| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS021B01 | Sequence | 627 | 011768 (4) | ref|XP_009607690.1| | 6e-06 | PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Nicotian | |||||
| JMFS042F05 | Sequence | 605 | 011768 (4) | ref|XP_010315815.1| | 2e-05 | PREDICTED: uncharacterized ATP-dependent helicase C17A2.12 isoform X1 [Solanum | |||||
| JMFS094G03 | Sequence | 620 | 011768 (4) | ref|XP_010315815.1| | 9e-05 | PREDICTED: uncharacterized ATP-dependent helicase C17A2.12 isoform X1 [Solanum | |||||
| JMSF033D06 | Sequence | 701 | 011768 (4) | ref|XP_009607690.1| | 1e-07 | PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Nicotian | 272 | 007157 (5) | gb|KDO46641.1| | 1e-32 | hypothetical protein CISIN_1g019043mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF033D06+ CATTACCAATG
____________________________________________________________
consensus CATTACCAATG
. : . : . : . : . : . :
JMSF033D06+ CCCCTGCTGGAATGGTCTTTCAAATGGATAGCAGCTGCATCTTTTGGAGTTGACCAAGCA
____________________________________________________________
consensus CCCCTGCTGGAATGGTCTTTCAAATGGATAGCAGCTGCATCTTTTGGAGTTGACCAAGCA
. : . : . : . : . : . :
JMSF033D06+ GATTGATAAGATTTTTCTTGGGTTTGACGAATCTGACTGCTGCCAACATTCTCTACTAAA
JMFS094G03+ TGACTGCTGCCAACATTCTCTACTAAA
____________________________________________________________
consensus GATTGATAAGATTTTTCTTGGGTTTGACGAATCTGACTGCTGCCAACATTCTCTACTAAA
. : . : . : . : . : . :
JMSF033D06+ CTGGATCTGGAAGAAGGACCAGAAGGATAAAAAGAAGCAGGAAGCGCCCTCTTCTTGACA
JMFS094G03+ CTGGATCTGGAAGAAGGACCAGAAGGATAAAAAGAAGCAGGAAGCGCCCTCTTCTTGACA
JMFS021B01+ CAGAAGGATAAAAAGAAGCAGGAAGCGCCCTCTTCTTGACA
JMFS042F05+ TTGACA
____________________________________________________________
consensus CTGGATCTGGAAGAAGGACCAGAAGGATAAAAAGAAGCAGGAAGCGCCCTCTTCTTGACA
. : . : . : . : . : . :
JMSF033D06+ TGATCATTTCTATCATCAGCAGAAGCCCTAGAACTTGAAGCTCCAAATCTATCACCATAA
JMFS094G03+ TGATCATTTCTATCATCAGCAGAAGCCCTAGAACTTGAAGCTCCAAATCTATCACCATAA
JMFS021B01+ TGATCATTTCTATCATCAGCAGAAGCCCTAGAACTTGAAGCTCCAAATCTATCACCATAA
JMFS042F05+ TGATCATTTCTATCATCAGCAGAAGCCCTAGAACTTGAAGCTCCAAATCTATCACCATAA
____________________________________________________________
consensus TGATCATTTCTATCATCAGCAGAAGCCCTAGAACTTGAAGCTCCAAATCTATCACCATAA
. : . : . : . : . : . :
JMSF033D06+ GATGGACGCACTGAAGAGCTTGCATTCACCCCATTAAAATTAAAAGAACTTCCATTTGCA
JMFS094G03+ GATGGACGCACTGAAGAGCTTGCATTCACCCCATTAAAATTAAAAGAACTTCCATTTGCA
JMFS021B01+ GATGGACGCACTGAAGAGCTTGCATTCACCCCATTAAAATTAAAAGAACTTCCATTTGCA
JMFS042F05+ GATGGACGCACTGAAGAGCTTGCATTCACCCCATTAAAATTAAAAGAACTTCCATTTGCA
____________________________________________________________
consensus GATGGACGCACTGAAGAGCTTGCATTCACCCCATTAAAATTAAAAGAACTTCCATTTGCA
. : . : . : . : . : . :
JMSF033D06+ GAGGCTGTTCTTTTGGGAGAAGGACCCCTTGCAGAGGGACGACTGTGATCTGATGCCCAT
JMFS094G03+ GAGGCTGTTCTTTTGGGAGAAGGACCCCTTGCAGAGGGACGACTGTGATCTGATGCCCAT
