Contig 011753:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027G08Sequence604011753 (2)ref|XP_009617294.1|4e-09PREDICTED: flowering time control protein FY isoform X1 [Nicotiana tomentosifor
JMSF010E19Sequence385011753 (2)738024485ref|XP_006364276.1|1e-10PREDICTED: flowering time control protein FY-like isoform X1 [Solanum tuberosum

Alignment

This contig is upended


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JMFS027G08+                                                                   GTCC
                      ____________________________________________________________
consensus                                                                     GTCC
 
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JMFS027G08+           CTTGAATCCCGTGNCCACATGCGAATCTGCATATATCGTACAACTGTACTAGTATAGTCA
                      ____________________________________________________________
consensus             CTTGAATCCCGTGNCCACATGCGAATCTGCATATATCGTACAACTGTACTAGTATAGTCA
 
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JMFS027G08+           ACAGCTCTTCTTTGTCCCATTTTCCTTATTCTCTNTGCGGCATAACTGTCAGCATGAGCT
                      ____________________________________________________________
consensus             ACAGCTCTTCTTTGTCCCATTTTCCTTATTCTCTNTGCGGCATAACTGTCAGCATGAGCT
 
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JMSF010E19+                                                   GCATGGAGGGGTGGTGATAT
JMFS027G08+           GCACCATCGTAAGCGTGATGAGGAGGAGGAGGTCCAGGGGGCATGGAGGGGTGGTGATAT
                      ____________________________________________________________
consensus             GCACCATCGTAAGCGTGATGAGGAGGAGGAGGTCCAGGGGGCATGGAGGGGTGGTGATAT
 
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JMSF010E19+           TCGGGAGGGGGAGGNCCATTTGCGTTGAGAGTAGTGGAGGAAGCCGAGGGCTGACGCATC
JMFS027G08+           TCGGGAGGGGGAGGGCCATTTGCGTTGAGAGTAGTGGAGGAAGCCGAGGGCTGACGCATC
                      ____________________________________________________________
consensus             TCGGGAGGGGGAGGGCCATTTGCGTTGAGAGTAGTGGAGGAAGCCGAGGGCTGACGCATC
 
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JMSF010E19+           ATTTGAGGCGGACCGGGCGGAGGTTGTGGACCCCTTGGGAAGTCTCCGAACGGATATGGC
JMFS027G08+           ATTTGAGGCGGACCGGGCGGAGGTTGTGGACCCCTTGGGAAGTCTCCGAACGGATATGGC
                      ____________________________________________________________
consensus             ATTTGAGGCGGACCGGGCGGAGGTTGTGGACCCCTTGGGAAGTCTCCGAACGGATATGGC
 
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JMSF010E19+           TGCTGGTGCTGGTGTTGGTGTTGGTGATTAGGCGGCGGCGGCTGCGGGTGGTGCTGCTGT
JMFS027G08+           TGCTGGTGCTGGTGTTGGTGTTGGTGATTAGGCGGCGGCGGCTGCGGGTGGTGCTGCTGT
                      ____________________________________________________________
consensus             TGCTGGTGCTGGTGTTGGTGTTGGTGATTAGGCGGCGGCGGCTGCGGGTGGTGCTGCTGT
 
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JMSF010E19+           TGTTGGTGGTAGTGGTGTTGCTGTTGCTGCTGCTGTTGTTGTTGTTGCTGTTGGTGATGG
JMFS027G08+           TGTTGGTGGTAGTGGTGTTGCTGTTGCTGCTGCTGTTGTTGTTGTTGCTGTTGGTGATGG
                      ____________________________________________________________
consensus             TGTTGGTGGTAGTGGTGTTGCTGTTGCTGCTGCTGTTGTTGTTGTTGCTGTTGGTGATGG
 
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JMSF010E19+           TGGTGGTGCTGCGATGGATCGCCGGCGGGCATCATCTTTGTCGACGACGAGAATAACCCA
JMFS027G08+           TGGTGGTGCTGCGATGGATCGCCGGCGGGCATCATCTTTGTCGACGACGAGAATAACCCA
                      ____________________________________________________________
consensus             TGGTGGTGCTGCGATGGATCGCCGGCGGGCATCATCTTTGTCGACGACGAGAATAACCCA
 
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JMSF010E19+           CTGCCCTAGCCCT                                               
JMFS027G08+           CTGCCCTAGCCCTAAGACTCAGATAAATTAAAAATCCGGAAACGAAAATGAGTGACAGAA
                      ____________________________________________________________
consensus             CTGCCCTAGCCCTAAGACTCAGATAAATTAAAAATCCGGAAACGAAAATGAGTGACAGAA
 
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JMFS027G08+           TTAGGTGGAAATTAGCGGGAAACTTTTTAATTTGGGGATTTTGGGGTTAGGGTTTAAGAA
                      ____________________________________________________________
consensus             TTAGGTGGAAATTAGCGGGAAACTTTTTAATTTGGGGATTTTGGGGTTAGGGTTTAAGAA