Contig 011776:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006P05Sequence580011776 (5)ref|XP_009768347.1|2e-21PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana sylvestri800001140 (2)ref|XP_006360453.1|5e-80PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3 [Solanum tu
JMFF032E16Sequence580011776 (5)ref|XP_009768347.1|2e-21PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana sylvestri799001140 (2)ref|XP_006360453.1|4e-77PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3 [Solanum tu
JMFS011F09Sequence620011776 (5)ref|XP_009596897.1|6e-33PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana tomentosi
JMFS052E12Sequence613011776 (5)ref|XP_009768349.1|8e-22PREDICTED: uncharacterized protein DDB_G0274915 isoform X2 [Nicotiana sylvestri
JMFS164G11Sequence604011776 (5)ref|XP_009768349.1|1e-28PREDICTED: uncharacterized protein DDB_G0274915 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS011F09+ ACGAACCAAATGTAGGGGT
                      ____________________________________________________________
consensus ACGAACCAAATGTAGGGGT
 
. : . : . : . : . : . :
JMFS011F09+ GCTAGGAGTACCAAATGCAGGTTGACTTTGTGCTCCAAACGGTGTGGATGAACCAAATAC
JMFS164G11+ GAGTACCAAATGCAGGTTGACTNTGTGCTCCAAACGGTGTGGATGAACCAAATAC
JMFF032E16+ GAACCAAATAC
JMFF006P05+ GAACCAAATAC
JMFS052E12+ GAACCAAATAC
                      ____________________________________________________________
consensus GCTAGGAGTACCAAATGCAGGTTGACTTTGTGCTCCAAACGGTGTGGATGAACCAAATAC
 
. : . : . : . : . : . :
JMFS011F09+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFS164G11+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFF032E16+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFF006P05+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFS052E12+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
                      ____________________________________________________________
consensus ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
 
. : . : . : . : . : . :
JMFS011F09+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFS164G11+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFF032E16+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFF006P05+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFS052E12+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
                      ____________________________________________________________
consensus AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
 
. : . : . : . : . : . :
JMFS011F09+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFS164G11+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFF032E16+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFF006P05+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFS052E12+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
                      ____________________________________________________________
consensus TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
 
. : . : . : . : . : . :
JMFS011F09+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFS164G11+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFF032E16+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFF006P05+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFS052E12+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
                      ____________________________________________________________
consensus TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
 
. : . : . : . : . : . :
JMFS011F09+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
JMFS164G11+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
JMFF032E16+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAACATTAGTCCCGGTTTGAGATCC
JMFF006P05+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAACATTAGTCCCGGTTTGAGATCC
JMFS052E12+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
                      ____________________________________________________________
consensus GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
 
. : . : . : . : . : . :
JMFS011F09+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFS164G11+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFF032E16+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFF006P05+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFS052E12+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
                      ____________________________________________________________
consensus AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
 
. : . : . : . : . : . :
JMFS011F09+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFS164G11+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFF032E16+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFF006P05+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFS052E12+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
                      ____________________________________________________________
consensus AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
 
. : . : . : . : . : . :
JMFS011F09+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATG-----CCCTCTAATT
JMFS164G11+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFF032E16+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFF006P05+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFS052E12+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
                      ____________________________________________________________
consensus CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
 
. : . : . : . : . : . :
JMFS011F09+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFS164G11+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFF032E16+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFF006P05+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFS052E12+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
                      ____________________________________________________________
consensus CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
 
. : . : . : . : . : . :
JMFS011F09+ GCCGTC
JMFS164G11+ GCCGTCTTC
JMFF032E16+ GCCGTCTTCGCTTCAAAATTGCCGTTT
JMFF006P05+ GCCGTCTTCGCTTCAAAATTGCCGTTT
JMFS052E12+ GCCGTCTTCGCTTCAAAATTGCCGTTTATTTTCGCTGCTTCGCATCGTTCGCAGAGGAAA
                      ____________________________________________________________
consensus GCCGTCTTCGCTTCAAAATTGCCGTTTATTTTCGCTGCTTCGCATCGTTCGCAGAGGAAA