Contig 011752:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H15Sequence539011752 (6)ref|NP_001275331.1|5e-75uncharacterized protein LOC102585287 [Solanum tuberosum] dbj|BAE46414.1| hypothe664009636 (6)ref|XP_003548955.1|8e-13PREDICTED: vacuolar protein sorting-associated protein IST1-like isoform X1 [Gl
JMFF011C04Sequence568011752 (6)ref|XP_006354036.1|169PREDICTED: uncharacterized protein LOC102585287 [Solanum tuberosum]763009636 (6)ref|XP_011083402.1|77.8PREDICTED: uncharacterized protein LOC105165944 [Sesamum indicum]
JMFF020F07Sequence496011752 (6)ref|XP_006354036.1|203PREDICTED: uncharacterized protein LOC102585287 [Solanum tuberosum]689009636 (6)emb|CAN60958.1|2e-12hypothetical protein VITISV_034688 [Vitis vinifera]
JMFF022J11Sequence533011752 (6)ref|NP_001275331.1|3e-92uncharacterized protein LOC102585287 [Solanum tuberosum] dbj|BAE46414.1| hypothe759009636 (6)emb|CAN60958.1|4e-13hypothetical protein VITISV_034688 [Vitis vinifera]
JMFF024M07Sequence448011752 (6)ref|XP_006354036.1|169PREDICTED: uncharacterized protein LOC102585287 [Solanum tuberosum]695009636 (6)ref|XP_011083402.1|78.2PREDICTED: uncharacterized protein LOC105165944 [Sesamum indicum]
JMFS026H08Sequence616011752 (6)ref|XP_006354036.1|234PREDICTED: uncharacterized protein LOC102585287 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF011C04+                                                TCTAGCTCATGCTCCTCAGCAAT
                      ____________________________________________________________
consensus                                                  TCTAGCTCATGCTCCTCAGCAAT
 
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JMFF011C04+           TTCCTTCAGGACCTTCAGTTTCACATCAGGAGCAGGAGCACGAATAGAAAGCAGCTCTAT
JMFF022J11+                              TTCACATCAGGAGCAGGAGCACGAATAGAAAGCAGCTCTAT
                      ____________________________________________________________
consensus             TTCCTTCAGGACCTTCAGTTTCACATCAGGAGCAGGAGCACGAATAGAAAGCAGCTCTAT
 
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JMFF011C04+           CAACTGGCGATTGACACCACATTCAGGCCTAAGCTCTGTGGCAGCAGCAACAAATTCTTT
JMFF024M07+                                                GTGGCAGCAGCAACAAATTCTTT
JMFF022J11+           CAACTGGCGATTGACACCACATTCAGGCCTAAGCTCTGTGGCAGCAGCAACAAATTCTTT
JMFF010H15+                                                GTGGCAGCAGCAACAAATTCTTT
JMFS026H08+                                                       CAGCAACAAATTCTTT
                      ____________________________________________________________
consensus             CAACTGGCGATTGACACCACATTCAGGCCTAAGCTCTGTGGCAGCAGCAACAAATTCTTT
 
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JMFF011C04+           TCCATATTTACCAGTAAAAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
JMFF024M07+           TCCATATTTACCAGTAAAAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
JMFF022J11+           TCCATATTTACCAGTAAAAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
JMFF010H15+           TCCATATTTACCAGTAAAAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
JMFF020F07+                                                       GAAGATCGGCACATCT
JMFS026H08+           TCCATATTTACCAGTAACAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
                      ____________________________________________________________
consensus             TCCATATTTACCAGTAAAAGCCAGTTGAACCTGCTGCAACTCTGGAAGATCGGCACATCT
 
