Contig 011757:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS058D11+                                              AAGCTAGGACCCAGCATGTCCATAA
                      ____________________________________________________________
consensus                                                AAGCTAGGACCCAGCATGTCCATAA
 
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JMFS058D11+           CCATTATGTAGTAGTCACCCTGTTTGCCTTTATAATGTACTCTCGGCACACCATGACTGC
                      ____________________________________________________________
consensus             CCATTATGTAGTAGTCACCCTGTTTGCCTTTATAATGTACTCTCGGCACACCATGACTGC
 
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JMFS058D11+           CACCAAGCGTGTTGTAAACTTGCCACTCATATGGAGGCCCATAGCTACATCCTTTGCTAT
                      ____________________________________________________________
consensus             CACCAAGCGTGTTGTAAACTTGCCACTCATATGGAGGCCCATAGCTACATCCTTTGCTAT
 
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JMFS058D11+           TTCGGTGCTCAAACTTCAGGGCAACCTCCGCAGCCCCCGCACCACTACGTTCATTACCAC
                      ____________________________________________________________
consensus             TTCGGTGCTCAAACTTCAGGGCAACCTCCGCAGCCCCCGCACCACTACGTTCATTACCAC
 
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JMFS058D11+           CAGAAACACGGCGGCCCAAAAAGACTTGACCAAAACCACCTTTGCCCAGCTTCTTTTCAA
                      ____________________________________________________________
consensus             CAGAAACACGGCGGCCCAAAAAGACTTGACCAAAACCACCTTTGCCCAGCTTCTTTTCAA
 
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JMFS058D11+           CTTTATAGACCGGTGACTGTCCTATTTGCACCTCATCAGGGAAGGGAGGAGTGTTTCCCT
                      ____________________________________________________________
consensus             CTTTATAGACCGGTGACTGTCCTATTTGCACCTCATCAGGGAAGGGAGGAGTGTTTCCCT
 
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JMFS058D11+           CGTCCTCGCCAGTCCCTTTGTTATTGGCACTCAATCCACCGCTCTCATCCCCCATCTCTT
JMSF051J07+                TCGCCAGTCCCTTTGTTATTGGCACTCAATCCACCGCTCTCATCCCCCATCTCTT
                      ____________________________________________________________
consensus             CGTCCTCGCCAGTCCCTTTGTTATTGGCACTCAATCCACCGCTCTCATCCCCCATCTCTT
 
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JMFS058D11+           CCTCTGCCCCTTCTTCTTCCCTCTCTTTAGCCTTTATCTCCTCTTCTTCCCTCTTTGCCT
JMSF051J07+           CCTCTGCCCCTTCTTCTTCCCTCTCTTTAGCCTTTATCTCCTCTTCTTCCCTCTTTGCCT
                      ____________________________________________________________
consensus             CCTCTGCCCCTTCTTCTTCCCTCTCTTTAGCCTTTATCTCCTCTTCTTCCCTCTTTGCCT
 
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JMFS058D11+           TCTCGGCCTCAACCTTTGCTTTAGCGGCCTCTTCCTCCTCGACTTTGGCTTTGGCTTTAG
JMSF051J07+           TCTCGGCCTCAACCTTTGCTTTAGCGGCCTCTTCCTCCTCGACTTTGGCTTTGGCTTTAG
JMFF050G06+                          TTGCTTTAGCGGCCTCTTCCTCCTCGACTTTGGCTTTGGCTTTAG
                      ____________________________________________________________
consensus             TCTCGGCCTCAACCTTTGCTTTAGCGGCCTCTTCCTCCTCGACTTTGGCTTTGGCTTTAG
 
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JMFS058D11+           CCTTGGCTGCTCGCGTCTTAATATAAGTACTCCTAACAACTAAATCTTCTTCTTTCCCTT
JMSF051J07+           CCTTGGCTGCTCGCGTCTTAATATAAGTACTCCTAACAACTAAATCTTCTTCTTTCCCTT
JMFF050G06+           CCTTGGCTGCTCGCGTCTTAATATAAGTACTCCTAACAACTAAATCTTCTTCTTTCCCTT
JMFS031F12+                              AATATAAGTACTCCTAACAACTAAATCTTGTTCTTTCCCTT
                      ____________________________________________________________
consensus             CCTTGGCTGCTCGCGTCTTAATATAAGTACTCCTAACAACTAAATCTTCTTCTTTCCCTT
 
