________
consensus             GATATATATCTGGCGAGTGGAACGACAAAGGTTGCTCCACCTGCTTCATACTCTTCGGCC
 
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JMFS143E02+           GAATAGCCAAGCCACCGTCTTGCTCATCTAAGCCCAATGGGTCGTCTTTGGACTGCTGCA
JMFS073F09+           GAATAGCCAAGCCACCGTCTTGCTCATCTAAGCCCAATGGGTCGTCTTTGGACTGCTGCA
                      ____________________________________________________________
consensus             GAATAGCCAAGCCACCGTCTTGCTCATCTAAGCCCAATGGGTCGTCTTTGGACTGCTGCA
 
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JMFS143E02+           ACGTGGGGGGTTCTACACCACCGTTCATTGTTATGCTTCTCGAATTGGCGAAAGCATGGA
JMFS073F09+           ACGTGGGGGGTTCTACACCACCGTTCATTGTTATGCTTCTCGAATTGGCGAAAGCATGGA
                      ____________________________________________________________
consensus             ACGTGGGGGGTTCTACACCACCGTTCATTGTTATGCTTCTCGAATTGGCGAAAGCATGGA
 
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JMFS143E02+           ATCTTGCGGCTGCGCGTTCGTGCTTCTTTGGCCATCCATAACTGCTCGATGAGATCATTT
JMFS073F09+           ATCTTGCGGCTGCGCGTTCGTGCTTCTTTGGCCATCCATAACTGCTCGATGAGATCATTT
                      ____________________________________________________________
consensus             ATCTTGCGGCTGCGCGTTCGTGCTTCTTTGGCCATCCATAACTGCTCGATGAGATCATTT
 
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JMFS143E02+           GTGCGGGGACCGAGCAAATGCTGTCCCCTTGAGACACCTCGGTTGCAGTCTGGGAGGCTG
JMFS073F09+           GTGCGGGGACCGAGCAAATGCTGTCCCCTTGAGACACCTCGGTTGCAGTCTGGGAGGCTG
                      ____________________________________________________________
consensus             GTGCGGGGACCGAGCAAATGCTGTCCCCTTGAGACACCTCGGTTGCAGTCTGGGAGGCTG
 
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JMFS143E02+           CCTCCGACACGGTATCATAAGATGATTTCAGTGACATCCGTGCCACAGTGGCGCCTCTAG
JMFS073F09+           CCTCCGACACGGTATCATAAGATGATTTCAGTGACATCCGTGCCACAGTGGCGCCTCTAG
                      ____________________________________________________________
consensus             CCTCCGACACGGTATCATAAGATGATTTCAGTGACATCCGTGCCACAGTGGCGCCTCTAG
 
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JMFS143E02+           AACCGCTACCATTGCCTCTACGAGAGCCAAGCATGTTGGCCTCCACCTCCTCAGTGGGA 
JMFS073F09+           AACCGCTACCATTGCCTCTACGAGAGCCAAGCATGTTGGCCTCCACCTCCTCAGTGGGAG
                      ____________________________________________________________
consensus             AACCGCTACCATTGCCTCTACGAGAGCCAAGCATGTTGGCCTCCACCTCCTCAGTGGGAG
 
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JMFS073F09+           CCATTCCTTTTCGAAGTCTTCTCATATTTCTTGAAGATCCAGATCCCCTTACAGCGGAAC
                      ____________________________________________________________
consensus             CCATTCCTTTTCGAAGTCTTCTCATATTTCTTGAAGATCCAGATCCCCTTACAGCGGAAC
 
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JMFS073F09+           CAGCCTTCCTTCTCCTAGCTTCTTCGCGGAATTTTGCATCAATCTCTCTGTTTGGTGGGA
                      ____________________________________________________________
consensus             CAGCCTTCCTTCTCCTAGCTTCTTCGCGGAATTTTGCATCAATCTCTCTGTTTGGTGGGA
 
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JMFS073F09+           ATTTTGGCATGCTTGATGGATCACAAGCATAGGGCTTCGTATGGAAATACTCGGAATTAA
                      ____________________________________________________________
consensus             ATTTTGGCATGCTTGATGGATCACAAGCATAGGGCTTCGTATGGAAATACTCGGAATTAA
 
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JMFS073F09+           GAGAAGATGAAGCTGTTCCACCTTATAGAAACGCTTCTCTCGATAGAGCCTTATAAGCGT
                      ____________________________________________________________
consensus             GAGAAGATGAAGCTGTTCCACCTTATAGAAACGCTTCTCTCGATAGAGCCTTATAAGCGT