Contig 011746:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS022A05Sequence614011746 (3)emb|CDP00309.1|8e-106unnamed protein product [Coffea canephora]
JMFS050H02Sequence513011746 (3)emb|CDP00309.1|2e-83unnamed protein product [Coffea canephora]
JMFS090A02Sequence622011746 (3)ref|XP_011071013.1|2e-65PREDICTED: F-box/kelch-repeat protein SKIP11-like isoform X3 [Sesamum indicum]

Alignment

This contig is upended


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JMFS090A02+                                                        AAAATGTTGGTTTCA
                      ____________________________________________________________
consensus                                                          AAAATGTTGGTTTCA
 
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JMFS090A02+           AGACTCCTTGAAAATAAATATGGTGTCGAATCTTGAGTATACTGATTCCCTGTCCTCCTC
                      ____________________________________________________________
consensus             AGACTCCTTGAAAATAAATATGGTGTCGAATCTTGAGTATACTGATTCCCTGTCCTCCTC
 
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JMFS090A02+           CCTCTGAGAAAAGGAAACTAAAACTTCGAAAGCGAAAAGAAAAAAAAAATAGAAAAGATT
                      ____________________________________________________________
consensus             CCTCTGAGAAAAGGAAACTAAAACTTCGAAAGCGAAAAGAAAAAAAAAATAGAAAAGATT
 
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JMFS090A02+           GGATAAATTACCCATTAGAAACATTCCTTTTGCCCCATTAATCCTATCATGTATGTAAAA
                      ____________________________________________________________
consensus             GGATAAATTACCCATTAGAAACATTCCTTTTGCCCCATTAATCCTATCATGTATGTAAAA
 
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JMFS090A02+           GAGGCATCTTTATCCACATTGTTAGCAACCCATCACCGCGCAATTATAGACAAAGCTACC
                      ____________________________________________________________
consensus             GAGGCATCTTTATCCACATTGTTAGCAACCCATCACCGCGCAATTATAGACAAAGCTACC
 
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JMFS090A02+           CGATGACTTACGCCCGAGCATATTCCACTGTGGCGGTCCTTCGCTGGGGACCCACGAGTT
JMFS050H02+                                                               CACGAGTT
JMFS022A05+                                                               CACGAGTT
                      ____________________________________________________________
consensus             CGATGACTTACGCCCGAGCATATTCCACTGTGGCGGTCCTTCGCTGGGGACCCACGAGTT
 
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JMFS090A02+           CACTTCGATGAATCCTTGACCCACGGTCCTAGGACCCCCGATTACGAGAAGCCTATCGCC
JMFS050H02+           CACTTCGATGAATCCTTGACCCACGGTCCTAGGACCCCCGATTACGAGAAGCCTATCGCC
JMFS022A05+           CACTTCGATGAATCCTTGACCCACGGTCCTAGGACCCCCGATTACGAGAAGCCTATCGCC
                      ____________________________________________________________
consensus             CACTTCGATGAATCCTTGACCCACGGTCCTAGGACCCCCGATTACGAGAAGCCTATCGCC
 
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JMFS090A02+           ACATGCTCGAAAAGCCAAGCCCCAACCGTTCATAGAATTTGCTCGCTCGGGCAATCTTCC
JMFS050H02+           ACATGCTCGAAAAGTCAAGCCCCAACCGTTCATAGAATTTGCTCGCTCGGGCAATCTTCC
JMFS022A05+           ACATGCTCGAAAAGCCAAGCCCCAACCGTTCATAGAATTTGCTCGCTCGGGCAATCTTCC
                      ____________________________________________________________
consensus             ACATGCTCGAAAAGCCAAGCCCCAACCGTTCATAGAATTTGCTCGCTCGGGCAATCTTCC
 
