Contig 011792:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS134G06+                                         CAGCTTGAGCCTGTCTTTCAAATAGAGATT
JMFS138C05+                                         CAGCTTGAGCCTGTCTTTCAAATAGAGATT
                      ____________________________________________________________
consensus                                           CAGCTTGAGCCTGTCTTTCAAATAGAGATT
 
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JMFS134G06+           CAAAAGCACGATTAGCGATTGAACTAACTCCCTGGATACAGTTAAATAAGTGAGATGTTC
JMFS138C05+           CAAAAGCACGATTAGCGATTGAACTAACTCCCTGGATACAGTTAAATAAGTGAGATGTTC
                      ____________________________________________________________
consensus             CAAAAGCACGATTAGCGATTGAACTAACTCCCTGGATACAGTTAAATAAGTGAGATGTTC
 
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JMFS134G06+           CAGACCCTTCAGGATCTTCCTCAATCCGCCTCAATTTTGATTCAATATCATCAATTGTAG
JMFS138C05+           CAGACCCTTCAGGATCTTCCTCAATCCGCCTCAATTTTGATTCAATATCATCAATTGTAG
                      ____________________________________________________________
consensus             CAGACCCTTCAGGATCTTCCTCAATCCGCCTCAATTTTGATTCAATATCATCAATTGTAG
 
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JMFS134G06+           TTTTGCAAGAAATAAAGCAATCAAAGTTTTCTTTGACCAATTGTTTTTTCTGTTGAGTAC
JMFS138C05+           TTTTGCAAGAAATAAAGCAATCAAAGTTTTCTTTGACCAATTGTTTTTTCTGTTGAGTAC
                      ____________________________________________________________
consensus             TTTTGCAAGAAATAAAGCAATCAAAGTTTTCTTTGACCAATTGTTTTTTCTGTTGAGTAC
 
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JMFS134G06+           GGCCTTTAAGGTCGGATTTCAAAGAAAGAGCACCAGATTCCAGGTCTGCTGCACTAGTAT
JMFS138C05+           GGCCTTTAAGGTCGGATTTCAAAGAAAGAGCACCAGATTCCAGGTCTGCTGCACTAGTAT
                      ____________________________________________________________
consensus             GGCCTTTAAGGTCGGATTTCAAAGAAAGAGCACCAGATTCCAGGTCTGCTGCACTAGTAT
 
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JMFS134G06+           TTTGGTGTATTCGGGATAAAAACAACTTCGAATCAAACGTCTCGGAGAAAAAATTCAACC
JMFS138C05+           TTTGGTGTATTCGGGATAAAAACAACTTCGAATCAAACGTCTCGGAGAAAAAATTCAACC
                      ____________________________________________________________
consensus             TTTGGTGTATTCGGGATAAAAACAACTTCGAATCAAACGTCTCGGAGAAAAAATTCAACC
 
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JMFS134G06+           GCTCGCGAAATTCAGGATTTAAATGCTCTCTATCAGCAGCAGTTGGAGAGCTTGATGAAC
JMFS138C05+           GCTCGCGAAATTCAGGATTTAAATGCTCTCTATCAGCAGCAGTTGGAGAGCTTGATGAAC
                      ____________________________________________________________
consensus             GCTCGCGAAATTCAGGATTTAAATGCTCTCTATCAGCAGCAGTTGGAGAGCTTGATGAAC
 
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JMFS134G06+           GCTCGGTGATCAACTTCAAAGTTTTGTTGTCAATTATCCCTAATCCAAGAGGATCTATAC
JMFS138C05+           GCTCGGTGATCAACTTCAAAGTTTTGTTGTCAATTATCCCTAATCCAAGAGGATCTATAC
JMFS154D08+                                TTTTGTTGTCAATTATCCCTAATCCAAGAGGATCTATAC
                      ____________________________________________________________
consensus             GCTCGGTGATCAACTTCAAAGTTTTGTTGTCAATTATCCCTAATCCAAGAGGATCTATAC
 
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JMFS134G06+           ATTCCATGCCACGGGGAAATGACTGTGTGGTATTAAGTCCCTTTTTTGTTGGATCATGCT
JMFS138C05+           ATTCCATGCCACGGGGAAATGACTGTGTGGTATTAAGTCCCTTTTTTGTTGGATCATGCT
JMFS154D08+           ATTCCATGCCACGGGGAAATGACTGTGTGGTATTAAGTCCCTTTTTTGTTGGATCATGCT
JMFS072C09+                                                      TTTTGTTGGATCATGCT
                      ____________________________________________________________
consensus             ATTCCATGCCACGGGGAAATGACTGTGTGGTATTAAGTCCCTTTTTTGTTGGATCATGCT
 
