Contig 011779:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042C07-                                    TTGAACTTTTATCAGGATTTTGGTCATATTTTGA
                      ____________________________________________________________
consensus                                       TTGAACTTTTATCAGGATTTTGGTCATATTTTGA
 
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rJMSF042C07-          AGCAAATTCCTCGACCAAGGAACTTTTTTTGTTCTCCTTATTGAACCCTTCTGAATCCCC
                      ____________________________________________________________
consensus             AGCAAATTCCTCGACCAAGGAACTTTTTTTGTTCTCCTTATTGAACCCTTCTGAATCCCC
 
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rJMSF042C07-          CACATTGGACTGCCCTTCGGTCCGGATGTCATTTTGCTCAGCACAGGATTTAGGAGCATT
                      ____________________________________________________________
consensus             CACATTGGACTGCCCTTCGGTCCGGATGTCATTTTGCTCAGCACAGGATTTAGGAGCATT
 
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rJMSF042C07-          ATTGCTCTTAATCTTCTGAAAAACTTGCCCTCTTTGTCCAAAAGAACAAGAAGTATCAAA
                      ____________________________________________________________
consensus             ATTGCTCTTAATCTTCTGAAAAACTTGCCCTCTTTGTCCAAAAGAACAAGAAGTATCAAA
 
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rJMSF042C07-          CTCGTTGACTTCATCCATGCTTGCTCTTCTATCAGAGAGATTATCGGAGCGGTCAGGCTG
                      ____________________________________________________________
consensus             CTCGTTGACTTCATCCATGCTTGCTCTTCTATCAGAGAGATTATCGGAGCGGTCAGGCTG
 
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rJMSF042C07-          AGAAGAACTCTGCTGAAATGTTCCCATCGCTCTCTGAGTTACAGACAAATCATCATTACA
                      ____________________________________________________________
consensus             AGAAGAACTCTGCTGAAATGTTCCCATCGCTCTCTGAGTTACAGACAAATCATCATTACA
 
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rJMSF042C07-          AAATGTAGCCAACAATGTCTTTTTTAGGGCAGTATTTTGTACTACAGGTTCGCTCTGAGA
                      ____________________________________________________________
consensus             AAATGTAGCCAACAATGTCTTTTTTAGGGCAGTATTTTGTACTACAGGTTCGCTCTGAGA
 
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rJMSF042C07-          CTTTTCTATATAGGAAGTATAGGATGGAATTGACAATGATCCCTTAGATTCAGATTGTGC
JMSF042C07+              TTCTATATAGGAAGTATAGGATGGAATTGACAATGATCCCTTAGATTCAGATTGTGC
                      ____________________________________________________________
consensus             CTTTTCTATATAGGAAGTATAGGATGGAATTGACAATGATCCCTTAGATTCAGATTGTGC
 
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rJMSF042C07-          GCATATATTTCCCTTCTCAAGTATCCAACTTGGTAATTTAGGTGTCTCCCCAGTATGCAC
JMSF042C07+           GCATATATTTCCCTTCTCAAGTATCCAACTTGGTAATTTAGGTGTCTCCCCAGTATGCAC
                      ____________________________________________________________
consensus             GCATATATTTCCCTTCTCAAGTATCCAACTTGGTAATTTAGGTGTCTCCCCAGTATGCAC
 
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rJMSF042C07-          TTCCAACTTTTGGAACTGTTCTTCATGTTTTAAAAGCTGCAGCTCATTACTTAGAGGCAT
JMSF042C07+           TTCCAACTTTTGGAACTGTTCTTCATGTTTTAAAAGCTGCAGCTCATTACTTAGAGGCAT
JMFS055G07+                                           AAAGCTGCAGCTCATTACTTAGAGGCAT
                      ____________________________________________________________
consensus             TTCCAACTTTTGGAACTGTTCTTCATGTTTTAAAAGCTGCAGCTCATTACTTAGAGGCAT
 
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rJMSF042C07-          GTCCTTTGAATATTCAATTTCATATATTTGGGAATCAGAATTACCAGTCAATCCAGTTTC
JMSF042C07+           GTCCTTTGAATATTCAATTTCATATATTTGGGAATCAGAATTACCAGTCAATCCAGTTTC
JMFS055G07+           GTCCTTTGAATATTCAATTTCATATATTTGGGAATCAGAATTACCAGTCAATCCAGTTTC
                      ____________________________________________________________
consensus             GTCCTTTGAATATTCAATTTCATATATTTGGGAATCAGAATTACCAGTCAATCCAGTTTC
 