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JMFF011C04+           TGGTGCAGCAAAACATACACTGGAAATTGCTTC-TTCAAATCCAGGGGGCATTCCCTTTG
JMFF024M07+           TGGTGCAGCAAAACATACACTGGAAATTGCTTC-TTCAAATCCAGGGGGCATTCCCTTTG
JMFF022J11+           TGGTGCAGCAAAACATACACTGGAAATTGCTTCTTTCAAATCCAGGGGGCATTCCCTTTG
JMFF010H15+           TGGTGCAGCAAAACATACACTGGAAATTGCTTCTTTCAAATCCAGGGGGCATTCCCTTTG
JMFF020F07+           TGGTGCAGCAAAACATACACTGGAAATTGCTTCTTTCAAATCCAGGGGGCATTCCCTTTG
JMFS026H08+           TGGTGCAGCAAAACATACACTGGAAATTGCTTCTTTCAAATCCAGGGGGCATTCCCTTTG
                      ____________________________________________________________
consensus             TGGTGCAGCAAAACATACACTGGAAATTGCTTCTTTCAAATCCAGGGGGCATTCCCTTTG
 
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JMFF011C04+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
JMFF024M07+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
JMFF022J11+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
JMFF010H15+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
JMFF020F07+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
JMFS026H08+           TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
                      ____________________________________________________________
consensus             TGCCTCAATTATTGGAAGACGAACACTTATGAGCTCACAAAATAGCTCAATTATCTCCTG
 
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JMFF011C04+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
JMFF024M07+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
JMFF022J11+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
JMFF010H15+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
JMFF020F07+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
JMFS026H08+           GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
                      ____________________________________________________________
consensus             GGCAGCCATCATTTTCTCCTCTCTTATAATATGCTCCACCCGAATCCGAGCAGTGGCTTC
 
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JMFF011C04+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
JMFF024M07+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
JMFF022J11+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
JMFF010H15+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
JMFF020F07+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
JMFS026H08+           CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
                      ____________________________________________________________
consensus             CTGACCAGTTTCAAGAAGCTTGGCAATTTCTTTCCGCATCTGCTTCAGCTGAATCTCTCT
 
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JMFF011C04+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
JMFF024M07+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
JMFF022J11+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
JMFF010H15+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
JMFF020F07+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
JMFS026H08+           ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
                      ____________________________________________________________
consensus             ACGGTTTCTCAATAGCTTTATCCGAGGGATCGTCAGCTTCAATAGAGTTTTACATTTGGC
 
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JMFF011C04+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
JMFF024M07+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
JMFF022J11+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
JMFF010H15+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
JMFF020F07+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
JMFS026H08+           AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
                      ____________________________________________________________
consensus             AGCTTTGAAGCCTTTGTTGAAGAAGGAATCCATCTCGTTTCTATGAGCGCGTCTTGGAAG
 
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JMFF011C04+           CAAATT                                                      
JMFF024M07+           CAAATT                                                      
JMFF022J11+           CAAATTGGTCAC                                                
JMFF010H15+           CAAATTGGTCACGAAAACTATAGCGATTCAGACTGGTTTATAAGGGAATGATGAGAAACG
JMFF020F07+           CAAATTGGTCACGAAAACTATAGCGATTCAGACTGGTTTATAAGGGAATGATGAGAAACG
JMFS026H08+           CAAATTGGTCACGAAAACTATAGCGATTCAGACTGGTTTATAAGGGAATGATGAGAAACG
                      ____________________________________________________________
consensus             CAAATTGGTCACGAAAACTATAGCGATTCAGACTGGTTTATAAGGGAATGATGAGAAACG
 
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JMFF010H15+           GAGTAGACGCGTCCGACGAAGGTGCCAAC                               
JMFF020F07+           GAGTAGACGCGTCCGACGAAGGTGCCAACAAGAAGAAACGATATGGTGATTAGTGATTAC
JMFS026H08+           GAGTAGACGCGTCCGACGAAGGTGCCAACAAGAAGAAACGATATGGTGATTAGTGATTAC
                      ____________________________________________________________
consensus             GAGTAGACGCGTCCGACGAAGGTGCCAACAAGAAGAAACGATATGGTGATTAGTGATTAC
 
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JMFS026H08+           GACTGCAAGTCCTCAGTTTTCTTACGGCTTAAGGGATCTTTTTTTCAACCCGCCTCTCAA
                      ____________________________________________________________
consensus             GACTGCAAGTCCTCAGTTTTCTTACGGCTTAAGGGATCTTTTTTTCAACCCGCCTCTCAA