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JMFS134G06+           TAATAACCTTAGGTTGTGCAACGGGAACTGCTTTCGACTCCCTCATATCACGAACCCTAC
JMFS138C05+           TAATAACCTTAGGTTGTGCAACGGGAACTGCTTTCGACTCCCTCATATCACGAACCCTAC
JMFS154D08+           TAATAACCTTAGGTTGTGCAACGGGAACTGCTTTGGACTCCCTCATATCACGAACCGTAC
JMFS072C09+           TAATAACCTTAGGTTGTGCAACGGGAACTGCTTTCGACTCCCTCATATCACGAACCCTAC
                      ____________________________________________________________
consensus             TAATAACCTTAGGTTGTGCAACGGGAACTGCTTTCGACTCCCTCATATCACGAACCCTAC
 
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JMFS134G06+           GCCTTAGCTCTGTTTCGTCAACATGTTTCCAGCAGCCAGGCTCGCCACCATCCCA     
JMFS138C05+           GCCTTAGCTCTGTTTCGTCAACATGTTTCCAGCAGCCAGGCTCGCCACCATCCCA     
JMFS154D08+           GCCTTAGCTCTGTTTCGTCAACATGTTTCCAGCAGCCAGGCTCGCCACCATCCCACGCCT
JMFS072C09+           GCCTTAGCTCTGTTTCGTCAACATGTTTCCAGCAGCCAGGCTCGCCACCATCCCACGCCT
                      ____________________________________________________________
consensus             GCCTTAGCTCTGTTTCGTCAACATGTTTCCAGCAGCCAGGCTCGCCACCATCCCACGCCT
 
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JMFS154D08+           TCTCATCATTCTTCCCACCTCTCCCTCCGCTCGCGGCACGGTTCTTTTCCCCGCCGAAAC
JMFS072C09+           TCTCATCATTCTTCCCACCTCTCCCTCCGCTCGCGGCACGGTTCTTTTCCCCGCCGAAAC
                      ____________________________________________________________
consensus             TCTCATCATTCTTCCCACCTCTCCCTCCGCTCGCGGCACGGTTCTTTTCCCCGCCGAAAC
 
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JMFS154D08+           CGCGGTCCTTGGAGGAGTCCTCATCTCCGGAGGAAATGCTGAGCATCTCGACCTCCGAAT
JMFS072C09+           CGCGGTCCTTGGAGGAGTCCTCATCTCCGGAGGAAATGCTGAGCATCTCGACCTCCGAAT
                      ____________________________________________________________
consensus             CGCGGTCCTTGGAGGAGTCCTCATCTCCGGAGGAAATGCTGAGCATCTCGACCTCCGAAT
 
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JMFS154D08+           CATCGTCTTCCTCCACCTGCTTCCTCTGCTTGCGCTGCATCGTCGCGTTGGGAGCTCTTC
JMFS072C09+           CATCGTCTTCCTCCACCTGCTTCCTCTGCTTGCGCTGCATCGTCGCGTTGGGAGCTCTTC
                      ____________________________________________________________
consensus             CATCGTCTTCCTCCACCTGCTTCCTCTGCTTGCGCTGCATCGTCGCGTTGGGAGCTCTTC
 
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JMFS154D08+           CCCCCGCCGCCGCTCGCTGATTGGCCGCCGCTGCCGCTGCCGCCGCCGCCGAGCTGTGGA
JMFS072C09+           CCCCCGCCGCCGCTCGCTGATTGGCCGCCGCTGCCGCTGCCGCCGCCGCCG-GCTGTGGA
                      ____________________________________________________________
consensus             CCCCCGCCGCCGCTCGCTGATTGGCCGCCGCTGCCGCTGCCGCCGCCGCCGAGCTGTGGA
 
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JMFS154D08+           GGTGGCTGGACGTAGT                                            
JMFS072C09+           GGTGGCTGGACGTAGTTGCGGACCGGCTTAGACGGCTGCTTATCACCGGGCCTCCGGTAG
                      ____________________________________________________________
consensus             GGTGGCTGGACGTAGTTGCGGACCGGCTTAGACGGCTGCTTATCACCGGGCCTCCGGTAG
 
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JMFS072C09+           TTGAGATCGCGCTGGGCTTGCTCTCTCAATGCGATCTGCAAGAGCTCGTCCTCGTCTATA
                      ____________________________________________________________
consensus             TTGAGATCGCGCTGGGCTTGCTCTCTCAATGCGATCTGCAAGAGCTCGTCCTCGTCTATA
 
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JMFS072C09+           TCATTACTGTCGCTCGACATTTCTCTTTATATATAATTTTTATTTTTAATTATTCCGTGA
                      ____________________________________________________________
consensus             TCATTACTGTCGCTCGACATTTCTCTTTATATATAATTTTTATTTTTAATTATTCCGTGA
 
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JMFS072C09+           ATTTAGATACACAATATTGTACGTATAATTACCCAAATAAAATCAACAAAATTGAGAAAT
                      ____________________________________________________________
consensus             ATTTAGATACACAATATTGTACGTATAATTACCCAAATAAAATCAACAAAATTGAGAAAT