Contig 011780:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF011B24+                    ATCCTCCCTTGAGCAGAAAGTAAAGGAGGCATCAACTGCTGAAGAAAGTT
                      ____________________________________________________________
consensus                       ATCCTCCCTTGAGCAGAAAGTAAAGGAGGCATCAACTGCTGAAGAAAGTT
 
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rJMSF011B24+          TGCTAGAAGAGAAAGTGACTTCTCTAAATGCTTTGGTGGAGAGGGCACATATTCCTGCAG
                      ____________________________________________________________
consensus             TGCTAGAAGAGAAAGTGACTTCTCTAAATGCTTTGGTGGAGAGGGCACATATTCCTGCAG
 
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rJMSF011B24+          TCAAGAAAGCTGATCTCAAGAAAGAACTCTCAAAGCTTCAGACTCAAGTGATACAAGCGA
                      ____________________________________________________________
consensus             TCAAGAAAGCTGATCTCAAGAAAGAACTCTCAAAGCTTCAGACTCAAGTGATACAAGCGA
 
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rJMSF011B24+          AAAAGAAGATTGCATTAGAGAACTCTCAAAAGGTTCTGAAAGCTGCTTCAGAAATGTCGG
                      ____________________________________________________________
consensus             AAAAGAAGATTGCATTAGAGAACTCTCAAAAGGTTCTGAAAGCTGCTTCAGAAATGTCGG
 
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rJMSF011B24+          AAGTTGCTACTTCTCATGGAAAGACTTACTGTGTCTTGCGTGTCAGTGTTGGTTTGGACA
                      ____________________________________________________________
consensus             AAGTTGCTACTTCTCATGGAAAGACTTACTGTGTCTTGCGTGTCAGTGTTGGTTTGGACA
 
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rJMSF011B24+          CATCTGCTGTTCGTGAAGCAGTTGTTAAAGTCATGGAACAGAAGGGGATGCCAGTTCTGA
                      ____________________________________________________________
consensus             CATCTGCTGTTCGTGAAGCAGTTGTTAAAGTCATGGAACAGAAGGGGATGCCAGTTCTGA
 
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rJMSF011B24+          TATTTAGCACAGACGAAGCAGCAAACAAGGTTTTAGTGTGTGCGGGCGTGCCTGAAAAAA
JMFS056C01-                                                             CCTGAAAAAA
                      ____________________________________________________________
consensus             TATTTAGCACAGACGAAGCAGCAAACAAGGTTTTAGTGTGTGCGGGCGTGCCTGAAAAAA
 
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rJMSF011B24+          GTGACAGTTGCCATCAATTGAATGTAAAAGATTGGCTGGATGCGGCTTTGAAGCCCTTAG
JMFS056C01-           GTGACAGTTGCCATCAATTGAATGTAAAAGATTGGCTGGATGCGGCTTTGAAGCCCTTAG
                      ____________________________________________________________
consensus             GTGACAGTTGCCATCAATTGAATGTAAAAGATTGGCTGGATGCGGCTTTGAAGCCCTTAG
 
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rJMSF011B24+          GAGGTAAGGGCGGAGGAGGAAAAAGTGGTCTTGCTCAAGGGCAGGCAACCGGTTTGTCAC
JMFS056C01-           GAGGTAAGGGCGGAGGAGGAAAAAGTGGTCTTGCTCAAGGGCAGGCAACCGGTTTGTCAC
                      ____________________________________________________________
consensus             GAGGTAAGGGCGGAGGAGGAAAAAGTGGTCTTGCTCAAGGGCAGGCAACCGGTTTGTCAC
 
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rJMSF011B24+          ATGTAGATGATGCAATGGACGTGGCTACATCATTTGCTGCCATGAAACTGAGTTAACCTC
JMFS056C01-           ATGTAGATGATGCAATGGACGTGGCTACATCATTTGCTGCCATGAAACTGAGTTAACCTC
                      ____________________________________________________________
consensus             ATGTAGATGATGCAATGGACGTGGCTACATCATTTGCTGCCATGAAACTGAGTTAACCTC
 
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rJMSF011B24+          ACAAGCTTGAAGACAATAATAATTGAAAAATATTGCCAGAGGCAGAGAAAGAGAAGTAGT
JMFS056C01-           ACAAGCTTGAAGACAATAATAATTGAAAAATATTGCCAGAGGCAGAGAAAGAGAAGTAGT
                      ____________________________________________________________
consensus             ACAAGCTTGAAGACAATAATAATTGAAAAATATTGCCAGAGGCAGAGAAAGAGAAGTAGT
 
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rJMSF011B24+          ATTAAAAGATTGATGTTTGTTACTGTAAAGAAGTTGAAAAAGAAATGTNTAATTGGGGGT
JMFS056C01-           ATTAAAAGATTGATGTTTGTTACTGTAAAGAAGTTGAAAAAGAAATGTATAATTGGGGGT
                      ____________________________________________________________
consensus             ATTAAAAGATTGATGTTTGTTACTGTAAAGAAGTTGAAAAAGAAATGTATAATTGGGGGT
 
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rJMSF011B24+          TTTTTAAAAAAAAATTTCTCCCGCTAAAATTCTGTTAC                      
JMFS056C01-           TTTTT-AAAAAAAATTTCTCCCGCTAAAATTCTGTTACATTGCTTGTATATATTCACTAG
                      ____________________________________________________________
consensus             TTTTTAAAAAAAAATTTCTCCCGCTAAAATTCTGTTACATTGCTTGTATATATTCACTAG
 
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JMFS056C01-           ACTAGAAATCGAAAAAAAGTTCTAATCACACATATCTTACTTGTGTAATAGTTTGATTAC
                      ____________________________________________________________
consensus             ACTAGAAATCGAAAAAAAGTTCTAATCACACATATCTTACTTGTGTAATAGTTTGATTAC