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JMFS090A02+           TTGAGTAACCCACGCCTTTTTGTCCTTGTCGTACCTCCTAACTTCCATGTCAGCATAGTC
JMFS050H02+           TTGAGTAACCCACGCCTTTTTGTCCTTGTCGTACCTCCTAACTTCCATGTCAGCATAGTC
JMFS022A05+           TTGAGTAACCCACGCCTTTTTGTCCTTGTCGTACCTCCTAACTTCCATGTCAGCATAGTC
                      ____________________________________________________________
consensus             TTGAGTAACCCACGCCTTTTTGTCCTTGTCGTACCTCCTAACTTCCATGTCAGCATAGTC
 
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JMFS090A02+           AGCTGCATACAATTGGTTATTTACGACTGCAAGCAAAGGCGGTGCTTCAGCTGTGGCGGG
JMFS050H02+           AGCTGCATACAATTGGTTATTTACGACTGCAAGCAAAGGCGGTGCTTCAGCTGTGGCGGG
JMFS022A05+           AGCTGCATACAATTGGTTATTTACGACTGCAAGCAAAGGCGGTGCTTCAGCTGTGGCGGG
                      ____________________________________________________________
consensus             AGCTGCATACAATTGGTTATTTACGACTGCAAGCAAAGGCGGTGCTTCAGCTGTGGCGGG
 
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JMFS090A02+           CAAGCCGTTTTCCCTAACTGCAGCCATACGCACGGGGGACATGTTGGGTATCTCCGTCCA
JMFS050H02+           CAAGCCGTTTTCCCTAACTGCAGCCATACGCACGGGGGACATGTTGGGTATCTCCGTCCA
JMFS022A05+           CAAGCCGTTTTCCCTAACTGCAGCCATACGCACGGGGGACATGTTGGGTATCTCCGTCCA
                      ____________________________________________________________
consensus             CAAGCCGTTTTCCCTAACTGCAGCCATACGCACGGGGGACATGTTGGGTATCTCCGTCCA
 
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JMFS090A02+           CGTTCT                                                      
JMFS050H02+           CGTTCTTTTCTCGAAATCATATTCCTCCCCGCAAGTCAAAAGCTTCGAATCGGGCCCTCC
JMFS022A05+           CGTTCTTTTCTCGAAATCATATTCCTCCCCGCAAGTCAAAAGCTTCGAATCGGGCCCTCC
                      ____________________________________________________________
consensus             CGTTCTTTTCTCGAAATCATATTCCTCCCCGCAAGTCAAAAGCTTCGAATCGGGCCCTCC
 
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JMFS050H02+           AACGCCTCCCACCACGTAAAACTTTCCATCCATGAGAACCCCGGAGCACATCTTCCTCGC
JMFS022A05+           AACGCCTCCCACCACGTAAAACTTTCCATCCATGAGAACCCCGGAGCACATCTTCCTCGC
                      ____________________________________________________________
consensus             AACGCCTCCCACCACGTAAAACTTTCCATCCATGAGAACCCCGGAGCACATCTTCCTCGC
 
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JMFS050H02+           CTTGTTCATATTTGGCAATAGCGTCCAAGTTCCCGTCTCGGAGTTATAAAGCTCGGCTGA
JMFS022A05+           CTTGTTCATATTTGGCAATAGCGTCCAAGTTCCCGTCTCGGAGTTATAAAGCTCGGCTGA
                      ____________________________________________________________
consensus             CTTGTTCATATTTGGCAATAGCGTCCAAGTTCCCGTCTCGGAGTTATAAAGCTCGGCTGA
 
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JMFS050H02+           GCTAAGGATCTTACCGTGCGAGTCA                                   
JMFS022A05+           GCTAAGGATCTTACCGTGCGAGTCACACCCACCCGCGAAAATCGCTATCTCCCCTTTGCT
                      ____________________________________________________________
consensus             GCTAAGGATCTTACCGTGCGAGTCACACCCACCCGCGAAAATCGCTATCTCCCCTTTGCT
 
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JMFS022A05+           GGAAGAACCGAACAAACACCGTGGCTCTTTCATCTGCATCCCAGACGACCATGAATTGGT
                      ____________________________________________________________
consensus             GGAAGAACCGAACAAACACCGTGGCTCTTTCATCTGCATCCCAGACGACCATGAATTGGT