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JMFS058D11+           GACTCTTCGGTGTCTGTGGATTCTGCAACTGTTTTCGTCCTGGATCCGGCTTCGGTCCTT
JMSF051J07+           GACTCTTCGGTGTCTGTGGATTCTGCAACTGTTTTCGTCCTGGATCCGGCTTCGGTCCTT
JMFF050G06+           GACTCTTCGGTGTCTGTGGATTCTGCAACTGTTTTCGTCCTGGATCCGGCTTCGGTCCTT
JMFS031F12+           GAGTGTTCGGTGTCTGTGGATTCTGCAACTGTTTTGGTCCTGGATCGGGCTTCGGTCCTT
                      ____________________________________________________________
consensus             GACTCTTCGGTGTCTGTGGATTCTGCAACTGTTTTCGTCCTGGATCCGGCTTCGGTCCTT
 
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JMFS058D11+           TAGCCCTTACCAGAGAA                                           
JMSF051J07+           TAGCCCTTACCAGAGAAGCGCGGCGGCGGCCTCCACTCTGCAACTCCGGCATCCTCCTCT
JMFF050G06+           TAGCCCTTACCAGAGAAGCGCGGCGGCGGCCTCCACTCTGCAACTCCGGCATCCTCCTCT
JMFS031F12+           TAGCCCTTACCAGAGAAGCGCGGCGGCGGCCTCCACTGTGCAACTCGGGCATCCTCCTCT
                      ____________________________________________________________
consensus             TAGCCCTTACCAGAGAAGCGCGGCGGCGGCCTCCACTCTGCAACTCCGGCATCCTCCTCT
 
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JMSF051J07+           GCCCATGCAAATCGAACAGCAACCCAGAGAACTCGAGATTAACATCACTGCTACTGAGAT
JMFF050G06+           GCCCATGCAAATCGAACAGCAACCCAGAGAACTCGAGATTAACATCACTGCTACTGAGAT
JMFS031F12+           GCCCATGCAAGTCGAGCAGCAACCCAGAGAACTGGAGGTTAACATCACTGCTACTGAGAT
                      ____________________________________________________________
consensus             GCCCATGCAAATCGAACAGCAACCCAGAGAACTCGAGATTAACATCACTGCTACTGAGAT
 
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JMSF051J07+           ATCAACACCATAGACATCTGGAAAACCCTACCCGAAATCCTAAACCTTGAAAGAACTTGT
JMFF050G06+           ATCAACACCATAGACATCTGGAAAACCCTACCCGAAATCCTAAACCTTGAAAGAACTTGT
JMFS031F12+           ATCAACACCATAGACATCTGGAAAACCCTACCCGAAATCCTAAACCTTGAAAGAACTTGT
                      ____________________________________________________________
consensus             ATCAACACCATAGACATCTGGAAAACCCTACCCGAAATCCTAAACCTTGAAAGAACTTGT
 
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JMSF051J07+           TAAAGGATATAAAATCAAGGATTCAACCCGAGAGCATAAGGAAATTGTTGAATTTAACCC
JMFF050G06+           TAAAGGATATAAAATCAAGGATTCAACCCGAGAGCATAAGGAAATTGTTGAATTTAACCC
JMFS031F12+           TAAAGGATATAAAATCAAGGATTCAACCCGAGAGCATAAGGAAATTGTTGAATTTAACGC
                      ____________________________________________________________
consensus             TAAAGGATATAAAATCAAGGATTCAACCCGAGAGCATAAGGAAATTGTTGAATTTAACCC
 
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JMSF051J07+           AAATAGAGATGAATATTTGTGAGTCCAAGAAGAGTAGTATATACTAGTGAAATTTTGATG
JMFF050G06+           AAATAGAGATGAATATTTGTGAGTCCAAGAAGAGTAGTATATACTAGTGAAATTTTGATG
JMFS031F12+           AAATAGAGATGAATATTTGTGAGTCCAAGAAGAGTAGTATATACTAGTGAAATTTTGATG
                      ____________________________________________________________
consensus             AAATAGAGATGAATATTTGTGAGTCCAAGAAGAGTAGTATATACTAGTGAAATTTTGATG
 
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JMSF051J07+           CTAGGGTTTGTTTGAGAGACA                                       
JMFF050G06+           CTAGGGTTTGTTTGAGAGACA                                       
JMFS031F12+           CTAGGGTTTGTTTGAGAGACAGTGAAGAATGGAAAAGCTGTTGAAGGAGAACGGTAGTCG
                      ____________________________________________________________
consensus             CTAGGGTTTGTTTGAGAGACAGTGAAGAATGGAAAAGCTGTTGAAGGAGAACGGTAGTCG
 
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JMFS031F12+           CCTCCGTGGGCGTTTGTGTAGCTTAGTAGGGAGAACGGGGTTATGCGGGCAATTGGGCCC
                      ____________________________________________________________
consensus             CCTCCGTGGGCGTTTGTGTAGCTTAGTAGGGAGAACGGGGTTATGCGGGCAATTGGGCCC