Contig 011761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS034D09Sequence546011761 (2)ref|XP_006447935.1|3e-05hypothetical protein CICLE_v10014710mg [Citrus clementina] ref|XP_006447938.1| h
JMFS034D10Sequence615011761 (2)ref|XP_006447935.1|2e-07hypothetical protein CICLE_v10014710mg [Citrus clementina] ref|XP_006447938.1| h

Alignment

This contig is upended


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JMFS034D09+                             TTCAAGCTCAGCAAGTGCTTTCTGCAGTTGCTGGATCTTTGA
JMFS034D10+                              TCAAGCTCAGCAAATGCTTTCTGCAGTTGCTGGATCTTTGA
                      ____________________________________________________________
consensus                               TTCAAGCTCAGCAAGTGCTTTCTGCAGTTGCTGGATCTTTGA
 
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JMFS034D09+           GGTAGTCGAATGCATGAGTATCTCAACTGACTGAGAATCTTCCATGGCAGATTAGCCCGA
JMFS034D10+           GGTAGTCGAATGCATGAGTATCTCAACTGACTGAGAATCTTCCATGGCAGATTAGCCCGA
                      ____________________________________________________________
consensus             GGTAGTCGAATGCATGAGTATCTCAACTGACTGAGAATCTTCCATGGCAGATTAGCCCGA
 
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JMFS034D09+           AGCGATAACGAGCTAAAATTTCAGCGATAAGTGAGAACACAGCAGAAATTGACACTCGGA
JMFS034D10+           AGCGATAACGAGCTAAAATTTCAGCGATAAGTGAGAACACAGCAGAAATTGACACTCGGA
                      ____________________________________________________________
consensus             AGCGATAACGAGCTAAAATTTCAGCGATAAGTGAGAACACAGCAGAAATTGACACTCGGA
 
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JMFS034D09+           TCGGAAACGCGACTGAAAAATAAGCATAATTAGTAAAAGCGAAAAGTCTAATTATAATAC
JMFS034D10+           TCGGAAACGCGACTGAAAAATAAGCATAATTAGTAAAAGCGAAAAGTCTAATTATAATAC
                      ____________________________________________________________
consensus             TCGGAAACGCGACTGAAAAATAAGCATAATTAGTAAAAGCGAAAAGTCTAATTATAATAC
 
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JMFS034D09+           ACCGCACAAACCAAAATCAAAAAATTTTAAAAGTTGAGGTTTTGAAAAACAATACCTGAT
JMFS034D10+           ACCGCACAAACCAAAATCAAAAAATTTTAAAAGTTGAGGTTTTGAAAAACAATACCTGAT
                      ____________________________________________________________
consensus             ACCGCACAAACCAAAATCAAAAAATTTTAAAAGTTGAGGTTTTGAAAAACAATACCTGAT
 
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JMFS034D09+           CTAAAAACAGAGAGGGAAATAAAGCGAGGGAATGAGCAGATGAGAGAGCAACGCGGTGAA
JMFS034D10+           CTAAAAACAGAGAGGGAAATAAAGCGAGGGAATGAGCAGATGAGAGAGCAACGCGGTGAA
                      ____________________________________________________________
consensus             CTAAAAACAGAGAGGGAAATAAAGCGAGGGAATGAGCAGATGAGAGAGCAACGCGGTGAA
 
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JMFS034D09+           CTTACCGGATCGGAGGTGAGAGGCGGAGGCTGAGGGCGGCGGGAAGTCGCCGGAGAATCA
JMFS034D10+           CTTACCGGATCGGAGGTGAGAGGCGGAGGCTGAGGGCGGCGGGAAGTCGCCGGAGAATCA
                      ____________________________________________________________
consensus             CTTACCGGATCGGAGGTGAGAGGCGGAGGCTGAGGGCGGCGGGAAGTCGCCGGAGAATCA
 
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JMFS034D09+           GACCATTTTGGTGGCGAGGGAGGGTTTGGGATACAGTGAGCGAATCCCTAAAGAGAGGAA
JMFS034D10+           GACCATTTTGGTGGCGAGGGAGGGTTTGGGATACAGTGAGCGAATCCCTAAAGAGAGGAA
                      ____________________________________________________________
consensus             GACCATTTTGGTGGCGAGGGAGGGTTTGGGATACAGTGAGCGAATCCCTAAAGAGAGGAA
 
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JMFS034D09+           AGAGGAAAGTATCAGCGAGAATGTTGAGTGGTATTTATGACAAGTCTCCGACACACACGC
JMFS034D10+           AGAGGAAAGTATCAGCGAGAATGTTGAGTGGTATTTATGACAAGTCTCCGACACACACGC
                      ____________________________________________________________
consensus             AGAGGAAAGTATCAGCGAGAATGTTGAGTGGTATTTATGACAAGTCTCCGACACACACGC
 
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JMFS034D09+           ACACGCAGACAGACACACCTCTCT                                    
JMFS034D10+           ACACGCAGACAGACACACCTCTCTCTCTCTCTCTCTCTATCTATCTGTGTCAGAAGATGA
                      ____________________________________________________________
consensus             ACACGCAGACAGACACACCTCTCTCTCTCTCTCTCTCTATCTATCTGTGTCAGAAGATGA