Contig 011785:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS064F08Sequence627011785 (2)gb|KHN28586.1|4e-20HMG-Y-related protein A [Glycine soja]
JMFS084D10Sequence603011785 (2)ref|XP_003634203.1|3e-31PREDICTED: histone H1 [Vitis vinifera] emb|CAN74749.1| hypothetical protein VITI

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS084D10+ AGATTCCGGCCCAATCCCGGCACTGTTCTG
JMFS064F08+ TTCCGGCCCAATCCCGGCACTGTTCTG
                      ____________________________________________________________
consensus AGATTCCGGCCCAATCCCGGCACTGTTCTG
 
. : . : . : . : . : . :
JMFS084D10+ GACCTCCGGAACAACAAAGGGCTGGAACTGAGGCATAGATGGTTGGTGGAAATGGAGCTG
JMFS064F08+ GACCTCCGGAACAACAAAGGGCTGGAACTGAGGCATAGATGGTTGGTGGAAATGGAGCTG
                      ____________________________________________________________
consensus GACCTCCGGAACAACAAAGGGCTGGAACTGAGGCATAGATGGTTGGTGGAAATGGAGCTG
 
. : . : . : . : . : . :
JMFS084D10+ AGGCGGGTGTTGAAGCTGGAACTGGCCCATAGAATCCTCCGGCTGAAACTGGAACTCCGG
JMFS064F08+ AGGCGGGTGTTGAAGCTGGAACTGGCCCATAGAATCCTCCGGCTGAAACTGGAACTCCGG
                      ____________________________________________________________
consensus AGGCGGGTGTTGAAGCTGGAACTGGCCCATAGAATCCTCCGGCTGAAACTGGAACTCCGG
 
. : . : . : . : . : . :
JMFS084D10+ CTGCTCAAGATTGGGCTTGGGAGGCCGACCGGGCCTCCTTTTCGGGCTGAGAGCATTTCC
JMFS064F08+ CTGCTCAAGATTGGGCTTGGGAGGCCGACCGGGCCTCCTTTTCGGGCTGAGAGCATTTCC
                      ____________________________________________________________
consensus CTGCTCAAGATTGGGCTTGGGAGGCCGACCGGGCCTCCTTTTCGGGCTGAGAGCATTTCC
 
. : . : . : . : . : . :
JMFS084D10+ AGCGGGGTCGGGCTGCGACTGAGTCAGAGATCTAGGGAGCGCATAAGAGTGCTTCACCAT
JMFS064F08+ AGCGGGGTCGGGCTGCGACTGAGTCAGAGATCTAGGGAGCGCATAAGAGTGCTTCACCAT
                      ____________________________________________________________
consensus AGCGGGGTCGGGCTGCGACTGAGTCAGAGATCTAGGGAGCGCATAAGAGTGCTTCACCAT
 
. : . : . : . : . : . :
JMFS084D10+ AACAAGCTCACCGGAGTTCTTCAACCGCTTAAGGTGCTGAGTCAACAAGGCCGAGTGATT
JMFS064F08+ AACAAGCTCACCGGAGTTCTTCAACCGCTTAAGGTGCTGAGTCAACAAGGCCGAGTGATT
                      ____________________________________________________________
consensus AACAAGCTCACCGGAGTTCTTCAACCGCTTAAGGTGCTGAGTCAACAAGGCCGAGTGATT
 
. : . : . : . : . : . :
JMFS084D10+ GGGCGGAAGGTCCGAGTAGACTCGCTCTATATACTTAGCTATAGCTTGTCTACTCGACCC
JMFS064F08+ GGGCGGAAGGTCCGAGTAGACTCGCTCTATATACTTAGCTATAGCTTGTCTACTCGACCC
                      ____________________________________________________________
consensus GGGCGGAAGGTCCGAGTAGACTCGCTCTATATACTTAGCTATAGCTTGTCTACTCGACCC
 
. : . : . : . : . : . :
JMFS084D10+ ATCCTTCTCCTTTAACGCCGTTATGGCCGCCGTTATCATCT
JMFS064F08+ ATCCTTCTCCTTTAACGCCGTTATGGCCGCCGTTATCATCTGAGCTATGCGAGCAGCGGC
                      ____________________________________________________________
consensus ATCCTTCTCCTTTAACGCCGTTATGGCCGCCGTTATCATCTGAGCTATGCGAGCAGCGGC
 
. : . : . : . : . : . :
JMFS064F08+ GAGAGACGGCGGTTCCACGGCTTCCATCGGCGGCGGGGGTGGTGGAAGTGGGTCCATCAC
                      ____________________________________________________________
consensus GAGAGACGGCGGTTCCACGGCTTCCATCGGCGGCGGGGGTGGTGGAAGTGGGTCCATCAC
 
. : . : . : . : . : . :
JMFS064F08+ TGTGCATATGTGGGTGGAATTAACGAGGGAAAGAAAGCAACAACAGTAGAAAGAAGAGGG
                      ____________________________________________________________
consensus TGTGCATATGTGGGTGGAATTAACGAGGGAAAGAAAGCAACAACAGTAGAAAGAAGAGGG
 
. : . : . : . : . : . :
JMFS064F08+ TTTTGGTGTGATGTTGAGGTGGAGTTGGGGGATTTAGGGATTGGGAAGAAGAGAGAGAAA
                      ____________________________________________________________
consensus TTTTGGTGTGATGTTGAGGTGGAGTTGGGGGATTTAGGGATTGGGAAGAAGAGAGAGAAA