Contig 011793:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF044P03+                                       TTAAGCCACCATTACCATTAGGAATCCAATAA
                      ____________________________________________________________
consensus                                         TTAAGCCACCATTACCATTAGGAATCCAATAA
 
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JMFF044P03+           TTAGAATCTTATTGAAATAGAAATAGTTTCTTTCCTAATCACCCACCATAAACCTAACGA
JMFF027E04+                                                     CCACCATAAACCTAACGA
                      ____________________________________________________________
consensus             TTAGAATCTTATTGAAATAGAAATAGTTTCTTTCCTAATCACCCACCATAAACCTAACGA
 
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JMFF044P03+           ATTGCTTCCAATAGCAAAATAACTACAGTACTACACAAATNTTCTACAAAAACTACCTGG
JMFF027E04+           ATTGCTTCCAATAGCAAAATAACTACAGTACTACACAAATTTTCTACAAAAACTACCTGG
                      ____________________________________________________________
consensus             ATTGCTTCCAATAGCAAAATAACTACAGTACTACACAAATTTTCTACAAAAACTACCTGG
 
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JMFF044P03+           TATAAGTCTATGACAGGCTATTGTGTGTTTGTAGGAGGCAACTTGGTCTCGTGGAAGAGT
JMFF027E04+           TATAAGTCTATGACAGGCTATTGTGTGTTTGTAGGAGGCAACTTGGTCTCGTGGAAGAGT
                      ____________________________________________________________
consensus             TATAAGTCTATGACAGGCTATTGTGTGTTTGTAGGAGGCAACTTGGTCTCGTGGAAGAGT
 
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JMFF044P03+           AAGAAGCAGAATGTAGTGTCGCGCTCGAGTGCAGAGTCTGAATACAGGGCTATGGCTCAT
JMFF027E04+           AAGAAGCAGAATGTAGTGTCGCGCTCGAGTGCAGAGTCTGAATACAGGGCTATGGCTCAT
                      ____________________________________________________________
consensus             AAGAAGCAGAATGTAGTGTCGCGCTCGAGTGCAGAGTCTGAATACAGGGCTATGGCTCAT
 
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JMFF044P03+           ATGACTAGTGAAATAGTCTGGGTGCATAATGTTCTAAAAGAAGTGGGTGTTGAAGTGAAG
JMFF027E04+           ATGACTAGTGAAATAGTCTGGGTGCATAATGTTCTAAAAGAAGTGGGTGTTGAAGTGAAG
JMFS072D09-                    GAAATAGTCTGGGTGCGTAACATTCTAAAAGAAGTGGGTGTTGAAGTTAAG
                      ____________________________________________________________
consensus             ATGACTAGTGAAATAGTCTGGGTGCATAATGTTCTAAAAGAAGTGGGTGTTGAAGTGAAG
 
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JMFF044P03+           TTACCAATAGATTTGTGGTGAGATAATTGTGCTGCCATACACATCGCGAATAATCCGGTT
JMFF027E04+           TTACCAATAGATTTGTGGTGAGATAATTGTGCTGCCATACACATCGCGAATAATCCGGTT
JMFS072D09-           TTACCGGTAGATTTGTGGTGTGATAACTGTGCTGCCATACACATCGCAAATAATCCGGTC
                      ____________________________________________________________
consensus             TTACCAATAGATTTGTGGTGAGATAATTGTGCTGCCATACACATCGCGAATAATCCGGTT
 
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JMFF044P03+           TTTCACAAGCGGACAACGCATATTGAGGTTGACTGCCATTTTATACAGGAGAAAGAGGAA
JMFF027E04+           TTTCACAAGCGGACAACGCATATTGAGGTTGACTGCCATTTTATACAGGAGAAAGAGGAA
JMFS072D09-           TTTCACGAGCGGACGAAGCATATTGAAGTGGACTGCCATTTTATACGGGAAAAAGTGGAG
                      ____________________________________________________________
consensus             TTTCACAAGCGGACAACGCATATTGAGGTTGACTGCCATTTTATACAGGAGAAAGAGGAA
 
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JMFF044P03+           CAAGGACTGATATCTATTACACATGTCCGGAGCGGTGATCAACTGGCCGACATATTCACA
JMFF027E04+           CAAGGACTGATATCTATTACACATGTCCGGAGCGGTGATCAACTGGCCGACATATTCACA
JMFS072D09-           CAAGGACTAATATCACTTACACATGTTCGGAGCGGTGATCAACTGGCTGACATATTCACG
                      ____________________________________________________________
consensus             CAAGGACTGATATCTATTACACATGTCCGGAGCGGTGATCAACTGGCCGACATATTCACA
 
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JMFF044P03+           AAAGGGCTTAGTAAGAGTCAGGTTTTATATATATGTAACAAGTTGGGCATGTTTGATATC
JMFF027E04+           AAAGGGCTTAGTAAGAGTCAGGTTTTATATATATGTAACAAGTTGGGCATGTTTGATATC
JMFS072D09-           AAAGGGTTGTGTAAGAATCGGGTTTCATATATATGTAACAAGTTGGGCATGTTTGATATC
                      ____________________________________________________________
consensus             AAAGGGCTTAGTAAGAGTCAGGTTTTATATATATGTAACAAGTTGGGCATGTTTGATATC
 
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JMFF044P03+           TATGCTCCAACTTGAGGGGGAGTGTTA                                 
JMFF027E04+           TATGCTCCAACTTGAGGGGGAGTGTTA                                 
JMFS072D09-           TATGCTCCAACTTGAGGGGGAGTGTTAGTAGGTTGTTAGAGGGATCCTCCTAACTACCCA
                      ____________________________________________________________
consensus             TATGCTCCAACTTGAGGGGGAGTGTTAGTAGGTTGTTAGAGGGATCCTCCTAACTACCCA
 
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JMFS072D09-           TTTGAATTTCGAAATGAGTGGTTAGGAGTATCCATTGCCTTGTATATAAGCGGAGGCTTT
                      ____________________________________________________________
consensus             TTTGAATTTCGAAATGAGTGGTTAGGAGTATCCATTGCCTTGTATATAAGCGGAGGCTTT
 
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JMFS072D09-           CTTTGTTCTCGACACAGTGTTAATGTTTCACAGTGCAATATACACACTTCACTTTAGAGC
                      ____________________________________________________________
consensus             CTTTGTTCTCGACACAGTGTTAATGTTTCACAGTGCAATATACACACTTCACTTTAGAGC