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rJMSF042C07-          TGTAGTATCATTATGATGAAACTTATCAGCTAGAAANTNGATGTCGCATAGCACATGCAT
JMSF042C07+           TGTAGTATCATTATGATGAAACTTATCAGCTAGAAA-TTGATGTCGCATAGCACATGCAT
JMFS055G07+           TGTAGTATCATTATGATGAAACTTATCAGCTAGAAA-TTGATGTCGCATAGCACATGCAT
                      ____________________________________________________________
consensus             TGTAGTATCATTATGATGAAACTTATCAGCTAGAAA-TTGATGTCGCATAGCACATGCAT
 
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rJMSF042C07-          CACGCT                                                      
JMSF042C07+           CACGCTTTCTTTGAATTGAAGTAAATTCACGAGTATTTCTTCTTATGTTTTTCAGGAGTG
JMFS055G07+           CACGCTTTCTTTGAATTGAAGTAAATTCACGAGTATTTCTTCTTATGTTTTTCAGGAGTG
                      ____________________________________________________________
consensus             CACGCTTTCTTTGAATTGAAGTAAATTCACGAGTATTTCTTCTTATGTTTTTCAGGAGTG
 
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JMSF042C07+           ACTCCTTAGGCCATGAATATTCTGGTAGATCAGTTGTTGTCAATTTCCTTTTACCCAATA
JMFS055G07+           ACTCCTTAGGCCATGAATATTCTGGTAGATCAGTTGTTGTCAATTTCCTTTTACCCAATA
                      ____________________________________________________________
consensus             ACTCCTTAGGCCATGAATATTCTGGTAGATCAGTTGTTGTCAATTTCCTTTTACCCAATA
 
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JMSF042C07+           TTGTTCCAGAAGCAACACTCGTATCACTTCCTGAAGGAGAGACTGTATTTTTTTCCATAT
JMFS055G07+           TTGTTCCAGAAGCAACACTCGTATCACTTCCTGAAGGAGAGACTGTATTTTTTTCCATAT
                      ____________________________________________________________
consensus             TTGTTCCAGAAGCAACACTCGTATCACTTCCTGAAGGAGAGACTGTATTTTTTTCCATAT
 
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JMSF042C07+           AAACTCCCTTACGTTATTCTGAGGCCCTTTTGAGTTTGGTAAGTTCACAAAAACTGTCTT
JMFS055G07+           AAACTCCCTTACGTTATTCTGAGGCCCTTTTGAGTTTGGTAAGTTCACAAAAACTGTCTT
                      ____________________________________________________________
consensus             AAACTCCCTTACGTTATTCTGAGGCCCTTTTGAGTTTGGTAAGTTCACAAAAACTGTCTT
 
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JMSF042C07+           TTACACAATTTCTTGAAAATGAAACCTCAGGCAGTGCTGGTCTTCATTACTAAGAGGCGC
JMFS055G07+           TTACACAATTTCTTGAAAATGAAACCTCAGGCAGTGCTGGTCTTCATTACTAAGAGGCGC
                      ____________________________________________________________
consensus             TTACACAATTTCTTGAAAATGAAACCTCAGGCAGTGCTGGTCTTCATTACTAAGAGGCGC
 
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JMSF042C07+           AACTCGCAAGATCTCATTGGGGAGATTTGGGAGTCTAGGGCTTGTGAAAAATTAGTTTCT
JMFS055G07+           AACTCGCAAGATCTCATTGGGGAGATTTGGGAGTCTAGGGCTTGTGAAAAATTAGTTTCT
                      ____________________________________________________________
consensus             AACTCGCAAGATCTCATTGGGGAGATTTGGGAGTCTAGGGCTTGTGAAAAATTAGTTTCT
 
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JMSF042C07+           TTTTCTTTTTATCCTTTAGAAAAGCTTCCGCCGTCTGATCGCTGCAGCCACCGGTGATTC
JMFS055G07+           TTTTCTTTTTATCCTTTAGAAAAGCTTCCGCCGTCTGATCGCTGCAGCCACCGGTGATTC
                      ____________________________________________________________
consensus             TTTTCTTTTTATCCTTTAGAAAAGCTTCCGCCGTCTGATCGCTGCAGCCACCGGTGATTC
 
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JMSF042C07+           GCTGAGTCGGGGGCGTC                                           
JMFS055G07+           GCTGAGTCGGGGGCGTCGGACTGGGAGTACCAAACCGGAATCGAACTTAAGAGTGTCTAG
                      ____________________________________________________________
consensus             GCTGAGTCGGGGGCGTCGGACTGGGAGTACCAAACCGGAATCGAACTTAAGAGTGTCTAG