Contig 011742:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+              AGGAGCCAATATAGGGACATGGGAGTCTCGGGCATTTCTCTTGGCATCAGTTGCAGA
                      ____________________________________________________________
consensus                AGGAGCCAATATAGGGACATGGGAGTCTCGGGCATTTCTCTTGGCATCAGTTGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           GAACACGACATAGACAAGGATGAAGGTTCCAACGATCTCGGCACCAAGCCCATCACCCTT
JMFS019D12+                                 AAGGTTCCAACGATCTCGGCACCAAGCCCATCACCCTT
                      ____________________________________________________________
consensus             GAACACGACATAGACAAGGATGAAGGTTCCAACGATCTCGGCACCAAGCCCATCACCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           GGTGTAGCCATGAGCCACCACGTTGGCCCCTCCGCCATTACTCACATACAGCGATGGCTG
JMFS019D12+           GGTGTAGCCATGAGCCACCACGTTGGCCCCTCCGCCATTACTCACATACAGCGATGGCTG
                      ____________________________________________________________
consensus             GGTGTAGCCATGAGCCACCACGTTGGCCCCTCCGCCATTACTCACATACAGCGATGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           GAAGCCCTTCACCACCCCTGCGCCACAGATGGCTCCTAGGCATTGCATCACAATATAGAA
JMFS019D12+           GAAGCCCTTCACCACCCCTGCGCCACAGATGGCTCCTAGGCATTGCATCACAATATAGAA
                      ____________________________________________________________
consensus             GAAGCCCTTCACCACCCCTGCGCCACAGATGGCTCCTAGGCATTGCATCACAATATAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           AATTGCCCTTGTTAGGGACAATTTCCTTGCCAGAAACAGACCAAATGTTACTGCAGGGTT
JMFS019D12+           AATTGCCCTTGTTAGGGACAATTTCCTTGCCAGAAACAGACCAAATGTTACTGCAGGGTT
                      ____________________________________________________________
consensus             AATTGCCCTTGTTAGGGACAATTTCCTTGCCAGAAACAGACCAAATGTTACTGCAGGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           TATGTGTCCACCTGAGATGCCTGCAGTGCAATAAACGAGTGCAAAGATCATACCCCCAAA
JMFS019D12+           TATGTGTCCACCTGAGATGCCTGCAGTGCAATAAACGAGTGCAAAGATCATACCCCCAAA
                      ____________________________________________________________
consensus             TATGTGTCCACCTGAGATGCCTGCAGTGCAATAAACGAGTGCAAAGATCATACCCCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           AGCCCAAGCAATGCCCTGAACACCAACAGTGTTGCACTTGCTTTTAGACCTAGAGTAACC
JMFS019D12+           AGCCCAAGCAATGCCCTGAACACCAACAGTGTTGCACTTGCTTTTAGACCTAGAGTAACC
                      ____________________________________________________________
consensus             AGCCCAAGCAATGCCCTGAACACCAACAGTGTTGCACTTGCTTTTAGACCTAGAGTAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           CATGACAGTCAAGACAGTGATGTAGAGGAACAAGAAAGTGGCTATGAACTCTGCAATGCC
JMFS019D12+           CATGACAGTCAAGACAGTGATGTAGAGGAACAAGAAAGTGGCTATGAACTCTGCAATGCC
                      ____________________________________________________________
consensus             CATGACAGTCAAGACAGTGATGTAGAGGAACAAGAAAGTGGCTATGAACTCTGCAATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           AGCCCTCCAGAAAGACCATGAGTGCAGCTCCCCAGCCTCAAACAGTGGTGCTGGTGGTGC
JMFS019D12+           AGCCCTCCAGAAAGACCATGAGTGCAGCTCCCCAGCCTCAAACAGTGGTGCTGGTGGTGC
                      ____________________________________________________________
consensus             AGCCCTCCAGAAAGACCATGAGTGCAGCTCCCCAGCCTCAAACAGTGGTGCTGGTGGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           CTCCTTGTAGTCCTTTCCCTGTGCTGAGGTTCCCAATGGCATCCTCTCAGAGAACTTGTT
JMFS019D12+           CTCCTTGTAGTCCTTTCCCTGTGCTGAGGTTCCCAATGGCATCCTCTCAGAGAACTTGTT
                      ____________________________________________________________
consensus             CTCCTTGTAGTCCTTTCCCTGTGCTGAGGTTCCCAATGGCATCCTCTCAGAGAACTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010E15+           TGCTCCCACCATCACATCCTCCTCTTTCCCTTCCA                         
JMFS019D12+           TGCTCCCACCATCACATCCTCCTCTTTCCCTTCCATTCTCTCTGAAGATCTCTGATCTGT
                      ____________________________________________________________
consensus             TGCTCCCACCATCACATCCTCCTCTTTCCCTTCCATTCTCTCTGAAGATCTCTGATCTGT