JMFS021B01+ GAGGCTGTTCTTTTGGGAGAAGGACCCCTTGCAGAGGGACGACTGTGATCTGATGCCCAT
JMFS042F05+ GAGGCTGTTCTTTTGGGAGAAGGACCCCTTGCAGAGGGACGACTGTGATCTGATGCCCAT
____________________________________________________________
consensus GAGGCTGTTCTTTTGGGAGAAGGACCCCTTGCAGAGGGACGACTGTGATCTGATGCCCAT
. : . : . : . : . : . :
JMSF033D06+ GTTGGAAGAACCCTAAAATCAGAAGAGGCAGAGTCCACTGTAGGTGACTCATCTTTGTAT
JMFS094G03+ GTTGGAAGAACCCTAAAATCAGAAGAGGCAGAGTCCACTGTAGGTGACTCATCTTTGTAT
JMFS021B01+ GTTGGAAGAACCCTAAAATCAGAAGAGGCAGAGTCCACTGTAGGTGACTCATCTTTGTAT
JMFS042F05+ GTTGGAAGAACCCTAAAATCAGAAGAGGCAGAGTCCACTGTAGGTGACTCATCTTTGTAT
____________________________________________________________
consensus GTTGGAAGAACCCTAAAATCAGAAGAGGCAGAGTCCACTGTAGGTGACTCATCTTTGTAT
. : . : . : . : . : . :
JMSF033D06+ TCATCTATTGCTCGCAACTCTGAATCTTCACTAGAATCGTCAGAACTGATAACAACATCT
JMFS094G03+ TCATCTATTGCTCGCAACTCTGAATCTTCACTAGAATCGTCAGAACTGATAACAACATCT
JMFS021B01+ TCATCTATTGCTCGCAACTCTGAATCTTCACTAGAATCGTCAGAACTGATAACAACATCT
JMFS042F05+ TCATCTATTGCTCGCAACTCTGAATCTTCACTAGAATCGTCAGAACTGATAACAACATCT
____________________________________________________________
consensus TCATCTATTGCTCGCAACTCTGAATCTTCACTAGAATCGTCAGAACTGATAACAACATCT
. : . : . : . : . : . :
JMSF033D06+ ATAGGAGCCATTCAAGAAACTTAAGAGACAACCAGAAGTGGTATTTGTAATTTGTAAAAT
JMFS094G03+ ATAGGAGCCATTCAAGAAACTTAAGAGACAACCAGAAGTGGTATTTGTAATTTGTAAAAT
JMFS021B01+ ATAGGAGCCATTCAAGAAACTTAAGAGACAACCAGAAGTGGTATTTGTAATTTGTAAAAT
JMFS042F05+ ATAGGAGCCATTCAAGAAACTTAAGAGACAACCAGAAGTGGTATTTGTAATTTGTAAAAT
____________________________________________________________
consensus ATAGGAGCCATTCAAGAAACTTAAGAGACAACCAGAAGTGGTATTTGTAATTTGTAAAAT
. : . : . : . : . : . :
JMSF033D06+ CCAATCT
JMFS094G03+ CCAATCT
JMFS021B01+ CCAATCTGTAAAAAGGTACACCTACACTCTTAAGATATGCAGCAGCTGTTCAACGTAACC
JMFS042F05+ CCAATCTGTAAAAAGGTACACCTACACTCTTAAGATATGCAGCAGCTGTTCAACGTAACC
____________________________________________________________
consensus CCAATCTGTAAAAAGGTACACCTACACTCTTAAGATATGCAGCAGCTGTTCAACGTAACC
. : . : . : . : . : . :
JMFS021B01+ ACGCATCTAAAATAAATACATACAGCCCATTTGCCTAATATCAGACTCTGGCATTACTTC
JMFS042F05+ ACGCATCTAAAATAAATACATACAGCCCATTTGCCTAATATCAGACTCTGGCATTACTTC
____________________________________________________________
consensus ACGCATCTAAAATAAATACATACAGCCCATTTGCCTAATATCAGACTCTGGCATTACTTC
. : . : . : . : . : . :
JMFS021B01+ TTCCTTGCTTAGCTGAAAGTTGGGAAATCGGGCTTCTTCTTCTTTTGTACGATGAATATT
JMFS042F05+ TTCCTTGCTTAGCTGAAAGTTGGGAAATCGGGCTTCTTCTTCTTTTGTACGATGAATATT
____________________________________________________________
consensus TTCCTTGCTTAGCTGAAAGTTGGGAAATCGGGCTTCTTCTTCTTTTGTACGATGAATATT
. : . : . : . : . : . :
JMFS021B01+ TGAAAAGNCCCTAATTCGTGAAGCGAAACTGCCGCAATTGAAGTAC
JMFS042F05+ TGAAAAG-CCCTAATTCGTGAAGCGAAACTGCCGCAATTGAAGTACGACAGCAATTCACT
____________________________________________________________
consensus TGAAAAGNCCCTAATTCGTGAAGCGAAACTGCCGCAATTGAAGTACGACAGCAATTCACT