| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006P05 | Sequence | 580 | 011776 (5) | ref|XP_009768347.1| | 2e-21 | PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana sylvestri | 800 | 001140 (2) | ref|XP_006360453.1| | 5e-80 | PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3 [Solanum tu |
| JMFF032E16 | Sequence | 580 | 011776 (5) | ref|XP_009768347.1| | 2e-21 | PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana sylvestri | 799 | 001140 (2) | ref|XP_006360453.1| | 4e-77 | PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3 [Solanum tu |
| JMFS011F09 | Sequence | 620 | 011776 (5) | ref|XP_009596897.1| | 6e-33 | PREDICTED: uncharacterized protein DDB_G0274915 isoform X1 [Nicotiana tomentosi | |||||
| JMFS052E12 | Sequence | 613 | 011776 (5) | ref|XP_009768349.1| | 8e-22 | PREDICTED: uncharacterized protein DDB_G0274915 isoform X2 [Nicotiana sylvestri | |||||
| JMFS164G11 | Sequence | 604 | 011776 (5) | ref|XP_009768349.1| | 1e-28 | PREDICTED: uncharacterized protein DDB_G0274915 isoform X2 [Nicotiana sylvestri | |||||
This contig is upended
. : . : . : . : . : . :
JMFS011F09+ ACGAACCAAATGTAGGGGT
____________________________________________________________
consensus ACGAACCAAATGTAGGGGT
. : . : . : . : . : . :
JMFS011F09+ GCTAGGAGTACCAAATGCAGGTTGACTTTGTGCTCCAAACGGTGTGGATGAACCAAATAC
JMFS164G11+ GAGTACCAAATGCAGGTTGACTNTGTGCTCCAAACGGTGTGGATGAACCAAATAC
JMFF032E16+ GAACCAAATAC
JMFF006P05+ GAACCAAATAC
JMFS052E12+ GAACCAAATAC
____________________________________________________________
consensus GCTAGGAGTACCAAATGCAGGTTGACTTTGTGCTCCAAACGGTGTGGATGAACCAAATAC
. : . : . : . : . : . :
JMFS011F09+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFS164G11+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFF032E16+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFF006P05+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
JMFS052E12+ ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
____________________________________________________________
consensus ATTGCTCCCAAATGCAGGTTGAGATTGCTGAAAGGAGCCTCCAAAAGGACTTGATTGGGG
. : . : . : . : . : . :
JMFS011F09+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFS164G11+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFF032E16+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFF006P05+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
JMFS052E12+ AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
____________________________________________________________
consensus AGTGCTTGAACCAAATGCACCAAAAGCAGGTTTTTGCCCAAATATGGAAGTACTGCCAAA
. : . : . : . : . : . :
JMFS011F09+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFS164G11+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFF032E16+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFF006P05+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
JMFS052E12+ TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
____________________________________________________________
consensus TGATGAGGATGAACTGCCAAATGCAGGAGTTGATGAAGCTCCAAATGTAGGTGTCGTGCT
. : . : . : . : . : . :
JMFS011F09+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFS164G11+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFF032E16+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFF006P05+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
JMFS052E12+ TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
____________________________________________________________
consensus TCCAAAAGCAGGAGAAGATGCACCAAAAACTGGAGTGGAACCTAAAGGCGAAGAGGACTG
. : . : . : . : . : . :
JMFS011F09+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
JMFS164G11+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
JMFF032E16+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAACATTAGTCCCGGTTTGAGATCC
JMFF006P05+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAACATTAGTCCCGGTTTGAGATCC
JMFS052E12+ GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
____________________________________________________________
consensus GGTTGCTCCAAAAACACCAGTAGATGTGCCACCAAAAATATTAGTCCCGGTTTGAGATCC
. : . : . : . : . : . :
JMFS011F09+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFS164G11+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFF032E16+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFF006P05+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
JMFS052E12+ AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
____________________________________________________________
consensus AAAAGGGGTTGTACCACCAAAAGGCTTAGGTGCAAATGGATTGTTGTTTGTCTGCCCAAA
. : . : . : . : . : . :
JMFS011F09+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFS164G11+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFF032E16+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFF006P05+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
JMFS052E12+ AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
____________________________________________________________
consensus AACTGGTTGTGAGCCAAATGGGCTGCTGGATGACTGCCCAAAAGGGTTCGTTGATCCAAA
. : . : . : . : . : . :
JMFS011F09+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATG-----CCCTCTAATT
JMFS164G11+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFF032E16+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFF006P05+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
JMFS052E12+ CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
____________________________________________________________
consensus CATCGTTCCGCTTGAATCCTATCCAGCAGCAATTTGGATCCAATGCTAAACCCTCTAATT
. : . : . : . : . : . :
JMFS011F09+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFS164G11+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFF032E16+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFF006P05+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
JMFS052E12+ CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
____________________________________________________________
consensus CTTGCCTTCTGCCGTCTCCAATCACCAGATCTTCATCCTCTGCTTCTCGTCTTTTTCTTC
. : . : . : . : . : . :
JMFS011F09+ GCCGTC
JMFS164G11+ GCCGTCTTC
JMFF032E16+ GCCGTCTTCGCTTCAAAATTGCCGTTT
JMFF006P05+ GCCGTCTTCGCTTCAAAATTGCCGTTT
JMFS052E12+ GCCGTCTTCGCTTCAAAATTGCCGTTTATTTTCGCTGCTTCGCATCGTTCGCAGAGGAAA
____________________________________________________________
consensus GCCGTCTTCGCTTCAAAATTGCCGTTTATTTTCGCTGCTTCGCATCGTTCGCAGAGGAAA